BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008332
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   141   5e-31
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   140   1e-30
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   133   1e-28
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-27
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...   117   5e-24

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  141 bits (355), Expect = 5e-31
 Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 30/384 (7%)
 Frame = -1

Query: 1285 DLIRFGYVCTPWRSVSAPARHK--GRLPWLIVPV-QPNSTEIENHNDAWMDSFDLFSVLD 1115
            D +RF  VC  WR+      H    +LPWL++P  QP+ T               FS+  
Sbjct: 24   DYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRP-----------FFSLSL 72

Query: 1114 GKSHKMDIPEINGRRIC-GSSNGWLITIHQNSDLHLIHPFSRKVIDLPSLTDFPGVYGIQ 938
             K H + +PE + RR   GSS+GWL+ + +  ++ L++P +R  + LP L+ FP V    
Sbjct: 73   NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFN 132

Query: 937  FSGGQLHYLINHDHLHPSRHHAVLENSLYVRDFLISKAIVSSNSNQIDASFVVMGIAGSS 758
            F+     Y      L  S       +   +RD  I K I+SS+     + F+ + I   +
Sbjct: 133  FADVGREYA-----LRTSSGDVYTRSLKKMRDSFIKKTILSSSPAN-GSDFIAVVILNQT 186

Query: 757  HSLFFHRPMMGDNSWKIIQDANLYV-DVTYYKGQFYAVDSSGSVFV---------VEAIV 608
              L   R    D+SW  ++DA  Y  DV +++G FYAV+  GS+ V         V  I 
Sbjct: 187  GDLALCRK--SDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIE 244

Query: 607  SPRPFTRCIINGTQSDDDLHPMYXXXXXXXXXXXVIQNDKPSELL----VRVLKIDFQKG 440
             P+ F   +    +S ++L                ++ D+ S +      +V ++D +  
Sbjct: 245  MPQQFGGDLQYLVESGEEL----LLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAP 300

Query: 439  QWPLEVQNIGDNALFLGFSHSASISTTEFPGCKGNCIYFS------------GPSLTGIY 296
            +W + V ++GD ALFLG + S S+S+ +FPGCKGNCIY++            G    GI+
Sbjct: 301  RWEV-VSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 359

Query: 295  NLGDCTFETIHPGDSEVKPPRPIW 224
            NL D + E +      ++ P P+W
Sbjct: 360  NLEDGSIEPLPCSHFRIRWPPPLW 383


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  140 bits (352), Expect = 1e-30
 Identities = 112/384 (29%), Positives = 179/384 (46%), Gaps = 30/384 (7%)
 Frame = -1

Query: 1285 DLIRFGYVCTPWRSVSAPARHK--GRLPWLIVPV-QPNSTEIENHNDAWMDSFDLFSVLD 1115
            D +RF  VC  WR+      H    +LPWL++P  QP+ T               FS+  
Sbjct: 24   DYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHTHRP-----------FFSLSL 72

Query: 1114 GKSHKMDIPEINGRRIC-GSSNGWLITIHQNSDLHLIHPFSRKVIDLPSLTDFPGVYGIQ 938
             K H + +PE + RR   GSS+GWL+ + +  ++ L++P +R  + LP L+ FP V    
Sbjct: 73   NKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLSTFPNVVRFN 132

Query: 937  FSGGQLHYLINHDHLHPSRHHAVLENSLYVRDFLISKAIVSSNSNQIDASFVVMGIAGSS 758
            F+     Y      L  S       +   +RD  I K I+SS+     + F+ + I   +
Sbjct: 133  FADVGREYA-----LRTSSGDVYTRSLKKMRDSFIKKTILSSSPAN-GSDFIAVVILNQT 186

Query: 757  HSLFFHRPMMGDNSWKIIQDANLYV-DVTYYKGQFYAVDSSGSVFV---------VEAIV 608
              L   R    D+SW  ++DA  Y  DV +++G FYAV+  GS+ V         V  I 
Sbjct: 187  GDLALCRK--SDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIE 244

Query: 607  SPRPFTRCIINGTQSDDDLHPMYXXXXXXXXXXXVIQNDKPSELL----VRVLKIDFQKG 440
             P+ F   +    +S ++L                ++ D+ S +      +V ++D +  
Sbjct: 245  MPQQFGGDLQYLVESGEEL----LLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAP 300

Query: 439  QWPLEVQNIGDNALFLGFSHSASISTTEFPGCKGNCIYFS------------GPSLTGIY 296
            +W + V ++GD ALFLG + S S+S+ +FPGCKGNCIY++            G    GI+
Sbjct: 301  RWEV-VSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIF 359

Query: 295  NLGDCTFETIHPGDSEVKPPRPIW 224
            NL D + E +      ++ P P+W
Sbjct: 360  NLEDGSIEPLPCSHFRIRWPPPLW 383


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  133 bits (335), Expect = 1e-28
 Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 18/360 (5%)
 Frame = -1

Query: 1264 VCTPWR-SVSAPARH-KGRLPWLIVPVQPNSTEIENHNDAWMDSFDLFSVLDGKSHKMDI 1091
            VC  WR S+     H   +LPWL++P        ++ + +       FS+   K H +++
Sbjct: 32   VCHAWRFSIPKTPNHLPPQLPWLMLP--------QSQSQSNQSRRAFFSLSTNKFHFLNL 83

Query: 1090 PEINGR-RICGSSNGWLITIHQNSDLHLIHPFSRKVIDLPSLTDFPGVYGIQFSGGQLHY 914
            PE++ R R CGSS+GWL+ +     + LI+P +R  + LP L+ FP V    +S     Y
Sbjct: 84   PEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGREY 143

Query: 913  LINHDHLHPSRHHAVLENSLYVRDFLISKAIVSSNSNQIDASFVVMGIAGSSHSLFFHRP 734
             + +          V  +   +RD  I K ++SS+  + D +FVV+ I   +  L + R 
Sbjct: 144  ALRN-----LLGERVTVSLRQMRDSFIRKVVLSSSPLK-DNNFVVIAILNQTDDLAYCRN 197

Query: 733  MMGDNSWKIIQDANLYV-DVTYYKGQFYAVDSSGSVFVVEAIVSPRPFTRCIINGTQSDD 557
              GD SW ++++A  +  DV +  G FYAV+ +G + + + I S  P    +    Q+  
Sbjct: 198  --GDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICD-ISSDSPRVSFMETPRQAGG 254

Query: 556  DLHPMYXXXXXXXXXXXVIQ-------NDKPSELLVR-----VLKIDFQKGQWPLEVQNI 413
            D+  +             +         D    L+ R     V ++D+   QW L +  +
Sbjct: 255  DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQW-LRMSTL 313

Query: 412  GDNALFLGFSHSASISTTEFPGCKGNCIYFSGPSLTGIY--NLGDCTFETIHPGDSEVKP 239
            GD ALF+G + S S+S T+F GC GNCIY++   L   Y  + GD         D  ++P
Sbjct: 314  GDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEP 373


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  127 bits (319), Expect = 7e-27
 Identities = 102/382 (26%), Positives = 182/382 (47%), Gaps = 28/382 (7%)
 Frame = -1

Query: 1285 DLIRFGYVCTPWRSV--SAPARHKGRLPWLIVPVQPNSTEIENHNDAWMDSFDLFSVLDG 1112
            D + F  VC  W+S     P     +LPWL++P      + +++  ++   F+L +    
Sbjct: 25   DYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLP------QSQSNQSSYRAFFNLSTY--- 75

Query: 1111 KSHKMDIPEINGRRI-CGSSNGWLITIHQNSDLHLIHPFSRKVIDLPSLTDFPGVYGIQF 935
            K H +++PE + R+  CGSS+GWLI +  +  + +I+P +R+ I LP+++ FP V    +
Sbjct: 76   KFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIHLPAISSFPNVVSFDY 135

Query: 934  SG-GQLHYLINHDHLHPSRHHAVLENSLYVRDFLISKAIVSSNSNQIDAS-FVVMGIAGS 761
            +  G+ + L+N       R+ A L     +RD  I K ++SS+  +     FV M I  S
Sbjct: 136  ANVGREYLLVNP---QGERNTASLRQ---MRDGFIKKVVMSSSPLEKKGDFFVAMAILCS 189

Query: 760  SHSLFFHRPMMGDNSWKIIQDANLY-VDVTYYKGQFYAVDSSGSVFVVEAIVSPRPFTRC 584
            +  L + +   GD  W I++++  +  DV Y+ G FYAV+ +G + V + +    P    
Sbjct: 190  TGDLAYCK--NGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCD-VNGNSPKVSF 246

Query: 583  IINGTQSDDDLHPMYXXXXXXXXXXXVIQNDKPSELLV------RVLKIDFQKGQWPLEV 422
            I    Q   D+  +             +  D   ++ +       V K+D    +W   V
Sbjct: 247  IETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWE-RV 305

Query: 421  QNIGDNALFLGFSHSASISTTEFPGCKGNCIYFS------------GPSLTGIYNLGDCT 278
             ++GD  LF+G + S ++S +   GC G+CIY++            G    GI+ L D +
Sbjct: 306  TSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGS 365

Query: 277  FETI--HPGD--SEVKPPRPIW 224
             E +  +P +  S ++ P P+W
Sbjct: 366  IEPLPCYPRNSYSRLQWPPPLW 387


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
            gi|449485151|ref|XP_004157083.1| PREDICTED: F-box protein
            SKIP23-like [Cucumis sativus]
          Length = 392

 Score =  117 bits (294), Expect = 5e-24
 Identities = 110/369 (29%), Positives = 166/369 (44%), Gaps = 29/369 (7%)
 Frame = -1

Query: 1285 DLIRFGYVCTPWR-SV-SAPARHKGRLPWLIVPVQPNSTEIENHNDAWMDSFDLFSVLDG 1112
            D +RF  VC  WR SV   P R   +LP LI+P+  N                LF+  D 
Sbjct: 24   DYLRFRVVCWNWRFSVPKIPHRLPPQLPCLIIPLYHNCR------------CGLFNFSDN 71

Query: 1111 KSHKMDIPEINGR-RICGSSNGWLITIHQNSDLHLIHPFSRKVIDLPSLTDFPGVYGIQF 935
            K H + +PEI+ R R CGSS+GWL  + +   + L++PF+R  + LP L+ FP V    +
Sbjct: 72   KIHFLYLPEISLRKRPCGSSHGWLTIVDETPPILLLNPFTRAKLWLPPLSTFPNVVSFDY 131

Query: 934  SGGQLHYLINHDHLHPSRHHAVLENSLYVRDFLISKAIVSSN-SNQIDASFVVMGIAGSS 758
            S     YLI          H    N   +RD  + K ++SS+ SN  D  F+ + I   S
Sbjct: 132  SRVGREYLI-----RTPTGHIYTRNLRQMRDSFVKKIVLSSSPSNPND--FLAVAILNHS 184

Query: 757  HSLFFHRPMMGDNSWKIIQDA-NLYVDVTYYKGQFYAVDSSGSVFVVEAIVSPRPFTRCI 581
              L F R   G  SW  + DA +   DV Y  G FYAVD  G V +++ +   R     +
Sbjct: 185  GDLAFCR--SGGGSWTFVDDAPSDCEDVIYSDGVFYAVDKYGVVSLMD-LRGSRSQVSLV 241

Query: 580  INGTQSDDDLHPM--YXXXXXXXXXXXVIQNDKPSELLV---------RVLKIDFQKGQW 434
                Q   D+  +               I ND   + L+          V +++++  +W
Sbjct: 242  ATERQLAGDIQYLVKLGQELLLVSRYLDIVNDGMEDELIPVMYRTVRFEVFRMEWEGPRW 301

Query: 433  PLEVQNIGDNALFLGFSHSASISTTEFPGCKGNCIYFSG-------------PSLTGIYN 293
              +V+N+ + ALF+G + S + S  +F    GNCIY++              P + GI+ 
Sbjct: 302  E-KVENLNEMALFVGGNSSMAFSAADFGEISGNCIYYTDDYSDSDYQEQGEEPDM-GIFR 359

Query: 292  LGDCTFETI 266
            L D +FE +
Sbjct: 360  LCDESFEPL 368