BLASTX nr result

ID: Cimicifuga21_contig00008303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008303
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241...   128   2e-27
emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]   128   2e-27
ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arab...   122   8e-26
ref|NP_566809.1| ribosomal protein S21 family protein [Arabidops...   121   2e-25
gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|186553...   121   2e-25

>ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera]
          Length = 188

 Score =  128 bits (321), Expect = 2e-27
 Identities = 79/193 (40%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
 Frame = -1

Query: 811 LSMAAASSICNFLSFLLPAQQSQPKKPQNQL------AXXXXXXXXXXXXXXXXXDRRKK 650
           ++ +++SSI NFLSF+LP++   PK P          A                  R  +
Sbjct: 1   MAASSSSSISNFLSFILPSKPPLPKTPPPNFISPSPHADPLPTLSVSAPPPSQFDARTPR 60

Query: 649 DGLVPIMADDGSFSSKDLMSVVCPSLAYSNTLFFKSAYNVQVIVGEDXXXXXXXXXXXXX 470
           DGL+         SS DLM+VVCPSLAYSNTLFFKSAYNVQVIV ++             
Sbjct: 61  DGLLQ------HSSSSDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRRE 114

Query: 469 VMKAGVIQECKRRRFFENSQEEKKRRVRDAAKRNKXXXXXXXPVVE--TKDAAKSRSXXX 296
           VM+AGVIQECKRRRFFEN Q+EKKR+ R+AAKRN+          +   ++ +K++    
Sbjct: 115 VMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDD 174

Query: 295 XXXXXDLPVGNMP 257
                ++P G +P
Sbjct: 175 EEDNWEVPEGELP 187


>emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]
          Length = 188

 Score =  128 bits (321), Expect = 2e-27
 Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
 Frame = -1

Query: 811 LSMAAASSICNFLSFLLPAQQSQPKKPQNQL------AXXXXXXXXXXXXXXXXXDRRKK 650
           ++ +++SSI NFLSFLLP+    PK P          A                  R  +
Sbjct: 1   MAASSSSSISNFLSFLLPSXPXLPKTPPPNFISPPPHADPLPTLSVSAPPPSQFDARTPR 60

Query: 649 DGLVPIMADDGSFSSKDLMSVVCPSLAYSNTLFFKSAYNVQVIVGEDXXXXXXXXXXXXX 470
           DGL+         SS DLM+VVCPSLAYSNTLFFKSAYNVQVIV ++             
Sbjct: 61  DGLLQ------HSSSSDLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRRE 114

Query: 469 VMKAGVIQECKRRRFFENSQEEKKRRVRDAAKRNKXXXXXXXPVVE--TKDAAKSRSXXX 296
           VM+AGVIQECKRRRFFEN Q+EKKR+ R+AAKRN+          +   ++ +K++    
Sbjct: 115 VMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRRRRPQSRFSTQDSKQEGSKNKKDDD 174

Query: 295 XXXXXDLPVGNMP 257
                ++P G +P
Sbjct: 175 EEDNWEVPEGELP 187


>ref|XP_002875359.1| hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp.
           lyrata] gi|297321197|gb|EFH51618.1| hypothetical protein
           ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score =  122 bits (307), Expect = 8e-26
 Identities = 79/195 (40%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
 Frame = -1

Query: 805 MAAASSICNFLSFLLPAQ-QSQPKKPQNQLAXXXXXXXXXXXXXXXXXDRRKKDGLVPIM 629
           MAA+ S+ +F+SF+ P + Q++P  P N                     RR+ D  +  M
Sbjct: 1   MAASFSLTSFISFISPFKSQTKPTPPPN-----------LTLPSPTISQRRRNDLAIESM 49

Query: 628 ADDGSFS-----SKDLMSVVCPSLAYSNTLFFKSAYNVQVIVGEDXXXXXXXXXXXXXVM 464
           + D S S     S +L SV+CPSLAYSNTLFF S YNVQV V ++             VM
Sbjct: 50  SVDESSSTASSISSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVM 109

Query: 463 KAGVIQECKRRRFFENSQEEKKRRVRDAAKRNKXXXXXXXPVVETKD-----AAKSRSXX 299
           + GVIQECKRRR+FEN Q+EKKRR RDAAKRNK          ET++     A KS+   
Sbjct: 110 RTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAAATKSKKKD 169

Query: 298 XXXXXXDLPVGNMPA 254
                 ++P G++P+
Sbjct: 170 EEEDNWEMPGGDVPS 184


>ref|NP_566809.1| ribosomal protein S21 family protein [Arabidopsis thaliana]
           gi|9294081|dbj|BAB01933.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643753|gb|AEE77274.1|
           ribosomal protein S21 family protein [Arabidopsis
           thaliana]
          Length = 183

 Score =  121 bits (304), Expect = 2e-25
 Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
 Frame = -1

Query: 805 MAAASSICNFLSFLLPAQ-QSQPKKPQNQLAXXXXXXXXXXXXXXXXXDRRKKDGLVPIM 629
           MAA+ S+ +F+SF+ P + Q++P  P N                     RR+ D  +  M
Sbjct: 1   MAASFSLTSFISFISPFKSQTKPTPPPN-----------LTLPSPTISQRRRNDLAIESM 49

Query: 628 ADDGSFS-----SKDLMSVVCPSLAYSNTLFFKSAYNVQVIVGEDXXXXXXXXXXXXXVM 464
           A + + S     S +L SV+CPSLAYSNTLFF S YNVQV V ++             VM
Sbjct: 50  AVEETSSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVM 109

Query: 463 KAGVIQECKRRRFFENSQEEKKRRVRDAAKRNKXXXXXXXPVVETKD----AAKSRSXXX 296
           + GVIQECKRRR+FEN Q+EKKRR RDAAKRNK          ET++    A KS+    
Sbjct: 110 RTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDE 169

Query: 295 XXXXXDLPVGNMPA 254
                ++P G++P+
Sbjct: 170 EEDNWEMPGGDVPS 183


>gb|AAK64005.1| AT3g27160/MYF5_3 [Arabidopsis thaliana] gi|18655399|gb|AAL76155.1|
           AT3g27160/MYF5_3 [Arabidopsis thaliana]
          Length = 183

 Score =  121 bits (304), Expect = 2e-25
 Identities = 78/194 (40%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
 Frame = -1

Query: 805 MAAASSICNFLSFLLPAQ-QSQPKKPQNQLAXXXXXXXXXXXXXXXXXDRRKKDGLVPIM 629
           MAA+ S+ +F+SF+ P + Q++P  P N                     RR+ D  +  M
Sbjct: 1   MAASFSLTSFISFISPFKSQTKPTPPPN-----------LTLPSPTISQRRRNDLAIESM 49

Query: 628 ADDGSFS-----SKDLMSVVCPSLAYSNTLFFKSAYNVQVIVGEDXXXXXXXXXXXXXVM 464
           A + + S     S +L SV+CPSLAYSNTLFF S YNVQV V ++             VM
Sbjct: 50  AVEETSSTASSLSSELASVICPSLAYSNTLFFSSGYNVQVFVEDNESEERLVNRFRREVM 109

Query: 463 KAGVIQECKRRRFFENSQEEKKRRVRDAAKRNKXXXXXXXPVVETKD----AAKSRSXXX 296
           + GVIQECKRRR+FEN Q+EKKRR RDAAKRNK          ET++    A KS+    
Sbjct: 110 RTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREEAAAATKSKKKDE 169

Query: 295 XXXXXDLPVGNMPA 254
                ++P G++P+
Sbjct: 170 EKDNWEMPGGDVPS 183


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