BLASTX nr result

ID: Cimicifuga21_contig00008297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008297
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077913.1| uncharacterized protein [Arabidopsis thalian...    64   2e-08
ref|NP_028490.1| uncharacterized protein [Arabidopsis thaliana] ...    64   2e-08
ref|NP_028489.2| uncharacterized protein [Arabidopsis thaliana] ...    62   5e-08
gb|AAD08937.2| unknown protein [Arabidopsis thaliana]                  62   5e-08
ref|XP_002884151.1| hypothetical protein ARALYDRAFT_480770 [Arab...    61   8e-08

>ref|NP_001077913.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330251700|gb|AEC06794.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 241

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
 Frame = -2

Query: 437 WMLSVVISVLEDCFGLQALGKAEEXXXXXXXXXXXLTFGFMILSAPIALLSMINQSQRIV 258
           W LS+VIS+LE+ +G QALGKA +           L   F +L++ +A +  +    R +
Sbjct: 124 WNLSMVISILEESYGFQALGKAAKIVKGMKTKLFLLNLFFGLLASGLAQILQLINMGRSL 183

Query: 257 AIQFLVMFVTFSLSILVQMSVTMTYTVFYFECKQSHGEQGE-IEEMGYSKVSS 102
           A+     FV   L   V+M   +TYTV YF+CK   G   E + ++ Y  +SS
Sbjct: 184 AVTLTTGFVLVCLVFAVRMFQLVTYTVAYFQCKSLQGRDVESLRDVEYMALSS 236


>ref|NP_028490.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4185135|gb|AAD08938.1| expressed protein [Arabidopsis
           thaliana] gi|330251699|gb|AEC06793.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 322

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
 Frame = -2

Query: 437 WMLSVVISVLEDCFGLQALGKAEEXXXXXXXXXXXLTFGFMILSAPIALLSMINQSQRIV 258
           W LS+VIS+LE+ +G QALGKA +           L   F +L++ +A +  +    R +
Sbjct: 205 WNLSMVISILEESYGFQALGKAAKIVKGMKTKLFLLNLFFGLLASGLAQILQLINMGRSL 264

Query: 257 AIQFLVMFVTFSLSILVQMSVTMTYTVFYFECKQSHGEQGE-IEEMGYSKVSS 102
           A+     FV   L   V+M   +TYTV YF+CK   G   E + ++ Y  +SS
Sbjct: 265 AVTLTTGFVLVCLVFAVRMFQLVTYTVAYFQCKSLQGRDVESLRDVEYMALSS 317


>ref|NP_028489.2| uncharacterized protein [Arabidopsis thaliana]
           gi|330251698|gb|AEC06792.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 287

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/112 (33%), Positives = 58/112 (51%)
 Frame = -2

Query: 437 WMLSVVISVLEDCFGLQALGKAEEXXXXXXXXXXXLTFGFMILSAPIALLSMINQSQRIV 258
           W LS+VIS+LED +G+QALGKA +           L   F +LS  +  +  +       
Sbjct: 169 WNLSMVISILEDTYGIQALGKAAKIVKGMKPKLFLLNLFFGLLSFGLVQILRLVDWSSSF 228

Query: 257 AIQFLVMFVTFSLSILVQMSVTMTYTVFYFECKQSHGEQGEIEEMGYSKVSS 102
           ++      V  S   +V+M   +TYTV YF+CK   G Q  + ++ Y+K+SS
Sbjct: 229 SVTLTTGLVLMSSVFVVRMFQLVTYTVAYFQCKSLQG-QDSLRDVEYTKLSS 279


>gb|AAD08937.2| unknown protein [Arabidopsis thaliana]
          Length = 249

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/112 (33%), Positives = 58/112 (51%)
 Frame = -2

Query: 437 WMLSVVISVLEDCFGLQALGKAEEXXXXXXXXXXXLTFGFMILSAPIALLSMINQSQRIV 258
           W LS+VIS+LED +G+QALGKA +           L   F +LS  +  +  +       
Sbjct: 131 WNLSMVISILEDTYGIQALGKAAKIVKGMKPKLFLLNLFFGLLSFGLVQILRLVDWSSSF 190

Query: 257 AIQFLVMFVTFSLSILVQMSVTMTYTVFYFECKQSHGEQGEIEEMGYSKVSS 102
           ++      V  S   +V+M   +TYTV YF+CK   G Q  + ++ Y+K+SS
Sbjct: 191 SVTLTTGLVLMSSVFVVRMFQLVTYTVAYFQCKSLQG-QDSLRDVEYTKLSS 241


>ref|XP_002884151.1| hypothetical protein ARALYDRAFT_480770 [Arabidopsis lyrata subsp.
           lyrata] gi|297329991|gb|EFH60410.1| hypothetical protein
           ARALYDRAFT_480770 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = -2

Query: 437 WMLSVVISVLEDCFGLQALGKAEEXXXXXXXXXXXLTFGFMILS-APIALLSMINQSQRI 261
           W LS+VIS+LED +G+QALGKA +           L   F +LS   + +L +I+ S   
Sbjct: 169 WNLSMVISILEDTYGIQALGKAAKIVKGMKPKLFLLNLFFGLLSFGLVQILRLIDWSSSF 228

Query: 260 VAIQFLVMFVTFSLSILVQMSVTMTYTVFYFECKQSHGEQ-GEIEEMGYSKVSS 102
            ++      V  S   +V+M   +TYTV YF+CK   G+    + ++ Y+K+SS
Sbjct: 229 -SVTLTTSLVLVSSVFVVRMFQLVTYTVAYFQCKSLQGKDVDSLRDVEYTKLSS 281


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