BLASTX nr result

ID: Cimicifuga21_contig00008255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008255
         (1321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307602.1| homocysteine s-methyltransferase [Populus tr...   508   e-141
ref|XP_002300824.1| homocysteine s-methyltransferase [Populus tr...   505   e-141
ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyl...   497   e-138
ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase ...   495   e-137
ref|XP_003554264.1| PREDICTED: selenocysteine methyltransferase-...   484   e-134

>ref|XP_002307602.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222857051|gb|EEE94598.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 341

 Score =  508 bits (1309), Expect = e-141
 Identities = 248/333 (74%), Positives = 283/333 (84%)
 Frame = +3

Query: 78   MGFGTVDPSSEMADFIRQAGGCLVIDGGFATELERHGADLNDPLWSAKCLISSLHLIKTV 257
            MG    + SS M DF+RQ+GG  +IDGG ATELERHGADLNDPLWSAKCL++S HL++ V
Sbjct: 1    MGHPAAETSSFMTDFLRQSGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVREV 60

Query: 258  HLDYLEAGADIILTASYQATIQGFESKGLSRKESEALLQVSVKIACEARDTYYERCAEHF 437
            HLDYLEAGADII+TASYQATIQGFE+KG S +ESE+LL+ SVKIACEARD YY+RC +  
Sbjct: 61   HLDYLEAGADIIITASYQATIQGFEAKGFSGEESESLLRKSVKIACEARDIYYDRCQKGS 120

Query: 438  SDGITNGKNLKQRPILVAASVGSYGAYLADGSEYHGNYGDAVTLTTLKDFHRRRVQILAE 617
             D   NG+ LKQRPILVAAS+GSYGAYLADGSEY GNYGDA+TL TLKDFHRRRVQILAE
Sbjct: 121  PDS-NNGRVLKQRPILVAASIGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAE 179

Query: 618  SGPDLIAFETIPNKXXXXXXXXXXXXDDIDIPAWFAFNSKDGVNVVSGDSLTECASIADS 797
            SG DLIAFET+PNK            +DI IPAWF+FNSKDGVNVVSGDSL +CASIA+S
Sbjct: 180  SGADLIAFETVPNKVEAQAYVELLKEEDIKIPAWFSFNSKDGVNVVSGDSLLDCASIAES 239

Query: 798  CKKVIAVGINCTPPRFIRGLILSIKKVTTKPILIYPNSGETYDPELKQWVQSTGVSVEDF 977
            C+ V+AVGINCTPPRFI GLILSIKKVTTKPILIYPNSGE+YD + K+WVQ+TG+S +DF
Sbjct: 240  CQNVVAVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDGKRKEWVQNTGISDQDF 299

Query: 978  VSYVNNWHECGASLIGGCCRTTPDTIRAIYKVL 1076
            VSYVN W E GA+L+GGCCRTTP+TIRAIY+ L
Sbjct: 300  VSYVNKWCEIGAALVGGCCRTTPNTIRAIYRTL 332


>ref|XP_002300824.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222842550|gb|EEE80097.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 332

 Score =  505 bits (1301), Expect = e-141
 Identities = 245/322 (76%), Positives = 275/322 (85%)
 Frame = +3

Query: 111  MADFIRQAGGCLVIDGGFATELERHGADLNDPLWSAKCLISSLHLIKTVHLDYLEAGADI 290
            M DF+RQ+GG  +IDGG ATELERHGADLNDPLWSAKCL++S HL++ VHLDYLEAGADI
Sbjct: 1    MTDFLRQSGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVRAVHLDYLEAGADI 60

Query: 291  ILTASYQATIQGFESKGLSRKESEALLQVSVKIACEARDTYYERCAEHFSDGITNGKNLK 470
            I+TASYQATIQGFE+KG SR++SEALL+ SV+IACEARD YY RC E   DG  +G+ LK
Sbjct: 61   IITASYQATIQGFEAKGFSREDSEALLRKSVEIACEARDIYYGRCREGSPDGSDDGRVLK 120

Query: 471  QRPILVAASVGSYGAYLADGSEYHGNYGDAVTLTTLKDFHRRRVQILAESGPDLIAFETI 650
             RPILVAASVGSYGAYLADGSEY GNYGDA+TL TLKDFHRRRVQILAESG DLIAFET+
Sbjct: 121  HRPILVAASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETV 180

Query: 651  PNKXXXXXXXXXXXXDDIDIPAWFAFNSKDGVNVVSGDSLTECASIADSCKKVIAVGINC 830
            PNK            +DI IPAWF+FNSKDG+NVVSGDSL ECASIA+SCK  +AVGINC
Sbjct: 181  PNKVEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECASIAESCKNAVAVGINC 240

Query: 831  TPPRFIRGLILSIKKVTTKPILIYPNSGETYDPELKQWVQSTGVSVEDFVSYVNNWHECG 1010
            TPPRFI  LILSIKKVTTKPILIYPNSGE+YD + K+WVQ+TG+S +DFVSYVN W E G
Sbjct: 241  TPPRFIHELILSIKKVTTKPILIYPNSGESYDGDRKEWVQNTGISDQDFVSYVNKWCEIG 300

Query: 1011 ASLIGGCCRTTPDTIRAIYKVL 1076
            A+L+GGCCRTTP TIRAIYK L
Sbjct: 301  AALVGGCCRTTPHTIRAIYKTL 322


>ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
            [Ricinus communis] gi|223535926|gb|EEF37585.1|
            5-methyltetrahydrofolate:homocysteine methyltransferase,
            putative [Ricinus communis]
          Length = 343

 Score =  497 bits (1280), Expect = e-138
 Identities = 241/327 (73%), Positives = 280/327 (85%)
 Frame = +3

Query: 96   DPSSEMADFIRQAGGCLVIDGGFATELERHGADLNDPLWSAKCLISSLHLIKTVHLDYLE 275
            +PSS M DF++Q+GG  VIDGG ATELERHGADLNDPLWSAKCL++S HLI+ VHLDYLE
Sbjct: 8    NPSSLMTDFLKQSGGVAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRMVHLDYLE 67

Query: 276  AGADIILTASYQATIQGFESKGLSRKESEALLQVSVKIACEARDTYYERCAEHFSDGITN 455
            AGADII+TASYQATIQGFE+KG S  ESEALL+ SV+IACEAR+ Y+++C     D   +
Sbjct: 68   AGADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAGACDDNND 127

Query: 456  GKNLKQRPILVAASVGSYGAYLADGSEYHGNYGDAVTLTTLKDFHRRRVQILAESGPDLI 635
            G+ LK+RPILVAASVGSYGAYLADGSEY G+YG+AVTL TLKDFHRRRVQ+LAE+G DLI
Sbjct: 128  GRVLKKRPILVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLAEAGADLI 187

Query: 636  AFETIPNKXXXXXXXXXXXXDDIDIPAWFAFNSKDGVNVVSGDSLTECASIADSCKKVIA 815
            AFET+PN+            +DI +PAWF+FNSKDG+NVVSGDSL ECASIA+SC+KVIA
Sbjct: 188  AFETVPNRVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAESCRKVIA 247

Query: 816  VGINCTPPRFIRGLILSIKKVTTKPILIYPNSGETYDPELKQWVQSTGVSVEDFVSYVNN 995
            VGINCTPP FI GLILSIKKVT+KPILIYPNSGE+YD + K+WVQ+TGV+ EDFVSYVN 
Sbjct: 248  VGINCTPPSFIHGLILSIKKVTSKPILIYPNSGESYDADRKEWVQNTGVTDEDFVSYVNK 307

Query: 996  WHECGASLIGGCCRTTPDTIRAIYKVL 1076
            W E GASL+GGCCRTTP+TIRAIY+ L
Sbjct: 308  WCEVGASLVGGCCRTTPNTIRAIYRTL 334


>ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase 2-like [Vitis vinifera]
          Length = 335

 Score =  495 bits (1274), Expect = e-137
 Identities = 247/333 (74%), Positives = 277/333 (83%)
 Frame = +3

Query: 78   MGFGTVDPSSEMADFIRQAGGCLVIDGGFATELERHGADLNDPLWSAKCLISSLHLIKTV 257
            MG   + PSS ++DF+ Q GG  VIDGG ATELERHGADLNDPLWSAKCL+SS HLI+TV
Sbjct: 1    MGHVDLQPSSFISDFLLQTGGVAVIDGGLATELERHGADLNDPLWSAKCLLSSPHLIRTV 60

Query: 258  HLDYLEAGADIILTASYQATIQGFESKGLSRKESEALLQVSVKIACEARDTYYERCAEHF 437
            HLDYLEAGADII+TASYQATIQGFE++G SR ESEALL+ SV+IACEAR  YY+R     
Sbjct: 61   HLDYLEAGADIIITASYQATIQGFEARGFSRGESEALLRKSVEIACEARKMYYDRY---- 116

Query: 438  SDGITNGKNLKQRPILVAASVGSYGAYLADGSEYHGNYGDAVTLTTLKDFHRRRVQILAE 617
                  G+ LK RPILVAASVGSYGAYLADGSEY G YGD +T+ TLKDFHRRRVQILA+
Sbjct: 117  ------GRILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILAD 170

Query: 618  SGPDLIAFETIPNKXXXXXXXXXXXXDDIDIPAWFAFNSKDGVNVVSGDSLTECASIADS 797
            +G DLIAFET+PNK            ++I IPAWF+FNSKDGV+VVSGDSL EC SIA+S
Sbjct: 171  AGADLIAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVSIAES 230

Query: 798  CKKVIAVGINCTPPRFIRGLILSIKKVTTKPILIYPNSGETYDPELKQWVQSTGVSVEDF 977
            CKKV++VGINCTPPRFI GLILSIKKVTTKPILIYPNSGE+YDPE K+WVQ TGVSVEDF
Sbjct: 231  CKKVVSVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDPEQKEWVQKTGVSVEDF 290

Query: 978  VSYVNNWHECGASLIGGCCRTTPDTIRAIYKVL 1076
            VSYVN W E GASL+GGCCRTTP+TIRAIY+ L
Sbjct: 291  VSYVNKWCEVGASLVGGCCRTTPNTIRAIYRTL 323


>ref|XP_003554264.1| PREDICTED: selenocysteine methyltransferase-like [Glycine max]
          Length = 333

 Score =  484 bits (1247), Expect = e-134
 Identities = 240/326 (73%), Positives = 273/326 (83%), Gaps = 1/326 (0%)
 Frame = +3

Query: 102  SSEMADFIRQAGGCLVIDGGFATELERHGADLNDPLWSAKCLISSLHLIKTVHLDYLEAG 281
            SS + D +RQ GG  VIDGG ATELERHGADLNDPLWSAKCL S  HLI+ VHLDYLE G
Sbjct: 2    SSLITDLLRQTGGTAVIDGGLATELERHGADLNDPLWSAKCLFSFPHLIRQVHLDYLENG 61

Query: 282  ADIILTASYQATIQGFESKGLSRKESEALLQVSVKIACEARDTYYERCAEHFS-DGITNG 458
            ADII+TASYQATIQGF++KG S +ESEALL+ SV+IA EAR+ YY+ CA   S DG  +G
Sbjct: 62   ADIIITASYQATIQGFKAKGYSDEESEALLRSSVEIAREAREVYYKNCAGCRSGDGDDDG 121

Query: 459  KNLKQRPILVAASVGSYGAYLADGSEYHGNYGDAVTLTTLKDFHRRRVQILAESGPDLIA 638
            + LKQRPILVAASVGSYGAYLADGSEY G+YGDA+T+ TLKDFHRRRVQILA+SG DL+A
Sbjct: 122  RILKQRPILVAASVGSYGAYLADGSEYSGDYGDAITVETLKDFHRRRVQILADSGADLLA 181

Query: 639  FETIPNKXXXXXXXXXXXXDDIDIPAWFAFNSKDGVNVVSGDSLTECASIADSCKKVIAV 818
            FET+PNK            +DI IPAWF+FNSKDGVNVVSGDSL EC SIA+SC KV+AV
Sbjct: 182  FETVPNKLEAEAYAQLLEEEDIKIPAWFSFNSKDGVNVVSGDSLMECGSIAESCNKVVAV 241

Query: 819  GINCTPPRFIRGLILSIKKVTTKPILIYPNSGETYDPELKQWVQSTGVSVEDFVSYVNNW 998
            GINCTPPRFI GLI+ +KKVTTKPI+IYPNSGETYD +LK+WVQ+TGV+ EDF+SYVN W
Sbjct: 242  GINCTPPRFIHGLIVLLKKVTTKPIVIYPNSGETYDADLKEWVQNTGVTDEDFISYVNKW 301

Query: 999  HECGASLIGGCCRTTPDTIRAIYKVL 1076
             E GASL+GGCCRTTPDTIR IY+ L
Sbjct: 302  CELGASLVGGCCRTTPDTIRKIYRTL 327


Top