BLASTX nr result

ID: Cimicifuga21_contig00008251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008251
         (1611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513045.1| conserved hypothetical protein [Ricinus comm...   578   e-162
ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244...   561   e-157
ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250...   556   e-156
emb|CBI24243.3| unnamed protein product [Vitis vinifera]              551   e-154

>ref|XP_002513045.1| conserved hypothetical protein [Ricinus communis]
            gi|223548056|gb|EEF49548.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 361

 Score =  578 bits (1489), Expect = e-162
 Identities = 269/361 (74%), Positives = 303/361 (83%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1375 IGRASPXXXXXXXXXXXFATYNLITLVIHNRSSGSEHDSSGRGSLFRDPITHMPEHVKQ- 1199
            +GRASP           FATYNL+T+++HNRS G        G +F DP+  MPE  K+ 
Sbjct: 1    MGRASPLLLILLVLGFFFATYNLVTMIMHNRSVGKRIHDDSDGGIFFDPVIEMPEDAKKS 60

Query: 1198 ENPRLPFHVALTATDAPYNKWQCRIMYYWYKRVKDMPGSEMGGFTRVLHSGSPDNLMDEI 1019
            +N R+PFHVALTATDAPY+KWQCRIMYYWYK+ KD+PGS++GGFTR+LHSG+PDNLMDEI
Sbjct: 61   KNARMPFHVALTATDAPYSKWQCRIMYYWYKQKKDLPGSDLGGFTRILHSGNPDNLMDEI 120

Query: 1018 PTYVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVKPLPNLARGGY 839
            PT+VVDPLPAGLDRGYIVLNRPWAFVQWL+KATIEEEYILMAEPDHIF+ PLPNLA GGY
Sbjct: 121  PTFVVDPLPAGLDRGYIVLNRPWAFVQWLKKATIEEEYILMAEPDHIFINPLPNLAHGGY 180

Query: 838  PAAFPFFYIKPAENEKLIRKYYPEEKGPVTNIDPIGNSPVIIKKSVLEKIAPTWMNVSIR 659
            PAAFPFFYIKPAENE ++RK+YP EKGPVTN+DPIGNSPVIIKK +LEKIAPTWMNVS++
Sbjct: 181  PAAFPFFYIKPAENENIVRKFYPAEKGPVTNVDPIGNSPVIIKKELLEKIAPTWMNVSLK 240

Query: 658  MKNDPETDKTFGWVLEMYGYAVASALHDVQHILRKDFMIQPPWDREVGKNFIIHYTYGCD 479
            MKND ETDKTFGWVLEMY YAVASALH VQHILRKDFM+QPPWD E+GK FIIHYTYGCD
Sbjct: 241  MKNDQETDKTFGWVLEMYAYAVASALHGVQHILRKDFMLQPPWDLEIGKKFIIHYTYGCD 300

Query: 478  YSLKGELTYGKFGDWRFDKRSFXXXXXXXXXXXXXXXXPESVVTLVKKINEATASIPGWE 299
            Y+LKGELTYGK G+WRFDKRS+                PESVVTLVK +NEATA+IP WE
Sbjct: 301  YNLKGELTYGKIGEWRFDKRSYLRGPPPKNLPLPPPGVPESVVTLVKMVNEATANIPNWE 360

Query: 298  T 296
            T
Sbjct: 361  T 361


>ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|222846460|gb|EEE84007.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  566 bits (1459), Expect = e-159
 Identities = 264/362 (72%), Positives = 300/362 (82%), Gaps = 1/362 (0%)
 Frame = -3

Query: 1375 IGRASPXXXXXXXXXXXFATYNLITLVIHNRSSGSEHDSSGRGSLFRDPITHMPEHVKQ- 1199
            +GRAS            FATYNL+ +++H RS G        G +F DP+T MPE VK+ 
Sbjct: 1    MGRASLLVLILLTIGFFFATYNLVAMIMHYRSIGKWAHDDSDGQIFLDPVTEMPEDVKKA 60

Query: 1198 ENPRLPFHVALTATDAPYNKWQCRIMYYWYKRVKDMPGSEMGGFTRVLHSGSPDNLMDEI 1019
            +N ++PFHVALTATDAPY+KWQCRIMYYWYK+ KD+PGSEMGGFTR+LHSG PDNLMDEI
Sbjct: 61   KNAKMPFHVALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGKPDNLMDEI 120

Query: 1018 PTYVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVKPLPNLARGGY 839
            PT VVDPLPAGLD+GY+VLNRPWAFVQWLEKA+IEEEYILMAEPDH+F+ PLPNLARGG 
Sbjct: 121  PTTVVDPLPAGLDQGYVVLNRPWAFVQWLEKASIEEEYILMAEPDHVFINPLPNLARGGL 180

Query: 838  PAAFPFFYIKPAENEKLIRKYYPEEKGPVTNIDPIGNSPVIIKKSVLEKIAPTWMNVSIR 659
            PAAFPFFYIKPA++E +IRKYYPEEKGPVTN+DPIGNSPVIIKK +LEKIAPTWMN+S++
Sbjct: 181  PAAFPFFYIKPADHESIIRKYYPEEKGPVTNVDPIGNSPVIIKKELLEKIAPTWMNISLK 240

Query: 658  MKNDPETDKTFGWVLEMYGYAVASALHDVQHILRKDFMIQPPWDREVGKNFIIHYTYGCD 479
            MK D ETDK FGWVLEMY YAVASALHDVQHILRKDFM+QPPWD   GKNFIIHYTYGCD
Sbjct: 241  MKRDQETDKAFGWVLEMYAYAVASALHDVQHILRKDFMVQPPWDLATGKNFIIHYTYGCD 300

Query: 478  YSLKGELTYGKFGDWRFDKRSFXXXXXXXXXXXXXXXXPESVVTLVKKINEATASIPGWE 299
            Y+LKGELTYGK G+WRFDKRS+                PESVVTLVK +NEATA+IP W+
Sbjct: 301  YNLKGELTYGKIGEWRFDKRSYLGGPMPRNLALPPRGVPESVVTLVKMVNEATANIPNWD 360

Query: 298  TD 293
            T+
Sbjct: 361  TE 362


>ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera]
          Length = 362

 Score =  561 bits (1447), Expect = e-157
 Identities = 264/361 (73%), Positives = 299/361 (82%), Gaps = 1/361 (0%)
 Frame = -3

Query: 1375 IGRASPXXXXXXXXXXXFATYNLITLVIHNRSSGSEHDSSGRGSLFRDPITHMPEHV-KQ 1199
            + R SP           FATYNL+T+ IHNR++G+         L  DPI  MPE+V K 
Sbjct: 1    MARISPLFLVVLSLGFFFATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKP 60

Query: 1198 ENPRLPFHVALTATDAPYNKWQCRIMYYWYKRVKDMPGSEMGGFTRVLHSGSPDNLMDEI 1019
            +N +LPFH+ALTATDAPY+KWQCRIMYYWYK+ KD+PGSEMGGFTR+LHSGSPDNLM+EI
Sbjct: 61   KNAKLPFHIALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGSPDNLMEEI 120

Query: 1018 PTYVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVKPLPNLARGGY 839
            PT+VVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIF+KPLPNLA G Y
Sbjct: 121  PTFVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFIKPLPNLAHGDY 180

Query: 838  PAAFPFFYIKPAENEKLIRKYYPEEKGPVTNIDPIGNSPVIIKKSVLEKIAPTWMNVSIR 659
            PAA+PFFYIKP +NEK+IRK+YPEE GPVTN+DPIGNSPVIIK+ +LEKIAPTWMNVS+R
Sbjct: 181  PAAYPFFYIKPVQNEKIIRKFYPEEHGPVTNVDPIGNSPVIIKRELLEKIAPTWMNVSLR 240

Query: 658  MKNDPETDKTFGWVLEMYGYAVASALHDVQHILRKDFMIQPPWDREVGKNFIIHYTYGCD 479
            MK+DPETDK FGWVLEMY YAVASALH VQHIL+KDFM+QPPWD E  K FIIHYTYGCD
Sbjct: 241  MKDDPETDKVFGWVLEMYAYAVASALHGVQHILQKDFMLQPPWDLETAKKFIIHYTYGCD 300

Query: 478  YSLKGELTYGKFGDWRFDKRSFXXXXXXXXXXXXXXXXPESVVTLVKKINEATASIPGWE 299
            Y+LKGELTYGK G+WRFDKRS+                PESVVTLVK +NEATA++P W+
Sbjct: 301  YNLKGELTYGKIGEWRFDKRSYLRGPPPRNLSLPPPGVPESVVTLVKMVNEATANLPRWD 360

Query: 298  T 296
            T
Sbjct: 361  T 361


>ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250010 [Vitis vinifera]
          Length = 367

 Score =  556 bits (1432), Expect = e-156
 Identities = 269/368 (73%), Positives = 305/368 (82%), Gaps = 1/368 (0%)
 Frame = -3

Query: 1393 MIGRKNIGRASPXXXXXXXXXXXFATYNLITLVIHNRSSGSEHDSSGRGSLFRDPITHMP 1214
            MI RK++GRAS            FATYNL+T+++HNR SG  +  +    +F DPIT M 
Sbjct: 1    MIVRKSMGRASLLLLVLLALGFFFATYNLLTMIMHNRGSGLGNWMTDDFDVF-DPITRMT 59

Query: 1213 EHVKQE-NPRLPFHVALTATDAPYNKWQCRIMYYWYKRVKDMPGSEMGGFTRVLHSGSPD 1037
            +  K+  N  L FHVALTATDAPY++WQCRIMYYWYK+VKDMPGSEMGGFTRVLHSGSPD
Sbjct: 60   KETKKVGNRNLYFHVALTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGFTRVLHSGSPD 119

Query: 1036 NLMDEIPTYVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVKPLPN 857
            +LMDEIPT+VV PLP GLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFV PLPN
Sbjct: 120  SLMDEIPTFVVYPLPDGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVNPLPN 179

Query: 856  LARGGYPAAFPFFYIKPAENEKLIRKYYPEEKGPVTNIDPIGNSPVIIKKSVLEKIAPTW 677
            LA GG+PA FPFFYIKPA+NEK+IRK+YP+EKGPVT++DPIGNSPVII+KS LE+IAPTW
Sbjct: 180  LAHGGHPAGFPFFYIKPADNEKIIRKFYPKEKGPVTDVDPIGNSPVIIEKSQLEEIAPTW 239

Query: 676  MNVSIRMKNDPETDKTFGWVLEMYGYAVASALHDVQHILRKDFMIQPPWDREVGKNFIIH 497
            MN+S+RMK+DPETDK FGWVLEMY YAVASALH VQHILRKDFM+QPPWD EVGK FIIH
Sbjct: 240  MNISLRMKDDPETDKAFGWVLEMYAYAVASALHGVQHILRKDFMLQPPWDLEVGKKFIIH 299

Query: 496  YTYGCDYSLKGELTYGKFGDWRFDKRSFXXXXXXXXXXXXXXXXPESVVTLVKKINEATA 317
            YTYGCDY+LKGELTYGK G+WRFDKRSF                PESVV LV+ +NEATA
Sbjct: 300  YTYGCDYNLKGELTYGKIGEWRFDKRSFLSGPPPKNLTLPPPGVPESVVRLVQMVNEATA 359

Query: 316  SIPGWETD 293
            +IPGW+ +
Sbjct: 360  NIPGWDVE 367


>emb|CBI24243.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  551 bits (1419), Expect = e-154
 Identities = 268/368 (72%), Positives = 303/368 (82%), Gaps = 1/368 (0%)
 Frame = -3

Query: 1393 MIGRKNIGRASPXXXXXXXXXXXFATYNLITLVIHNRSSGSEHDSSGRGSLFRDPITHMP 1214
            MI RK++GRAS            FATYNL+T+++HNR  G++ D         DPIT M 
Sbjct: 1    MIVRKSMGRASLLLLVLLALGFFFATYNLLTMIMHNR--GNDFDVF-------DPITRMT 51

Query: 1213 EHVKQE-NPRLPFHVALTATDAPYNKWQCRIMYYWYKRVKDMPGSEMGGFTRVLHSGSPD 1037
            +  K+  N  L FHVALTATDAPY++WQCRIMYYWYK+VKDMPGSEMGGFTRVLHSGSPD
Sbjct: 52   KETKKVGNRNLYFHVALTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGFTRVLHSGSPD 111

Query: 1036 NLMDEIPTYVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVKPLPN 857
            +LMDEIPT+VV PLP GLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFV PLPN
Sbjct: 112  SLMDEIPTFVVYPLPDGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVNPLPN 171

Query: 856  LARGGYPAAFPFFYIKPAENEKLIRKYYPEEKGPVTNIDPIGNSPVIIKKSVLEKIAPTW 677
            LA GG+PA FPFFYIKPA+NEK+IRK+YP+EKGPVT++DPIGNSPVII+KS LE+IAPTW
Sbjct: 172  LAHGGHPAGFPFFYIKPADNEKIIRKFYPKEKGPVTDVDPIGNSPVIIEKSQLEEIAPTW 231

Query: 676  MNVSIRMKNDPETDKTFGWVLEMYGYAVASALHDVQHILRKDFMIQPPWDREVGKNFIIH 497
            MN+S+RMK+DPETDK FGWVLEMY YAVASALH VQHILRKDFM+QPPWD EVGK FIIH
Sbjct: 232  MNISLRMKDDPETDKAFGWVLEMYAYAVASALHGVQHILRKDFMLQPPWDLEVGKKFIIH 291

Query: 496  YTYGCDYSLKGELTYGKFGDWRFDKRSFXXXXXXXXXXXXXXXXPESVVTLVKKINEATA 317
            YTYGCDY+LKGELTYGK G+WRFDKRSF                PESVV LV+ +NEATA
Sbjct: 292  YTYGCDYNLKGELTYGKIGEWRFDKRSFLSGPPPKNLTLPPPGVPESVVRLVQMVNEATA 351

Query: 316  SIPGWETD 293
            +IPGW+ +
Sbjct: 352  NIPGWDVE 359


Top