BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008248
         (2272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   753   0.0  
ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2...   736   0.0  
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s...   732   0.0  
ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|2...   731   0.0  
ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex s...   726   0.0  

>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis vinifera]
          Length = 586

 Score =  753 bits (1943), Expect = 0.0
 Identities = 383/467 (82%), Positives = 404/467 (86%), Gaps = 2/467 (0%)
 Frame = +1

Query: 205  EALTPLD-STDSVQKD-DFLIKPQSFTPTLDTSQWPILLKNYDRLNVRTGHYTPLPSGYS 378
            EAL  ++  +D  QKD +FLIKPQSFTP+LDTSQWPILLKNYDRLNVRTGHYTPLPSGYS
Sbjct: 21   EALDVVEFGSDPTQKDGEFLIKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYS 80

Query: 379  PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 558
            PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID
Sbjct: 81   PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 140

Query: 559  RATRLVKSQQGAGKEYVCIARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR 738
            RATRLVKSQQGAGKEYVC+ARLHS+VPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR
Sbjct: 141  RATRLVKSQQGAGKEYVCVARLHSSVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR 200

Query: 739  TIYESKLLEYDADKHLIVFWISCEAGTYVRTLCXXXXXXXXXXXXMQELRRVRSGIMGEK 918
            TIYESKLLEYD D+HL+VFWISCEAGTYVRTLC            MQELRRVRSGI+GEK
Sbjct: 201  TIYESKLLEYDPDRHLVVFWISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEK 260

Query: 919  DNMVTMHDVMDAQWVYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMI 1098
            DNMVTMHDVMDAQWVYDNYRDE+YLRRVIMPLEV+LTSYKRLVVKDSAVNAICYGAKLMI
Sbjct: 261  DNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMI 320

Query: 1099 PGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYP 1278
            PGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYP
Sbjct: 321  PGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYP 380

Query: 1279 RKWGLGPRASMKKKMVAEGLLSKHGKPNEKTPAEWLRNVVLPTGGDAMVAGHAAATEPIP 1458
            RKWGLGPRA+MKKK++ EG L+KHGKPNE TP+EWLRNVVLPTGGD+MVA  AAA EP  
Sbjct: 381  RKWGLGPRAAMKKKLITEGKLNKHGKPNENTPSEWLRNVVLPTGGDSMVASLAAAVEP-- 438

Query: 1459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLEDSSVSPAPAPTKKVK 1599
                                        RKL +S+  P   P KK+K
Sbjct: 439  ----------TVKAETDVKEEIDGEQRKRKLNESTDDPVTVPAKKIK 475


>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
            predicted protein [Populus trichocarpa]
          Length = 593

 Score =  736 bits (1901), Expect = 0.0
 Identities = 376/472 (79%), Positives = 400/472 (84%), Gaps = 2/472 (0%)
 Frame = +1

Query: 199  TKEALTPLDSTDSVQKDDFLIKPQSFTPTLDTSQWPILLKNYDRLNVRTGHYTPLPSGYS 378
            T+E  T  + T    KD F+IKPQ+FTPT+DTSQWPILLKNYDRLNVRTGHYTPLPSG+S
Sbjct: 18   TQETQTDANPTTDTDKD-FMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPSGHS 76

Query: 379  PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 558
            PLKRPLAEYIRYGI+NLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID
Sbjct: 77   PLKRPLAEYIRYGIMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 136

Query: 559  RATRLVKSQQGAGKEYVCIARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR 738
            RATRLVKSQQGAGKEYVCIARLH  VPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR
Sbjct: 137  RATRLVKSQQGAGKEYVCIARLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR 196

Query: 739  TIYESKLLEYDADKHLIVFWISCEAGTYVRTLCXXXXXXXXXXXXMQELRRVRSGIMGEK 918
            TIYESKLLEYDAD+HL+VFWISCEAGTYVRT+C            MQELRRVRSGI+GEK
Sbjct: 197  TIYESKLLEYDADRHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGILGEK 256

Query: 919  DNMVTMHDVMDAQWVYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMI 1098
            DNMVTMHDVMDAQWVYDNYRDE+YLRR IMPLEVLLTSYKRLVVKDSAVNAICYGAKLMI
Sbjct: 257  DNMVTMHDVMDAQWVYDNYRDESYLRRAIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMI 316

Query: 1099 PGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYP 1278
            PGLLRFEN+IE GEEVVLMTTKGEA+ALGIAEMTTAVMATCDHGVVA+IKRVVMDRDTYP
Sbjct: 317  PGLLRFENDIEAGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYP 376

Query: 1279 RKWGLGPRASMKKKMVAEGLLSKHGKPNEKTPAEWLRNVVLPTGGDAMVAG-HAAATEPI 1455
            RKWGLGPRAS+KKK+++EG L KHGKPNE TP EW+RN+VLP GGD+MVAG  AAA EP+
Sbjct: 377  RKWGLGPRASIKKKLISEGKLDKHGKPNENTPHEWMRNLVLPPGGDSMVAGIAAAAAEPV 436

Query: 1456 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLEDSSVSP-APAPTKKVKVAE 1608
                                         RKL +SS SP A  P KK K  E
Sbjct: 437  ------VKEIGEEEKKKKNKDGEDGEGRKRKLNESSDSPAAQVPAKKTKTEE 482


>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
            max]
          Length = 589

 Score =  732 bits (1890), Expect = 0.0
 Identities = 364/462 (78%), Positives = 395/462 (85%)
 Frame = +1

Query: 232  DSVQKDDFLIKPQSFTPTLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIR 411
            +S  +   +IKPQSFTP +DTSQWPILLKNY+RLNVRTGHYTP+PSGYSPLKRPLAEY++
Sbjct: 26   ESKDEGGLMIKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLAEYLK 85

Query: 412  YGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQG 591
            YG+LNLDKPANPSSHEVVAWIKR+LRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQG
Sbjct: 86   YGVLNLDKPANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQG 145

Query: 592  AGKEYVCIARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD 771
            AGKEYVCIARLHS VPDV+KVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD
Sbjct: 146  AGKEYVCIARLHSDVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD 205

Query: 772  ADKHLIVFWISCEAGTYVRTLCXXXXXXXXXXXXMQELRRVRSGIMGEKDNMVTMHDVMD 951
             D+HL+VFWISCEAGTYVRT+C            MQELRRVRSGIMGEKDNMV+MHDVMD
Sbjct: 206  PDRHLVVFWISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMD 265

Query: 952  AQWVYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENEIE 1131
            AQWVYDNYRDETYLRRV+MPLE+LLTSYKRLVVKDSAVNAICYGAK MIPGLLRFEN+I+
Sbjct: 266  AQWVYDNYRDETYLRRVVMPLEILLTSYKRLVVKDSAVNAICYGAKFMIPGLLRFENDID 325

Query: 1132 NGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYPRKWGLGPRASM 1311
             GEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVA+IKRVVMDRDTYPRKWGLGPRASM
Sbjct: 326  VGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASM 385

Query: 1312 KKKMVAEGLLSKHGKPNEKTPAEWLRNVVLPTGGDAMVAGHAAATEPIPXXXXXXXXXXX 1491
            KK++++EG L KHGKPNEKTP EWLRN+VLPTGGD+++AG AAA EP             
Sbjct: 386  KKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGGDSVIAGLAAAPEP------------- 432

Query: 1492 XXXXXXXXXXXXXXXXXRKLEDSSVSPAPAPTKKVKVAEANQ 1617
                             RK  +S+ SP   P KKVKV E  +
Sbjct: 433  -EDDKIQKKEGDGEGKKRKKHESTDSPVAVPAKKVKVDEVEE 473


>ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|222867894|gb|EEF05025.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  731 bits (1888), Expect = 0.0
 Identities = 359/419 (85%), Positives = 386/419 (92%)
 Frame = +1

Query: 199  TKEALTPLDSTDSVQKDDFLIKPQSFTPTLDTSQWPILLKNYDRLNVRTGHYTPLPSGYS 378
            T+E  T  + TD+V+  DF+IKPQ+FTPT+DTSQWPILLKNYDRLNVRTGHYTPLP G+S
Sbjct: 7    TQETETETNPTDTVK--DFMIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPCGHS 64

Query: 379  PLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 558
            PLKRPLAEYIRYG++NLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID
Sbjct: 65   PLKRPLAEYIRYGVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCID 124

Query: 559  RATRLVKSQQGAGKEYVCIARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIR 738
            RATRLVKSQQGAGKEYVCIARLH  + DV KVARALETLTGAVFQRPPLISAVKRQLRIR
Sbjct: 125  RATRLVKSQQGAGKEYVCIARLHDKIADVTKVARALETLTGAVFQRPPLISAVKRQLRIR 184

Query: 739  TIYESKLLEYDADKHLIVFWISCEAGTYVRTLCXXXXXXXXXXXXMQELRRVRSGIMGEK 918
            TIYESKLLEYDADKHL+VFWISCEAGTYVRT+C            MQELRRVRSGI+GEK
Sbjct: 185  TIYESKLLEYDADKHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEK 244

Query: 919  DNMVTMHDVMDAQWVYDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMI 1098
            DNMVTMHDVMDAQWVYDNYRDE+YLRRVIMPLEV+LTSYKRLVVKDSAVNAICYGAKLMI
Sbjct: 245  DNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVILTSYKRLVVKDSAVNAICYGAKLMI 304

Query: 1099 PGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYP 1278
            PGLLRFEN+IE GEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVA+IKRVVMDRDTYP
Sbjct: 305  PGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYP 364

Query: 1279 RKWGLGPRASMKKKMVAEGLLSKHGKPNEKTPAEWLRNVVLPTGGDAMVAGHAAATEPI 1455
            RKWGLGP+AS+KKK+++EG L KHGKPN+ TP EW RN+VLP GGD+MVAG AAA EP+
Sbjct: 365  RKWGLGPKASIKKKLISEGKLDKHGKPNDNTPHEWARNLVLPAGGDSMVAGLAAAAEPV 423


>ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
            max]
          Length = 555

 Score =  726 bits (1874), Expect = 0.0
 Identities = 350/399 (87%), Positives = 378/399 (94%)
 Frame = +1

Query: 256  LIKPQSFTPTLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDK 435
            +IKPQSFTP +DTSQWPILLKNY+RLNVRTGHYTP+PSGYSPLKRPL+EY++YG+LNLDK
Sbjct: 1    MIKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLSEYLKYGVLNLDK 60

Query: 436  PANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 615
            PANPSSHEVVAWIKR+LRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI
Sbjct: 61   PANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 120

Query: 616  ARLHSAVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLIVF 795
            ARLHSAVPD++KV+RALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYD D+HL+VF
Sbjct: 121  ARLHSAVPDISKVSRALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVF 180

Query: 796  WISCEAGTYVRTLCXXXXXXXXXXXXMQELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNY 975
            WISCEAGTYVRT+C            MQELRRVRSGIMGEKDNMV+MHDVMDAQWVYDNY
Sbjct: 181  WISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNY 240

Query: 976  RDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENEIENGEEVVLM 1155
            RDETYLRRV+MPLE+LLTSYKRLVVKDSAVNAICYGAK MIPGLLRFEN+I+ GEEVVLM
Sbjct: 241  RDETYLRRVVMPLEILLTSYKRLVVKDSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLM 300

Query: 1156 TTKGEAIALGIAEMTTAVMATCDHGVVARIKRVVMDRDTYPRKWGLGPRASMKKKMVAEG 1335
            TTKGEAIALGIAEMTTAVMATCDHGVVA+IKRVVMDRDTYPRKWGLGPRASMKK++++EG
Sbjct: 301  TTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEG 360

Query: 1336 LLSKHGKPNEKTPAEWLRNVVLPTGGDAMVAGHAAATEP 1452
             L KHGKPNEKTP EWLRN+VLPTGGD+M+AG AAA EP
Sbjct: 361  KLDKHGKPNEKTPQEWLRNLVLPTGGDSMIAGLAAAPEP 399