BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008238
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...   253   6e-65
ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...   249   6e-64
ref|XP_002510210.1| DCL protein, chloroplast precursor, putative...   248   2e-63
ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like i...   246   9e-63
ref|NP_683398.1| uncharacterized protein [Arabidopsis thaliana] ...   242   1e-61

>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score =  253 bits (646), Expect = 6e-65
 Identities = 131/210 (62%), Positives = 151/210 (71%), Gaps = 3/210 (1%)
 Frame = -2

Query: 907 NSPPLL---LRTNPSSLHFSPSLIYFKTSRTLLQPRFRALKTGSDGDKVVKQDPYSPDLL 737
           +SPPL    L TNP SLH S  +++F T RT   P   ALKT SDG     Q+ Y PDLL
Sbjct: 7   SSPPLQIHHLHTNPISLHPSHPILHFATHRT---PSVPALKTASDGS----QEVYGPDLL 59

Query: 736 KRPLISPLDVGEGPTKNERFSDGNEGYESEDKREQDEWVDWEDQILEDTVPLVGFVRMLL 557
           ++P +S  D              +EG     KR+  EWVDWEDQILEDTVPLVGFVRM+L
Sbjct: 60  RKPHVSAPD--------------DEGDRKRTKRKGGEWVDWEDQILEDTVPLVGFVRMIL 105

Query: 556 HSGKYGSGDRLSPEHEKTILERVLPFHPEYEKKMGCGVDYIKVDYHTDFEDSRCLFIVRK 377
           HSGKY SG+RLSPEHEK ILER+LP+HP YE+K+G G+DYI V YH +FE SRCLFIVRK
Sbjct: 106 HSGKYRSGERLSPEHEKIILERLLPYHPGYERKIGSGIDYITVGYHPEFESSRCLFIVRK 165

Query: 376 DGEAVDFSYWKCIKGLIKRNYPLYADSFIL 287
           DGE VDFSYWKCIKG I++NYPLYADSFIL
Sbjct: 166 DGELVDFSYWKCIKGFIRKNYPLYADSFIL 195


>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  249 bits (637), Expect = 6e-64
 Identities = 128/217 (58%), Positives = 158/217 (72%), Gaps = 3/217 (1%)
 Frame = -2

Query: 928 LAMISLSNSPPL--LLRTNPSSLHFSPSLIYFKTSR-TLLQPRFRALKTGSDGDKVVKQD 758
           +AM S+   PP       NP+  + SP ++ F T       P  RALKTG +G ++    
Sbjct: 1   MAMASILKPPPFPPFHSLNPNFFNSSPLILCFPTHPINSFHPSTRALKTGPEGIRLRSHQ 60

Query: 757 PYSPDLLKRPLISPLDVGEGPTKNERFSDGNEGYESEDKREQDEWVDWEDQILEDTVPLV 578
            YS DLL++P+        GP++++   D +E   +ED+ E+ EWVDWED+ILEDTVPLV
Sbjct: 61  EYSSDLLRKPVGPSAKDLAGPSEDD---DSSEESGNEDE-EEVEWVDWEDKILEDTVPLV 116

Query: 577 GFVRMLLHSGKYGSGDRLSPEHEKTILERVLPFHPEYEKKMGCGVDYIKVDYHTDFEDSR 398
           GFVRM+LH+GKY +GDRL PEHEKTILER+LP+HPE EKK+GCGVDYI V YH DFE SR
Sbjct: 117 GFVRMVLHTGKYENGDRLRPEHEKTILERLLPYHPESEKKIGCGVDYITVGYHPDFESSR 176

Query: 397 CLFIVRKDGEAVDFSYWKCIKGLIKRNYPLYADSFIL 287
           CLFIVRKDGE VDFSYWKCIKGLI++NYPLYA+SFIL
Sbjct: 177 CLFIVRKDGEMVDFSYWKCIKGLIRKNYPLYAESFIL 213


>ref|XP_002510210.1| DCL protein, chloroplast precursor, putative [Ricinus communis]
           gi|223550911|gb|EEF52397.1| DCL protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 214

 Score =  248 bits (633), Expect = 2e-63
 Identities = 132/218 (60%), Positives = 159/218 (72%), Gaps = 4/218 (1%)
 Frame = -2

Query: 928 LAMISLSNSPPLLLR--TNPSSLHFSPSLIYFKTSRTL--LQPRFRALKTGSDGDKVVKQ 761
           + M SLS  PP L    +NP SL+FSP ++ F   RT      R  ALKTGSDG      
Sbjct: 1   MTMASLSKPPPCLHGHYSNPISLYFSPVILSFPFHRTTTSFNSRIFALKTGSDGS----- 55

Query: 760 DPYSPDLLKRPLISPLDVGEGPTKNERFSDGNEGYESEDKREQDEWVDWEDQILEDTVPL 581
                DLL++P++       G + +E   D N   +++DK E DE VDWEDQILEDTVPL
Sbjct: 56  -----DLLRKPIVPSEKELSGISDDEE--DSNRKRDNKDK-EDDELVDWEDQILEDTVPL 107

Query: 580 VGFVRMLLHSGKYGSGDRLSPEHEKTILERVLPFHPEYEKKMGCGVDYIKVDYHTDFEDS 401
           VGFVRM+LHSGKY +GDRLSPEHE+TI+ER+LPFHPE EKK+G G+DYI V +HT+FE+S
Sbjct: 108 VGFVRMILHSGKYENGDRLSPEHERTIVERLLPFHPECEKKIGPGIDYITVGHHTEFENS 167

Query: 400 RCLFIVRKDGEAVDFSYWKCIKGLIKRNYPLYADSFIL 287
           RCLFIVRKDG+ VDFSYWKCIKGLI++NYPLYADSFIL
Sbjct: 168 RCLFIVRKDGKLVDFSYWKCIKGLIRKNYPLYADSFIL 205


>ref|XP_002284778.1| PREDICTED: protein DCL, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 215

 Score =  246 bits (627), Expect = 9e-63
 Identities = 124/205 (60%), Positives = 148/205 (72%), Gaps = 1/205 (0%)
 Frame = -2

Query: 898 PLLLRTNPSSLHFSPSLIYFKTSRTL-LQPRFRALKTGSDGDKVVKQDPYSPDLLKRPLI 722
           P+ L  NP SLH SPSL  F + +T  L+P   A K  S G K+  QD  + D L++P I
Sbjct: 12  PVRLHRNPISLHLSPSLRSFPSRQTTSLRPVLCARKPRSPGGKLGSQDARASDFLRKPTI 71

Query: 721 SPLDVGEGPTKNERFSDGNEGYESEDKREQDEWVDWEDQILEDTVPLVGFVRMLLHSGKY 542
           SP D G G +  E+   G         RE++EWVDWEDQILEDTVPLVG+VRM++HSGKY
Sbjct: 72  SPGDDGGGSSVREKSYKG---------REEEEWVDWEDQILEDTVPLVGYVRMIIHSGKY 122

Query: 541 GSGDRLSPEHEKTILERVLPFHPEYEKKMGCGVDYIKVDYHTDFEDSRCLFIVRKDGEAV 362
            +GDRLS EHEK +LE++L +HPE EKK+GCG+DYI V YH DFE SRCLFIVR DGE V
Sbjct: 123 ENGDRLSLEHEKFVLEKLLAYHPECEKKIGCGIDYITVGYHPDFEGSRCLFIVRNDGELV 182

Query: 361 DFSYWKCIKGLIKRNYPLYADSFIL 287
           DFSYWKCIKGLI++ YP YADSFIL
Sbjct: 183 DFSYWKCIKGLIRKKYPQYADSFIL 207


>ref|NP_683398.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12321014|gb|AAG50632.1|AC083835_17 defective
           chloroplasts and leaves (DCL) protein, putative
           [Arabidopsis thaliana] gi|22135799|gb|AAM91086.1|
           At1g45261/F2G19.1 [Arabidopsis thaliana]
           gi|48310651|gb|AAT41860.1| At1g45261 [Arabidopsis
           thaliana] gi|62318604|dbj|BAD95026.1| defective
           chloroplasts and leaves (DCL) protein [Arabidopsis
           thaliana] gi|332193992|gb|AEE32113.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 219

 Score =  242 bits (618), Expect = 1e-61
 Identities = 123/207 (59%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
 Frame = -2

Query: 904 SPPLLLRTNPSSLHFSPSLIYF-KTSRTLLQPRFRALKTGSDGDKVVKQDPYSPDLLKRP 728
           SP    RT   S   SP  +YF +   T L+PR RAL+T SDG K+   + Y  +LL+RP
Sbjct: 14  SPYFRCRTYIFSFSSSPLCLYFPRGDSTSLRPRVRALRTESDGAKIGNSESYGSELLRRP 73

Query: 727 LISPLDVGEGPTKNERFSDGNEGYESEDKREQDEWVDWEDQILEDTVPLVGFVRMLLHSG 548
            I+  +  E            E  E E+  E DE+VDWED+ILE TVPLVGFVRM+LHSG
Sbjct: 74  RIASEESSE-----------EEEEEEEENSEGDEFVDWEDKILEVTVPLVGFVRMILHSG 122

Query: 547 KYGSGDRLSPEHEKTILERVLPFHPEYEKKMGCGVDYIKVDYHTDFEDSRCLFIVRKDGE 368
           KY + DRLSPEHE+TI+E +LP+HPE EKK+GCG+DYI V +H DFE SRC+FIVRKDGE
Sbjct: 123 KYANRDRLSPEHERTIIEMLLPYHPECEKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGE 182

Query: 367 AVDFSYWKCIKGLIKRNYPLYADSFIL 287
            VDFSYWKCIKGLIK+ YPLYADSFIL
Sbjct: 183 VVDFSYWKCIKGLIKKKYPLYADSFIL 209