BLASTX nr result

ID: Cimicifuga21_contig00008232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008232
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]   167   6e-40
ref|XP_003553769.1| PREDICTED: translational activator GCN1-like...   167   7e-40
ref|XP_003521781.1| PREDICTED: translational activator GCN1 [Gly...   166   1e-39
ref|XP_004155110.1| PREDICTED: LOW QUALITY PROTEIN: translationa...   165   2e-39
ref|XP_004152809.1| PREDICTED: translational activator GCN1-like...   165   2e-39

>emb|CAN77483.1| hypothetical protein VITISV_040059 [Vitis vinifera]
          Length = 720

 Score =  167 bits (423), Expect(2) = 6e-40
 Identities = 86/113 (76%), Positives = 95/113 (84%)
 Frame = -2

Query: 360 SYRIGYLFKNNKLYLVDETPNMISTLIILLSDSDPATVGVKYDH**FTVRALSRVIGSVP 181
           SY IGY FKN+KLYLVDE PNMI+TLI+LLSDSD ATV V ++       ALSRV  SVP
Sbjct: 224 SYLIGYFFKNSKLYLVDEAPNMITTLIVLLSDSDSATVAVAWE-------ALSRVTNSVP 276

Query: 180 KEVLPSYIKLVRDAVSTFKDKERRKRKGGPVLVPRLCLPKALQPLLPVFLQGL 22
           KEVLPSYIK+VRDAVST +DKERRK+KGGPVL+P  CLPKALQPLLPVFLQGL
Sbjct: 277 KEVLPSYIKIVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPLLPVFLQGL 329



 Score = 21.9 bits (45), Expect(2) = 6e-40
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 386 ALIRRGSSYLIG 351
           A IRR SSYLIG
Sbjct: 217 ASIRRSSSYLIG 228


>ref|XP_003553769.1| PREDICTED: translational activator GCN1-like [Glycine max]
          Length = 2870

 Score =  167 bits (422), Expect(2) = 7e-40
 Identities = 87/113 (76%), Positives = 96/113 (84%)
 Frame = -2

Query: 360  SYRIGYLFKNNKLYLVDETPNMISTLIILLSDSDPATVGVKYDH**FTVRALSRVIGSVP 181
            SY IGY FKN+KLYLVDE PNMISTLIILLSDSD +TV V ++       ALSRVI SVP
Sbjct: 2374 SYLIGYFFKNSKLYLVDEAPNMISTLIILLSDSDSSTVTVAWE-------ALSRVIISVP 2426

Query: 180  KEVLPSYIKLVRDAVSTFKDKERRKRKGGPVLVPRLCLPKALQPLLPVFLQGL 22
            KEVLPSYIKLVRDAVST +DKERRK+KGGPVL+P  CLPKALQP+LP+FLQGL
Sbjct: 2427 KEVLPSYIKLVRDAVSTSRDKERRKKKGGPVLIPGFCLPKALQPILPIFLQGL 2479



 Score = 21.9 bits (45), Expect(2) = 7e-40
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 386  ALIRRGSSYLIG 351
            A +RR SSYLIG
Sbjct: 2367 AAVRRSSSYLIG 2378


>ref|XP_003521781.1| PREDICTED: translational activator GCN1 [Glycine max]
          Length = 2616

 Score =  166 bits (421), Expect(2) = 1e-39
 Identities = 86/113 (76%), Positives = 96/113 (84%)
 Frame = -2

Query: 360  SYRIGYLFKNNKLYLVDETPNMISTLIILLSDSDPATVGVKYDH**FTVRALSRVIGSVP 181
            SY IGY FKN+KLYLVDE PNMISTLIILLSDSD +TV V ++       ALSRVI SVP
Sbjct: 2120 SYLIGYFFKNSKLYLVDEAPNMISTLIILLSDSDSSTVTVAWE-------ALSRVIISVP 2172

Query: 180  KEVLPSYIKLVRDAVSTFKDKERRKRKGGPVLVPRLCLPKALQPLLPVFLQGL 22
            KEVLPSYIKLVRDAVST +DKERRK+KGGP+L+P  CLPKALQP+LP+FLQGL
Sbjct: 2173 KEVLPSYIKLVRDAVSTSRDKERRKKKGGPILIPGFCLPKALQPILPIFLQGL 2225



 Score = 21.9 bits (45), Expect(2) = 1e-39
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 386  ALIRRGSSYLIG 351
            A +RR SSYLIG
Sbjct: 2113 AAVRRSSSYLIG 2124


>ref|XP_004155110.1| PREDICTED: LOW QUALITY PROTEIN: translational activator GCN1-like
            [Cucumis sativus]
          Length = 2611

 Score =  165 bits (418), Expect(2) = 2e-39
 Identities = 84/113 (74%), Positives = 95/113 (84%)
 Frame = -2

Query: 360  SYRIGYLFKNNKLYLVDETPNMISTLIILLSDSDPATVGVKYDH**FTVRALSRVIGSVP 181
            SY IGY FKN+KLYLVDE PN+ISTLI+LLSDSD ATV V ++       ALSRV+ S+P
Sbjct: 2119 SYLIGYFFKNSKLYLVDEAPNLISTLIVLLSDSDSATVVVAWE-------ALSRVVSSIP 2171

Query: 180  KEVLPSYIKLVRDAVSTFKDKERRKRKGGPVLVPRLCLPKALQPLLPVFLQGL 22
            KE LPSYIKLVRDAVST +DKERRKRKGG +L+P LCLPKALQPLLP+FLQGL
Sbjct: 2172 KETLPSYIKLVRDAVSTSRDKERRKRKGGAILIPGLCLPKALQPLLPIFLQGL 2224



 Score = 22.3 bits (46), Expect(2) = 2e-39
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 386  ALIRRGSSYLIG 351
            A IRR SSYLIG
Sbjct: 2112 ATIRRSSSYLIG 2123


>ref|XP_004152809.1| PREDICTED: translational activator GCN1-like [Cucumis sativus]
          Length = 2611

 Score =  165 bits (418), Expect(2) = 2e-39
 Identities = 84/113 (74%), Positives = 95/113 (84%)
 Frame = -2

Query: 360  SYRIGYLFKNNKLYLVDETPNMISTLIILLSDSDPATVGVKYDH**FTVRALSRVIGSVP 181
            SY IGY FKN+KLYLVDE PN+ISTLI+LLSDSD ATV V ++       ALSRV+ S+P
Sbjct: 2119 SYLIGYFFKNSKLYLVDEAPNLISTLIVLLSDSDSATVVVAWE-------ALSRVVSSIP 2171

Query: 180  KEVLPSYIKLVRDAVSTFKDKERRKRKGGPVLVPRLCLPKALQPLLPVFLQGL 22
            KE LPSYIKLVRDAVST +DKERRKRKGG +L+P LCLPKALQPLLP+FLQGL
Sbjct: 2172 KETLPSYIKLVRDAVSTSRDKERRKRKGGAILIPGLCLPKALQPLLPIFLQGL 2224



 Score = 22.3 bits (46), Expect(2) = 2e-39
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -3

Query: 386  ALIRRGSSYLIG 351
            A IRR SSYLIG
Sbjct: 2112 AAIRRSSSYLIG 2123


Top