BLASTX nr result

ID: Cimicifuga21_contig00008219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008219
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611...   364   3e-98
ref|XP_002519350.1| conserved hypothetical protein [Ricinus comm...   350   4e-94
ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycin...   345   2e-92
ref|XP_003551010.1| PREDICTED: uncharacterized protein At3g17611...   342   2e-91
ref|XP_002314342.1| predicted protein [Populus trichocarpa] gi|2...   340   5e-91

>ref|XP_002270713.1| PREDICTED: uncharacterized protein At3g17611 [Vitis vinifera]
            gi|147864086|emb|CAN81122.1| hypothetical protein
            VITISV_038478 [Vitis vinifera]
            gi|297736839|emb|CBI26040.3| unnamed protein product
            [Vitis vinifera]
          Length = 328

 Score =  364 bits (935), Expect = 3e-98
 Identities = 187/294 (63%), Positives = 216/294 (73%), Gaps = 1/294 (0%)
 Frame = +2

Query: 410  RRVSRGMLPFLAIHAVNEYYRSERKPPVTAGLLVANTLIYLRPGVLDGILPTLNEVWFNP 589
            RRVSRGMLP LA+H  NEYYR   KPPVTAGLL ANTLIYLRP  +D +LPT+++VWFNP
Sbjct: 6    RRVSRGMLPLLALHTANEYYRVGWKPPVTAGLLAANTLIYLRPSFIDSMLPTIDKVWFNP 65

Query: 590  HLIIKNGDLKRFFLSPLYHMGESHLVYNMMSLVWKGIQLETTMGSVEYASMVAXXXXXXX 769
            HLI+K+ DLKRF LSP YHM E+HLVYNMMSL+WKGIQLET+MGS E+ASMVA       
Sbjct: 66   HLILKHKDLKRFLLSPFYHMDEAHLVYNMMSLLWKGIQLETSMGSAEFASMVATLLGMSQ 125

Query: 770  XXXXXXAKSLLL-FGYDRAYYYEHAVGFSGVLFAMKVVLNSQAEDYTSVHGLIVPARYAA 946
                  AKSLLL F Y+RAYY + AVGFSGVLFAMKVVLNSQ+ DYT VHGLIVP R+AA
Sbjct: 126  GITLLLAKSLLLFFDYERAYYSQFAVGFSGVLFAMKVVLNSQSADYTYVHGLIVPTRHAA 185

Query: 947  WAELVLIQLFTPGVSFLGHLGGILAGMLYLRLKGSSYSGSNPLTTLLRGVAGILSWPIKF 1126
            W EL+LIQ+F PGVSFLGHLGGILAG+LYLRLKG +YSGS+PLT L +G+A  LSWP++F
Sbjct: 186  WVELILIQMFVPGVSFLGHLGGILAGILYLRLKG-TYSGSDPLTILFKGLADALSWPLRF 244

Query: 1127 TRDLFXXXXXXXXXXXXXXXXXXXXXXXXXXCSVCTFENSEWLNTCEMCSTERN 1288
             + LF                          C  CT++N   L+ CEMC T RN
Sbjct: 245  AQGLF--RRRRISGRGTVGGRQTRRTSGVWRCWSCTYDNPGGLSICEMCGTARN 296


>ref|XP_002519350.1| conserved hypothetical protein [Ricinus communis]
            gi|223541665|gb|EEF43214.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 325

 Score =  350 bits (899), Expect = 4e-94
 Identities = 179/289 (61%), Positives = 214/289 (74%), Gaps = 2/289 (0%)
 Frame = +2

Query: 413  RVSRGMLPFLAIHAVNEYYRSERKPPVTAGLLVANTLIYLRPGVLDGILPTLNEVWFNPH 592
            R+ RGMLP LAIHAV+EYYR   KPPVTAGLL ANTLIYLRP  L  ILP++++VWFNP+
Sbjct: 7    RLPRGMLPLLAIHAVSEYYRLPWKPPVTAGLLAANTLIYLRPAFLRPILPSIHDVWFNPY 66

Query: 593  LIIKNGDLKRFFLSPLYHMGESHLVYNMMSLVWKGIQLETTMGSVEYASMVAXXXXXXXX 772
            LI+K+GDLKRFFLS  YH+GESHLVYNMMSL+WKGIQLET+MGSVE+ASMVA        
Sbjct: 67   LILKDGDLKRFFLSAFYHVGESHLVYNMMSLLWKGIQLETSMGSVEFASMVAALLTMSQG 126

Query: 773  XXXXXAKSLLL-FGYDRAYYYEHAVGFSGVLFAMKVVLNSQAEDYTSVHGLIVPARYAAW 949
                 AKSLLL F Y R +Y E+AVGFSGVLFAMKVVLNSQ+++YT VHGL+VPAR+AAW
Sbjct: 127  ITLLLAKSLLLFFDYGRPFYSEYAVGFSGVLFAMKVVLNSQSDNYTHVHGLVVPARHAAW 186

Query: 950  AELVLIQLFTPGVSFLGHLGGILAGMLYLRLKGSSYSGSNPLTTLLRGVAGILSWPIKFT 1129
            AEL+LIQ+F PGVSFLGHLGGILAG+LYL+LKG  YSGS+PLT +++ +  ILSWP++  
Sbjct: 187  AELILIQMFVPGVSFLGHLGGILAGILYLKLKG-IYSGSDPLTLIIKNLTSILSWPLRLV 245

Query: 1130 RDLF-XXXXXXXXXXXXXXXXXXXXXXXXXXCSVCTFENSEWLNTCEMC 1273
            + LF                           C  CT++N    + CEMC
Sbjct: 246  KGLFGPRQQQISGRGTVGGSQAGRAVLRVWRCQACTYDNYSSSSVCEMC 294


>ref|NP_001240224.1| uncharacterized protein LOC100816495 [Glycine max]
            gi|255640981|gb|ACU20770.1| unknown [Glycine max]
          Length = 322

 Score =  345 bits (885), Expect = 2e-92
 Identities = 174/294 (59%), Positives = 212/294 (72%), Gaps = 2/294 (0%)
 Frame = +2

Query: 410  RRVSRGMLPFLAIHAVNEYYRSERKPPVTAGLLVANTLIYLRPGVLDGILPTLNEVWFNP 589
            +RVSRGMLP LA+H V+EYYRS+ KPP TA L+ ANTLIYLRP  LD ++P + +VWFNP
Sbjct: 7    QRVSRGMLPLLALHTVSEYYRSDHKPPFTAALIAANTLIYLRPSFLDPLIPPIEQVWFNP 66

Query: 590  HLIIKNGDLKRFFLSPLYHMGESHLVYNMMSLVWKGIQLETTMGSVEYASMVAXXXXXXX 769
            HLI+KN DLKRF LSP YH+GE HLVYNM+SL+WKG QLET+MGSV++AS+VA       
Sbjct: 67   HLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVDFASIVASLLVLSQ 126

Query: 770  XXXXXXAKSLLL-FGYDRAYYYEHAVGFSGVLFAMKVVLNSQAEDYTSVHGLIVPARYAA 946
                  +KSLLL F Y+R+YY E++VGFSGVLFAMKVVLNSQ+E+YTSV+G+IVP+RYAA
Sbjct: 127  GVTLMLSKSLLLFFDYERSYYSEYSVGFSGVLFAMKVVLNSQSENYTSVYGIIVPSRYAA 186

Query: 947  WAELVLIQLFTPGVSFLGHLGGILAGMLYLRLKGSSYSGSNPLTTLLRGVAGILSWPIKF 1126
            WAELVL QL  PGVSFLGHLGGILAG+LYL+L+ S+YSGSNP+  L+RG+   + WP KF
Sbjct: 187  WAELVLAQLLVPGVSFLGHLGGILAGLLYLKLR-STYSGSNPIKVLIRGIVDAVKWPFKF 245

Query: 1127 TRDLFXXXXXXXXXXXXXXXXXXXXXXXXXXCSVCTFENSEW-LNTCEMCSTER 1285
             R                             C  CT++N+   L  CEMC T R
Sbjct: 246  LR----------RRRGRITGRGTVGSNRAWRCQTCTYDNNNGSLRVCEMCGTIR 289


>ref|XP_003551010.1| PREDICTED: uncharacterized protein At3g17611-like [Glycine max]
          Length = 332

 Score =  342 bits (877), Expect = 2e-91
 Identities = 172/294 (58%), Positives = 210/294 (71%), Gaps = 2/294 (0%)
 Frame = +2

Query: 410  RRVSRGMLPFLAIHAVNEYYRSERKPPVTAGLLVANTLIYLRPGVLDGILPTLNEVWFNP 589
            +RVSRGMLP LA+H  +EYYRS+ KPPVTA L+ ANTLIYLRP  LD ++P + +VWFNP
Sbjct: 18   QRVSRGMLPILALHTFSEYYRSDHKPPVTAALIAANTLIYLRPSFLDPLIPPIEQVWFNP 77

Query: 590  HLIIKNGDLKRFFLSPLYHMGESHLVYNMMSLVWKGIQLETTMGSVEYASMVAXXXXXXX 769
            HLI+KN DLKRF LSP YH+GE HLVYNM+SL+WKG QLET+MGSV ++SMVA       
Sbjct: 78   HLILKNKDLKRFLLSPFYHIGEPHLVYNMLSLLWKGFQLETSMGSVNFSSMVASLLVLSQ 137

Query: 770  XXXXXXAKSLLL-FGYDRAYYYEHAVGFSGVLFAMKVVLNSQAEDYTSVHGLIVPARYAA 946
                  +KSLLL F Y+R+YY E++VGFSGVLFAMKVVLNSQ+E+YTSV+G+IVP+RYAA
Sbjct: 138  GVTLMLSKSLLLFFDYERSYYSEYSVGFSGVLFAMKVVLNSQSENYTSVYGVIVPSRYAA 197

Query: 947  WAELVLIQLFTPGVSFLGHLGGILAGMLYLRLKGSSYSGSNPLTTLLRGVAGILSWPIKF 1126
            WAELVL QL  PGVSFLGHLGGILAG+LYL+L+ S+YSGSNP+  ++RG+   + WP KF
Sbjct: 198  WAELVLAQLLVPGVSFLGHLGGILAGLLYLKLR-STYSGSNPIKVVIRGIVDAVKWPFKF 256

Query: 1127 TRDLFXXXXXXXXXXXXXXXXXXXXXXXXXXCSVCTFENSEW-LNTCEMCSTER 1285
                                           C  CT++N+   L  CEMC T R
Sbjct: 257  -----------LPRRGRITGRGTVGSNRAWRCQTCTYDNNNGSLRVCEMCGTNR 299


>ref|XP_002314342.1| predicted protein [Populus trichocarpa] gi|222863382|gb|EEF00513.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  340 bits (873), Expect = 5e-91
 Identities = 173/298 (58%), Positives = 217/298 (72%), Gaps = 4/298 (1%)
 Frame = +2

Query: 404  MDRR--VSRGMLPFLAIHAVNEYYRSERKPPVTAGLLVANTLIYLRPGVLDGILPTLNEV 577
            MDRR  +++GMLP LAIHAV+EYYR   KPPVTA LL ANTLIYLRP  L  ILP++++V
Sbjct: 1    MDRRGSLTKGMLPLLAIHAVSEYYRLPWKPPVTAALLGANTLIYLRPAFLRHILPSIDQV 60

Query: 578  WFNPHLIIKNGDLKRFFLSPLYHMGESHLVYNMMSLVWKGIQLETTMGSVEYASMVAXXX 757
            WFNPHLI+K  DLKRF LSP YH+ +SHLVYNMMSL+WKGIQLET++GSVE+ASM+A   
Sbjct: 61   WFNPHLILKYRDLKRFLLSPFYHVSDSHLVYNMMSLLWKGIQLETSVGSVEFASMLAALL 120

Query: 758  XXXXXXXXXXAKSLLL-FGYDRAYYYEHAVGFSGVLFAMKVVLNSQAEDYTSVHGLIVPA 934
                      A+SLLL F YD+ +Y E++ GFSGVLFAMKVVLNSQ+E  T+V+GL++PA
Sbjct: 121  AMSQGITLLLARSLLLFFDYDKPFYSEYSAGFSGVLFAMKVVLNSQSESLTNVYGLVIPA 180

Query: 935  RYAAWAELVLIQLFTPGVSFLGHLGGILAGMLYLRLKGSSYSGSNPLTTLLRGVAGILSW 1114
            R+AAWAEL+LIQ+F PGVSFLGHLGGILAG+LY++LK  +YSG +PLT  +R +  ++SW
Sbjct: 181  RHAAWAELILIQMFVPGVSFLGHLGGILAGILYVKLK-RAYSGPDPLTLTIRTLTNVISW 239

Query: 1115 PIKFTRDLF-XXXXXXXXXXXXXXXXXXXXXXXXXXCSVCTFENSEWLNTCEMCSTER 1285
            P++F R+LF                           C  CT++NS  L+ CEMC T R
Sbjct: 240  PLRFVRNLFQFRRGRISGRGSVGGRQTGRAMSGLWRCQACTYDNSSLLSVCEMCGTSR 297


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