BLASTX nr result
ID: Cimicifuga21_contig00008218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00008218 (1972 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 837 0.0 emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera] 833 0.0 ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus ... 800 0.0 ref|XP_004134505.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 791 0.0 ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1,... 790 0.0 >ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis vinifera] gi|296083248|emb|CBI22884.3| unnamed protein product [Vitis vinifera] Length = 651 Score = 837 bits (2162), Expect = 0.0 Identities = 431/619 (69%), Positives = 489/619 (78%), Gaps = 15/619 (2%) Frame = -2 Query: 1965 MQLCSPSPKSQIPLFSPPPNPTSSKFHFNILIKTLHSSPLP-KISPFSSRESA-PTVEEK 1792 ++L SPS S L+SP NP+SSKF F + I LHSS P + P +S++S+ P +E+K Sbjct: 5 LKLSSPSSPSNFSLYSPSQNPSSSKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLEQK 64 Query: 1791 LIRLDEENEQGIGSGKEG---FLMVRRPVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXS- 1624 + G GS + L VRRP+ Sbjct: 65 ------PHSSGFGSEPQSPPEVLTVRRPMKEYSGDDDESSNGDDVDEDTFSSSPIDAGLA 118 Query: 1623 EFAKKMPIFEPERLELVTSKEKPLGVNLELALYRAKVLGRNYRFDEAKQVLEKCLSLWPE 1444 EFAKK+P+FEP+R EL +S+E+PL VNL+LALYRAKVL RNY+F+EA+++L+KC+ WPE Sbjct: 119 EFAKKLPMFEPQRAEL-SSEERPLLVNLDLALYRAKVLARNYQFEEAEKILQKCIYYWPE 177 Query: 1443 DGRAYVALGKILSKQSKTMEARAVYERGCQATQGENPYIWQCWAVLENKMGNIRRARELF 1264 DGR YVALGKILSKQSKT EARAVYE+GCQATQGENPYIWQCWAVLENKMGNIRRAR+LF Sbjct: 178 DGRPYVALGKILSKQSKTSEARAVYEKGCQATQGENPYIWQCWAVLENKMGNIRRARDLF 237 Query: 1263 DAATVADKRHIAAWHGWAVLELKQGNVKKARNLLGKGLRYCGGNEYVYQTLALLEAKANR 1084 DAATVADKRH+AAWHGWAVLELKQGN+KKAR+LL KGL+Y GGNEY+YQTLALLEAKANR Sbjct: 238 DAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLALLEAKANR 297 Query: 1083 IEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNFSARQLFEKAIQASPKNRFAWHVWG 904 EQARYLFKQATKCNPKSCASWLAWAQLEMQQENN +ARQLFEKA+QASPKNRFAWHVWG Sbjct: 298 HEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFAWHVWG 357 Query: 903 VFEASLGNVDKGRKLLKIGHALNPRDPVLLQSLALLEYKESTANLARVLFRRASELDPRH 724 VFEA+LGN D GRKLLKIGHA+NPRDPVLLQSLALLEYK STANL+RVLFRRASELDPRH Sbjct: 358 VFEANLGNADVGRKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRRASELDPRH 417 Query: 723 QPVWIAWGWMEWKEGNIATARQLYQRALSIDATSESAARCLQAWGVLEQRIGNLSAARRL 544 QPVWIAWGWMEWKEGNIATAR++YQRALSID+T+ESAARCLQAWGVLE+R GNLSAARRL Sbjct: 418 QPVWIAWGWMEWKEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAGNLSAARRL 477 Query: 543 FRSSLNINSQSYITWMTWAAMEEEQGNSVRAEEIRDLYFQQRTEVVDDASWVMGFLDVID 364 FRSSLNINSQSYITWMTWA+ EE QGN+VRAEEIRDLYFQQRTEVVDDASWVMGFLD+ID Sbjct: 478 FRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDDASWVMGFLDIID 537 Query: 363 PALDRIKRLLNFEQKSY---------LKGQQDDDLRGMRXXXXXXXXXXXXEKTSDFDLD 211 PALD IKRLLN +Q SY + G +D + F+LD Sbjct: 538 PALDSIKRLLNLDQNSYYRIPDSSRNIPGANEDSSGPGPGPSSGNPDSKDTASENGFNLD 597 Query: 210 GFIKKKLFLDASKLEV*ME 154 FI++KL LD S L+V M+ Sbjct: 598 AFIREKLSLDPSNLDVQMQ 616 >emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera] Length = 629 Score = 833 bits (2151), Expect = 0.0 Identities = 428/616 (69%), Positives = 486/616 (78%), Gaps = 15/616 (2%) Frame = -2 Query: 1965 MQLCSPSPKSQIPLFSPPPNPTSSKFHFNILIKTLHSSPLP-KISPFSSRESA-PTVEEK 1792 ++L SPS S L+SP NP+SSKF F + I LHSS P + P +S++S+ P +E+K Sbjct: 5 LKLSSPSSPSNFSLYSPSQNPSSSKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLEQK 64 Query: 1791 LIRLDEENEQGIGSGKEG---FLMVRRPVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXS- 1624 + G GS + L VRRP+ Sbjct: 65 ------PHSSGFGSEPQSPPEVLTVRRPMKEYSGDDDESSNGDDVDEDTFSSSPIDAGLA 118 Query: 1623 EFAKKMPIFEPERLELVTSKEKPLGVNLELALYRAKVLGRNYRFDEAKQVLEKCLSLWPE 1444 EFAKK+P+FEP+R EL +S+E+PL VNL+LALYRAKVL RNY+F+EA+++L+KC+ WPE Sbjct: 119 EFAKKLPMFEPQRAEL-SSEERPLLVNLDLALYRAKVLARNYQFEEAEKILQKCIYYWPE 177 Query: 1443 DGRAYVALGKILSKQSKTMEARAVYERGCQATQGENPYIWQCWAVLENKMGNIRRARELF 1264 DGR YVALGKILSKQSKT EARAVYE+GCQATQGENPYIWQCWAVLENKMGNIRRAR+LF Sbjct: 178 DGRPYVALGKILSKQSKTSEARAVYEKGCQATQGENPYIWQCWAVLENKMGNIRRARDLF 237 Query: 1263 DAATVADKRHIAAWHGWAVLELKQGNVKKARNLLGKGLRYCGGNEYVYQTLALLEAKANR 1084 DAATVADKRH+AAWHGWAVLELKQGN+KKAR+LL KGL+Y GGNEY+YQTL LLEAKANR Sbjct: 238 DAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLXLLEAKANR 297 Query: 1083 IEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNFSARQLFEKAIQASPKNRFAWHVWG 904 EQARYLFKQATKCNPKSCASWLAWAQLEMQQENN +ARQLFEKA+QASPKNRFAWHVWG Sbjct: 298 HEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQASPKNRFAWHVWG 357 Query: 903 VFEASLGNVDKGRKLLKIGHALNPRDPVLLQSLALLEYKESTANLARVLFRRASELDPRH 724 VFEA+LGN D GRKLLKIGHA+NPRDPVLLQSLALLEYK STANL+RVLFRRASELDPRH Sbjct: 358 VFEANLGNADVGRKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLSRVLFRRASELDPRH 417 Query: 723 QPVWIAWGWMEWKEGNIATARQLYQRALSIDATSESAARCLQAWGVLEQRIGNLSAARRL 544 QPVWIAWGWMEWKEGNIATAR++YQRALSID+T+ESAARCLQAWGVLE+R GNLSAARRL Sbjct: 418 QPVWIAWGWMEWKEGNIATAREMYQRALSIDSTTESAARCLQAWGVLEERAGNLSAARRL 477 Query: 543 FRSSLNINSQSYITWMTWAAMEEEQGNSVRAEEIRDLYFQQRTEVVDDASWVMGFLDVID 364 FRSSLNINSQSYITWMTWA+ EE QGN+VRAEEIRDLYFQQRTEVVDDASWVMGFLD+ID Sbjct: 478 FRSSLNINSQSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDDASWVMGFLDIID 537 Query: 363 PALDRIKRLLNFEQKSY---------LKGQQDDDLRGMRXXXXXXXXXXXXEKTSDFDLD 211 PALD IKRLLN +Q SY + G +D + F+LD Sbjct: 538 PALDSIKRLLNLDQNSYYRIPDSSRNIPGADEDSSGPGPGPSSGNPDSNDTASENGFNLD 597 Query: 210 GFIKKKLFLDASKLEV 163 FI++KL LD S L++ Sbjct: 598 AFIREKLSLDPSNLDM 613 >ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus communis] gi|223541537|gb|EEF43086.1| pre-mRNA splicing factor, putative [Ricinus communis] Length = 648 Score = 800 bits (2066), Expect = 0.0 Identities = 408/615 (66%), Positives = 474/615 (77%), Gaps = 15/615 (2%) Frame = -2 Query: 1953 SPSPKSQIPLFSPPPNPTSSKF-----HFNILIKTLHSSPLPKISPFSSRESAPTVEEK- 1792 S S + + LFS N + K+ F+ + T + P+P +SS++S+P ++++ Sbjct: 10 SSSKATSLNLFSSSQNSNNKKYINPASRFSFKVPTKAARPIP----YSSKQSSPVLDQRP 65 Query: 1791 ----LIRLDEENEQGIGSGKEGFLMVRRPVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 1624 R E ++ E L+VRRP + Sbjct: 66 PLSSQSRNREVRKETQKDSFEDLLVVRRPAVEVSGEDSDDEDVVFVNDDKKSSAIIDAGL 125 Query: 1623 E-FAKKMPIFEPERLEL--VTSKEKPLGVNLELALYRAKVLGRNYRFDEAKQVLEKCLSL 1453 E FAKKMPIFEPER+EL +S+EKPL VNL+LALY+AKVL R YRF EA+ +L+KC++ Sbjct: 126 EKFAKKMPIFEPERMELGSSSSQEKPLAVNLDLALYKAKVLARGYRFAEAEVILQKCINY 185 Query: 1452 WPEDGRAYVALGKILSKQSKTMEARAVYERGCQATQGENPYIWQCWAVLENKMGNIRRAR 1273 W EDGRAYVALGKIL+KQSKT EARAVYE+GCQATQGEN YIWQCWAVLENKMGNIRRAR Sbjct: 186 WSEDGRAYVALGKILTKQSKTAEARAVYEKGCQATQGENAYIWQCWAVLENKMGNIRRAR 245 Query: 1272 ELFDAATVADKRHIAAWHGWAVLELKQGNVKKARNLLGKGLRYCGGNEYVYQTLALLEAK 1093 ELFDAATVADKRHIAAWHGWAVLELKQGN+KKAR LL KG+++CGGNEY+YQTLALLEAK Sbjct: 246 ELFDAATVADKRHIAAWHGWAVLELKQGNIKKARQLLAKGIKFCGGNEYIYQTLALLEAK 305 Query: 1092 ANRIEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNFSARQLFEKAIQASPKNRFAWH 913 ANR EQARYLF+QATKCNPKSCASWLAWAQ+E+QQENN +AR+LF+KA+QASPKNRFAWH Sbjct: 306 ANRYEQARYLFRQATKCNPKSCASWLAWAQVEVQQENNLTARELFQKAVQASPKNRFAWH 365 Query: 912 VWGVFEASLGNVDKGRKLLKIGHALNPRDPVLLQSLALLEYKESTANLARVLFRRASELD 733 VWGVFEA++GN++ RKLLKIGH LNPRDPVLLQSLALLEYK STANLARVLFRRASELD Sbjct: 366 VWGVFEANIGNIEMARKLLKIGHTLNPRDPVLLQSLALLEYKHSTANLARVLFRRASELD 425 Query: 732 PRHQPVWIAWGWMEWKEGNIATARQLYQRALSIDATSESAARCLQAWGVLEQRIGNLSAA 553 P+HQPVWIAWGWMEWKEGNI+ AR+LYQRALSID++SESAA+CLQAWGVLEQR+GNLS A Sbjct: 426 PKHQPVWIAWGWMEWKEGNISAARELYQRALSIDSSSESAAKCLQAWGVLEQRVGNLSLA 485 Query: 552 RRLFRSSLNINSQSYITWMTWAAMEEEQGNSVRAEEIRDLYFQQRTEVVDDASWVMGFLD 373 RRLFRSSLNINSQSYITWMTWA EE+QGNSVRAEEIR+LYFQQRTEVVDDASWVMG LD Sbjct: 486 RRLFRSSLNINSQSYITWMTWAQFEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGVLD 545 Query: 372 VIDPALDRIKRLLNFEQ--KSYLKGQQDDDLRGMRXXXXXXXXXXXXEKTSDFDLDGFIK 199 +IDPALD IKRLL F+Q + + S FDLD FIK Sbjct: 546 IIDPALDSIKRLLKFDQNKEQESSSSKPGKYEANANVPSSNADGNLTRSRSGFDLDSFIK 605 Query: 198 KKLFLDASKLEV*ME 154 ++L LD SK++V +E Sbjct: 606 ERLSLDQSKVDVQLE 620 >ref|XP_004134505.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like [Cucumis sativus] Length = 636 Score = 791 bits (2044), Expect = 0.0 Identities = 403/605 (66%), Positives = 463/605 (76%), Gaps = 5/605 (0%) Frame = -2 Query: 1953 SPSPKSQIPLFSPPPNPTS-SKFHFNILIKTLHSSPLP-KISPFSSRESAPTVEEKLIRL 1780 SP + LFS NPT+ SK+ I LHS+ + P S + T + Sbjct: 6 SPPSTASFNLFSSSQNPTNLSKYRCKIFSTHLHSAHNSFSVPPCCSARDSSTA---FLVA 62 Query: 1779 DEENEQGIGSGKEGFLMVRRPVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEFAKKMPI 1600 D +E+ G E + +RRPVM E AKKMPI Sbjct: 63 DRSSERANGETSEEVITIRRPVMEFPGEDEEREVESSTPMIDVRLT------EIAKKMPI 116 Query: 1599 FEPERLELVTSKEKPLGVNLELALYRAKVLGRNYRFDEAKQVLEKCLSLWPEDGRAYVAL 1420 FEPE ++ E+PL +NL+LALYRAK+L RN+++DEA+QVL+KC++ WPEDGRAYVAL Sbjct: 117 FEPENRVDSSALERPLIINLDLALYRAKMLARNFQYDEAQQVLQKCINKWPEDGRAYVAL 176 Query: 1419 GKILSKQSKTMEARAVYERGCQATQGENPYIWQCWAVLENKMGNIRRARELFDAATVADK 1240 GK+L KQ K EA+AVYERGCQATQGEN YIWQCWAVLE++MGNIR+ARELFDAATVA+K Sbjct: 177 GKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 236 Query: 1239 RHIAAWHGWAVLELKQGNVKKARNLLGKGLRYCGGNEYVYQTLALLEAKANRIEQARYLF 1060 +HIAAWHGWAVLELKQGN+KKARNLL KGL+YCGGNEY+YQTLALLEAK+NR EQARYLF Sbjct: 237 KHIAAWHGWAVLELKQGNIKKARNLLAKGLKYCGGNEYIYQTLALLEAKSNRYEQARYLF 296 Query: 1059 KQATKCNPKSCASWLAWAQLEMQQENNFSARQLFEKAIQASPKNRFAWHVWGVFEASLGN 880 KQATKCNPKSCASWLAWAQLEMQ ENN AR+LFEKAIQASPKNRFAWH+WG+FEA+ GN Sbjct: 297 KQATKCNPKSCASWLAWAQLEMQLENNLLARELFEKAIQASPKNRFAWHIWGLFEANTGN 356 Query: 879 VDKGRKLLKIGHALNPRDPVLLQSLALLEYKESTANLARVLFRRASELDPRHQPVWIAWG 700 ++KG KLLKIGH LNPRDPVLLQSL LLEYK S+A+LARVLFRRASELDP+HQPVWIAWG Sbjct: 357 IEKGMKLLKIGHVLNPRDPVLLQSLGLLEYKNSSASLARVLFRRASELDPKHQPVWIAWG 416 Query: 699 WMEWKEGNIATARQLYQRALSIDATSESAARCLQAWGVLEQRIGNLSAARRLFRSSLNIN 520 WMEWKEGNI AR+LYQRAL ID+ SESAARCLQAWGVLEQR+GNLSAARRL+RSSLNIN Sbjct: 417 WMEWKEGNIVKARELYQRALLIDSDSESAARCLQAWGVLEQRVGNLSAARRLYRSSLNIN 476 Query: 519 SQSYITWMTWAAMEEEQGNSVRAEEIRDLYFQQRTEVVDDASWVMGFLDVIDPALDRIKR 340 SQSY+TWMTWAA+EE+QGN++RAEEIR+LYFQQRTEVVDDASWVMGFLDVIDPALD IKR Sbjct: 477 SQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGFLDVIDPALDSIKR 536 Query: 339 LLNFEQKSYLKGQQDDD---LRGMRXXXXXXXXXXXXEKTSDFDLDGFIKKKLFLDASKL 169 LL EQ + + D + E + FDLD FI KKL +D SKL Sbjct: 537 LLKLEQDPFTASRTADGGPRNTSIDDSAASSSSNNVGESETGFDLDAFIMKKLSIDTSKL 596 Query: 168 EV*ME 154 E+ ME Sbjct: 597 EIQME 601 >ref|XP_004165485.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic-like [Cucumis sativus] Length = 636 Score = 790 bits (2040), Expect = 0.0 Identities = 403/605 (66%), Positives = 462/605 (76%), Gaps = 5/605 (0%) Frame = -2 Query: 1953 SPSPKSQIPLFSPPPNPTS-SKFHFNILIKTLHSSPLP-KISPFSSRESAPTVEEKLIRL 1780 SP + LFS NPT+ SK+ I LHS+ + P S + T + Sbjct: 6 SPPSTASFNLFSSSQNPTNLSKYRCKIFSTHLHSAHNSLSVPPCCSARDSSTA---FLVA 62 Query: 1779 DEENEQGIGSGKEGFLMVRRPVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEFAKKMPI 1600 D +E+ G E + +RRPVM E AKKMPI Sbjct: 63 DRSSERANGETSEEVITIRRPVMEFPGEDEEREVESSTPMLDVRLT------EIAKKMPI 116 Query: 1599 FEPERLELVTSKEKPLGVNLELALYRAKVLGRNYRFDEAKQVLEKCLSLWPEDGRAYVAL 1420 FEPE ++ E+PL +NL+LALYRAK+L RN+++DEA+QVL+KC++ WPEDGRAYVAL Sbjct: 117 FEPENRVDSSALERPLIINLDLALYRAKMLARNFQYDEAQQVLQKCINKWPEDGRAYVAL 176 Query: 1419 GKILSKQSKTMEARAVYERGCQATQGENPYIWQCWAVLENKMGNIRRARELFDAATVADK 1240 GK+L KQ K EA+AVYERGCQATQGEN YIWQCWAVLE++MGNIR+ARELFDAATVA+K Sbjct: 177 GKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 236 Query: 1239 RHIAAWHGWAVLELKQGNVKKARNLLGKGLRYCGGNEYVYQTLALLEAKANRIEQARYLF 1060 +HIAAWHGWAVLELKQGN+KKARNLL KGL+YCGGNEY+YQTLALLEAK+NR EQARYLF Sbjct: 237 KHIAAWHGWAVLELKQGNIKKARNLLAKGLKYCGGNEYIYQTLALLEAKSNRYEQARYLF 296 Query: 1059 KQATKCNPKSCASWLAWAQLEMQQENNFSARQLFEKAIQASPKNRFAWHVWGVFEASLGN 880 KQATKCNPKSCASWLAWAQLEMQ ENN AR+LFEKAIQASPKNRFAWH+WG+FEA+ GN Sbjct: 297 KQATKCNPKSCASWLAWAQLEMQLENNLLARELFEKAIQASPKNRFAWHIWGLFEANTGN 356 Query: 879 VDKGRKLLKIGHALNPRDPVLLQSLALLEYKESTANLARVLFRRASELDPRHQPVWIAWG 700 ++KG KLLKIGH LNPRDPVLLQSL LLEYK S+A+LARVLFRRASELDP+HQPVWIAWG Sbjct: 357 IEKGMKLLKIGHVLNPRDPVLLQSLGLLEYKNSSASLARVLFRRASELDPKHQPVWIAWG 416 Query: 699 WMEWKEGNIATARQLYQRALSIDATSESAARCLQAWGVLEQRIGNLSAARRLFRSSLNIN 520 WMEWKEGNI AR+LYQRAL ID+ SESAARCLQAWGVLEQR GNLSAARRL+RSSLNIN Sbjct: 417 WMEWKEGNIVKARELYQRALLIDSDSESAARCLQAWGVLEQRAGNLSAARRLYRSSLNIN 476 Query: 519 SQSYITWMTWAAMEEEQGNSVRAEEIRDLYFQQRTEVVDDASWVMGFLDVIDPALDRIKR 340 SQSY+TWMTWAA+EE+QGN++RAEEIR+LYFQQRTEVVDDASWVMGFLDVIDPALD IKR Sbjct: 477 SQSYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGFLDVIDPALDSIKR 536 Query: 339 LLNFEQKSYLKGQQDDD---LRGMRXXXXXXXXXXXXEKTSDFDLDGFIKKKLFLDASKL 169 LL EQ + + D + E + FDLD FI KKL +D SKL Sbjct: 537 LLKLEQDPFTASRTADGGPRNTSIDDSAASSSSNNVGESETGFDLDAFIMKKLSIDTSKL 596 Query: 168 EV*ME 154 E+ ME Sbjct: 597 EIQME 601