BLASTX nr result

ID: Cimicifuga21_contig00008180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008180
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO61379.1| serine hydroxymethyltransferase [Populus tremuloi...    61   8e-08
ref|XP_002301022.1| serine hydroxymethyltransferase 4 [Populus t...    60   2e-07
ref|XP_002307405.1| serine hydroxymethyltransferase 5 [Populus t...    59   3e-07
gb|ABO61380.1| serine hydroxymethyltransferase [Populus tremuloi...    59   3e-07
ref|XP_003527921.1| PREDICTED: serine hydroxymethyltransferase 2...    56   3e-06

>gb|ABO61379.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 555

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = -2

Query: 340 KDFLKGLHGNKDVVELRNRVESFASHFEMPAFDI 239
           KDFLKGLH NKD+VELRNRVE FAS F MP FDI
Sbjct: 522 KDFLKGLHNNKDIVELRNRVEIFASQFAMPGFDI 555


>ref|XP_002301022.1| serine hydroxymethyltransferase 4 [Populus trichocarpa]
           gi|222842748|gb|EEE80295.1| serine
           hydroxymethyltransferase 4 [Populus trichocarpa]
          Length = 555

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -2

Query: 340 KDFLKGLHGNKDVVELRNRVESFASHFEMPAFDI 239
           KDFLKGLH N+D+VELRNRVE FAS F MP FDI
Sbjct: 522 KDFLKGLHNNRDIVELRNRVEIFASQFAMPGFDI 555


>ref|XP_002307405.1| serine hydroxymethyltransferase 5 [Populus trichocarpa]
           gi|222856854|gb|EEE94401.1| serine
           hydroxymethyltransferase 5 [Populus trichocarpa]
          Length = 552

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2

Query: 340 KDFLKGLHGNKDVVELRNRVESFASHFEMPAFDI 239
           KDFLKGLH NK++VELRNRVE FAS F MP FD+
Sbjct: 519 KDFLKGLHNNKEIVELRNRVEIFASQFAMPGFDV 552


>gb|ABO61380.1| serine hydroxymethyltransferase [Populus tremuloides]
          Length = 552

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = -2

Query: 340 KDFLKGLHGNKDVVELRNRVESFASHFEMPAFDI 239
           KDFLKGLH NK++VELRNRVE FAS F MP FD+
Sbjct: 519 KDFLKGLHNNKEIVELRNRVEIFASQFAMPGFDV 552


>ref|XP_003527921.1| PREDICTED: serine hydroxymethyltransferase 2-like [Glycine max]
          Length = 548

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 340 KDFLKGLHGNKDVVELRNRVESFASHFEMPAFDI 239
           KDFLKGL  NKD+ ELRNRVE+F+S F MP FDI
Sbjct: 515 KDFLKGLQNNKDISELRNRVETFSSQFAMPGFDI 548


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