BLASTX nr result

ID: Cimicifuga21_contig00008158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008158
         (1313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...   220   7e-55
ref|XP_002531488.1| serine/arginine rich splicing factor, putati...   214   3e-53
ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cuc...   212   1e-52
ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216...   212   1e-52
gb|ABB29919.1| unknown [Solanum tuberosum]                            212   1e-52

>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
           gi|302141951|emb|CBI19154.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  220 bits (560), Expect = 7e-55
 Identities = 105/115 (91%), Positives = 110/115 (95%)
 Frame = +3

Query: 54  MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 233
           MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 234 FVRYKYADEAQKAVERLDGRTVDGRDIMVQFAKYGPNAERIHKGRVIEKIGKTSG 398
           FVRYKYADEAQKAVE+LDGR VDGR+IMVQFAKYGPNAERIHKGR+IE   K+ G
Sbjct: 61  FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRIIETSSKSKG 115


>ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528897|gb|EEF30895.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  214 bits (546), Expect = 3e-53
 Identities = 103/113 (91%), Positives = 108/113 (95%)
 Frame = +3

Query: 54  MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 233
           MSHFGRSGPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 234 FVRYKYADEAQKAVERLDGRTVDGRDIMVQFAKYGPNAERIHKGRVIEKIGKT 392
           FVRYKYADEAQKAVERLDGR VDGR+I VQFAKYGPNAERIHKGR+IE + ++
Sbjct: 61  FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRIIEPVPRS 113


>ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
          Length = 251

 Score =  212 bits (540), Expect = 1e-52
 Identities = 100/115 (86%), Positives = 109/115 (94%)
 Frame = +3

Query: 54  MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 233
           MSHFGRSGPPDIRDTYSLLVLNITFRTTADDL+PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 234 FVRYKYADEAQKAVERLDGRTVDGRDIMVQFAKYGPNAERIHKGRVIEKIGKTSG 398
           FVRYKYADEAQKA+++LDGR +DGR+IMVQFAKYGPNAE+I KGRV+E   KT G
Sbjct: 61  FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRG 115


>ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
          Length = 257

 Score =  212 bits (540), Expect = 1e-52
 Identities = 100/115 (86%), Positives = 109/115 (94%)
 Frame = +3

Query: 54  MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 233
           MSHFGRSGPPDIRDTYSLLVLNITFRTTADDL+PLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 234 FVRYKYADEAQKAVERLDGRTVDGRDIMVQFAKYGPNAERIHKGRVIEKIGKTSG 398
           FVRYKYADEAQKA+++LDGR +DGR+IMVQFAKYGPNAE+I KGRV+E   KT G
Sbjct: 61  FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRG 115


>gb|ABB29919.1| unknown [Solanum tuberosum]
          Length = 258

 Score =  212 bits (540), Expect = 1e-52
 Identities = 99/115 (86%), Positives = 109/115 (94%)
 Frame = +3

Query: 54  MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 233
           MSHFGRSGPPDI+DTYSLLVLN+TFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 234 FVRYKYADEAQKAVERLDGRTVDGRDIMVQFAKYGPNAERIHKGRVIEKIGKTSG 398
           FVRYKY DEAQKAVE+LDGR VDGR+IMV+FAKYGPNAERI KGR++E + +T G
Sbjct: 61  FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVQRTKG 115


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