BLASTX nr result

ID: Cimicifuga21_contig00008147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008147
         (1811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription...   254   7e-65
gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]    246   2e-62
ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription...   234   4e-59
gb|ACY25088.1| DREB1C [Gossypium hirsutum]                            228   5e-57
ref|XP_002307098.1| AP2/ERF domain-containing transcription fact...   227   9e-57

>ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
            [Vitis vinifera]
          Length = 374

 Score =  254 bits (648), Expect = 7e-65
 Identities = 165/388 (42%), Positives = 200/388 (51%), Gaps = 19/388 (4%)
 Frame = +1

Query: 436  MATRIDMYRSNSGGSMFGDPFREELMMALQPFIKXXXXXXXXXXXXXXXXXXXXXXXXXX 615
            MA  ID+Y S+   ++F +  REELM AL+PF+K                          
Sbjct: 1    MAAAIDIYSSSR--TVFSE--REELMKALEPFMKGASSTSSLTSPYPYPSTSSLSPPSTS 56

Query: 616  XXXXXXXL---------CIPDVCSTSNTPMFSQGFSS--QFGLEQTGSIGLN-LTPSXXX 759
                               PD CSTS T MFSQGFS   Q GLEQT SIGLN +TP+   
Sbjct: 57   SSSLPFFSYPPDSTQPNMYPDFCSTSTTHMFSQGFSGYDQMGLEQTRSIGLNHITPAQIL 116

Query: 760  XXXXXXXXXXXXXXXXXHLASMAAAASIHNHKXXXXXXXXXXXXXSPRAIPMKQVGTSSK 939
                              +A++A A+SI N +              P+AIPMKQVGT  K
Sbjct: 117  QIQAQIQFQQQQQQ---RMAAVATASSIQNQRLSQWQQQHNLNFLGPKAIPMKQVGTPPK 173

Query: 940  PTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDLARLNF 1119
            P KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RG+ ARLNF
Sbjct: 174  PAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEFARLNF 233

Query: 1120 PHLRHQGSHVGGEFGDYKPLHSSVDAKLEAICQSL----KQGNLSKPAVGTSAKKTTVSK 1287
            P+LRHQGS V GEFGDYKPLHSSVDAKL+AICQ+L    KQGN  KP +   AK  + + 
Sbjct: 234  PNLRHQGSLVAGEFGDYKPLHSSVDAKLQAICQNLAISQKQGNSGKPGLVADAKIESSTH 293

Query: 1288 QSLVDQQTIATIVDDSSHGESDFLGSEDIKLE---NXXXXXXXXXXXXXXXXXXXXFKFQ 1458
            Q+         ++D+SS  ES FLG ED K+E   +                      F 
Sbjct: 294  QA-------EMVLDNSSDPESGFLGLEDCKVEISSSSSSPSPSDESSAGSSSPESDISFL 346

Query: 1459 DFTAVPLYENNSFNLQKFPSFDVDWEAI 1542
            DFT     ++    L+KFPS ++DW +I
Sbjct: 347  DFTDSQWNDSECLTLEKFPSVEIDWASI 374


>gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]
          Length = 379

 Score =  246 bits (627), Expect = 2e-62
 Identities = 164/393 (41%), Positives = 201/393 (51%), Gaps = 24/393 (6%)
 Frame = +1

Query: 436  MATRIDMYRSNSGGSMFGDPFREELMMALQPFIKXXXXXXXXXXXXXXXXXXXXXXXXXX 615
            MA  ID+Y S+   ++F +  REELM AL+PF+K                          
Sbjct: 1    MAAAIDIYSSSR--TVFSE--REELMKALEPFMKGASSTSSLTSPYPYPSTSSLSPPSTS 56

Query: 616  XXXXXXXLCIPD---------VCSTSNTPMFSQGFSS--QFGLEQTGSIGLN-LTPSXXX 759
                      PD          CSTS T MFSQGF    Q GLEQTGSIGLN +TP+   
Sbjct: 57   SSSLPFFSYPPDSTQPNMYPGFCSTSTTHMFSQGFLGYDQMGLEQTGSIGLNHITPAQIL 116

Query: 760  XXXXXXXXXXXXXXXXXHLASMAAAASIHNHKXXXXXXXXXXXXXS-----PRAIPMKQV 924
                              +A++A A+SI N +             +     P+AIPMKQV
Sbjct: 117  QIQAQIQFQQQQQQ---RMAAVATASSIQNQRLSQWQQQQQQQQHTLNFLGPKAIPMKQV 173

Query: 925  GTSSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDL 1104
            GT  KP KLYRGVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RG+ 
Sbjct: 174  GTPPKPAKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAFKLRGEF 233

Query: 1105 ARLNFPHLRHQGSHVGGEFGDYKPLHSSVDAKLEAICQSL----KQGNLSKPAVGTSAKK 1272
            ARLNFP+LRHQGS V GEFGDYKPLHSSVDAKL+AICQ+L    KQGN  KP + + AK 
Sbjct: 234  ARLNFPNLRHQGSLVAGEFGDYKPLHSSVDAKLQAICQNLAISQKQGNSGKPGLVSDAKI 293

Query: 1273 TTVSKQSLVDQQTIATIVDDSSHGESDFLGSEDIKLE---NXXXXXXXXXXXXXXXXXXX 1443
             + + Q+         ++D+SS  ES FLG ED K+E   +                   
Sbjct: 294  ESSTHQA-------EMVLDNSSDPESGFLGLEDCKVEISSSSSSPSPSDESSAGSSSPES 346

Query: 1444 XFKFQDFTAVPLYENNSFNLQKFPSFDVDWEAI 1542
                 DFT     ++    L+KFPS ++DW +I
Sbjct: 347  DISLLDFTDSQWNDSECLTLEKFPSVEIDWASI 379


>ref|XP_002285802.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
            isoform 1 [Vitis vinifera]
          Length = 367

 Score =  234 bits (598), Expect = 4e-59
 Identities = 162/383 (42%), Positives = 188/383 (49%), Gaps = 12/383 (3%)
 Frame = +1

Query: 436  MATRIDMYRSN--SGGSMFGDPFREELMMALQPFIKXXXXXXXXXXXXXXXXXXXXXXXX 609
            MA  +D Y S      S  G     ELM AL+PF+K                        
Sbjct: 1    MAPTVDFYSSRPLQSASCGG-----ELMEALEPFMKNASSTSPSSTLSPSSSPSTSSFYP 55

Query: 610  XXXXXXXXXLCIPDVCSTSNTPMFSQGFSSQF--GLEQTGSIGLN-LTPSXXXXXXXXXX 780
                        PD CSTS T + SQGFSS    G E +G IGLN LTPS          
Sbjct: 56   SSDFYSPISTQYPDGCSTSTTHVISQGFSSHDLQGFEHSGPIGLNHLTPSQIHQIQAQIQ 115

Query: 781  XXXXXXXXXXHLASMAAAASIHNHKXXXXXXXXXXXXX-SPRAIPMKQVGTSSKPTKLYR 957
                      H+ ++AAAAS +                 SP+ IPMKQVG   KPTKLYR
Sbjct: 116  LQQHHN----HMPAVAAAASFNTQNLPQWQQRQQAPNFLSPKPIPMKQVGVPPKPTKLYR 171

Query: 958  GVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDLARLNFPHLRHQ 1137
            GVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RGD ARLNFP+LRHQ
Sbjct: 172  GVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQ 231

Query: 1138 GSHVGGEFGDYKPLHSSVDAKLEAICQSL----KQGNLSKPAVGTSAKKTTVSKQSLVDQ 1305
            GSH+GGEFGDYKPLHSSVDAKL+AICQSL    KQG   KP  G  ++   V+  +    
Sbjct: 232  GSHIGGEFGDYKPLHSSVDAKLQAICQSLAETQKQG---KPTQGKKSRSRAVAPSA---- 284

Query: 1306 QTIATIVDDSSHGESDFLGSEDIKLENXXXXXXXXXXXXXXXXXXXXFKF-QDFTAVPLY 1482
                T+ + S+  E    GSED K+E                       F  D    P Y
Sbjct: 285  SQPVTVSESSTLSEQ---GSEDCKVEPTSSSMFTESDGSGGSSPLSDLTFPDDCEEAPFY 341

Query: 1483 EN-NSFNLQKFPSFDVDWEAILS 1548
                +FNLQK+PS ++DW AI S
Sbjct: 342  GAWENFNLQKYPSNEIDWAAISS 364


>gb|ACY25088.1| DREB1C [Gossypium hirsutum]
          Length = 351

 Score =  228 bits (580), Expect = 5e-57
 Identities = 156/383 (40%), Positives = 187/383 (48%), Gaps = 14/383 (3%)
 Frame = +1

Query: 436  MATRIDMYRSNSGGSMFGDPFREELMMALQPFIKXXXXXXXXXXXXXXXXXXXXXXXXXX 615
            MA  IDMY SNS  S+F DPF  ELM AL+PF+K                          
Sbjct: 1    MAAAIDMYNSNSNSSVFSDPFSAELMKALEPFMKSASSTSPLSSSSSYSQSNLY------ 54

Query: 616  XXXXXXXLCIPDVCSTSNTPMFS-QGFSSQ---FGLEQTGSIGLN-LTPSXXXXXXXXXX 780
                      P+ CS   T + S QGF +     G EQTGSIGLN LTPS          
Sbjct: 55   ----------PEFCSPWRTHLCSEQGFCNYQNLMGFEQTGSIGLNQLTPSQILQIQAQIY 104

Query: 781  XXXXXXXXXXHLASMAAAASIHNHKXXXXXXXXXXXXXSPRAIPMKQVG-TSSKPTKLYR 957
                       +AS +  AS+ N +             SP+A+PMK V  T  KPTKLYR
Sbjct: 105  QQQQQQQ---EVASKSTTASLKNQRFNFL---------SPKAVPMKHVSSTPPKPTKLYR 152

Query: 958  GVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDLARLNFPHLRHQ 1137
            GVRQRHWGKWVAEIRLP+NRTRLWLGTFDT               RG+ ARLNFPHL+HQ
Sbjct: 153  GVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGEFARLNFPHLKHQ 212

Query: 1138 GSHVGGEFGDYKPLHSSVDAKLEAICQSL-KQGNLSK----PAVGTSAKKTTVSKQSLVD 1302
            G+H+ GEFGDYKPLHS+VDAKL+AICQSL KQ N  K    P      +     K+   D
Sbjct: 213  GAHISGEFGDYKPLHSAVDAKLQAICQSLQKQENSGKGCSVPDSNPKVEFDYPVKREEFD 272

Query: 1303 QQ---TIATIVDDSSHGESDFLGSEDIKLENXXXXXXXXXXXXXXXXXXXXFKFQDFTAV 1473
            Q        +  +S    S    S D+  E+                      F DF+  
Sbjct: 273  QSPRFASPKVEMNSLSSSSSSPSSPDLSDES----------LAGSSSPESDITFFDFSDS 322

Query: 1474 PLYENNSFNLQKFPSFDVDWEAI 1542
               +N  F L+K+PS ++DWEAI
Sbjct: 323  KWDDNEIFGLEKYPSVEIDWEAI 345


>ref|XP_002307098.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222856547|gb|EEE94094.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 372

 Score =  227 bits (578), Expect = 9e-57
 Identities = 156/390 (40%), Positives = 193/390 (49%), Gaps = 21/390 (5%)
 Frame = +1

Query: 436  MATRIDMYRSNSGGSMFGDPFREELMMALQPFIKXXXXXXXXXXXXXXXXXXXXXXXXXX 615
            MA  ID+Y  N+   +F DP REELM AL+PF+K                          
Sbjct: 1    MAAAIDIY--NTTVPVFSDPCREELMKALEPFMKSASPSPTSTYSSPSPSTSSPPFSSHP 58

Query: 616  XXXXXXXLCIPDV-------CSTSNTPMFSQGFS--SQFGLEQTGSIGLN-LTPSXXXXX 765
                     I          CS ++T MFS GF   +Q G EQTG IGLN LTPS     
Sbjct: 59   SCFYNNNSLISSYPNLDLSFCSPTSTQMFSNGFLDYNQMGFEQTGPIGLNHLTPSQILQI 118

Query: 766  XXXXXXXXXXXXXXXHLASMAAAASIHNHKXXXXXXXXXXXXXSPRAIPMKQVGTS-SKP 942
                           +LA+   +  +HN +             +P+ +PMKQ   S  KP
Sbjct: 119  QAKIHFQQQQQQKMENLAT-TTSQFVHNQRASNFL--------APKPVPMKQSAASPQKP 169

Query: 943  TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTXXXXXXXXXXXXXXXRGDLARLNFP 1122
            TKLYRGVRQRHWGKWVAEIRLP+NRTRLWLGT+DT               RG+ ARLNFP
Sbjct: 170  TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTYDTAEEAALAYDNAAYKLRGEYARLNFP 229

Query: 1123 HLRHQGSHVGGEFGDYKPLHSSVDAKLEAICQSL---KQGNLSKPAVGTSAKKTTVSKQS 1293
            HLRHQG+HV GEFGDYKPLHSSVDAKL+AICQSL   KQG   +P+   ++KKT  +   
Sbjct: 230  HLRHQGAHVSGEFGDYKPLHSSVDAKLQAICQSLGLQKQGKTREPSSVANSKKTATAPLQ 289

Query: 1294 LVDQQTIATIVDDSS-----HGESDFLGSEDIKLE-NXXXXXXXXXXXXXXXXXXXXFKF 1455
                   A I DD S       E +  G ED K+E                        F
Sbjct: 290  -------AKIEDDCSLRGELKTEYENFGVEDYKVEIPSPSPASSDESLAGSSSPESEISF 342

Query: 1456 QDFT-AVPLYENNSFNLQKFPSFDVDWEAI 1542
             DF+ ++   E  +F L+K+PS ++DW +I
Sbjct: 343  LDFSGSLQWDEFENFGLEKYPSVEIDWSSI 372


Top