BLASTX nr result

ID: Cimicifuga21_contig00008146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008146
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525569.1| nascent polypeptide associated complex alpha...   136   2e-30
gb|ABK93224.1| unknown [Populus trichocarpa]                          135   5e-30
ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   133   2e-29
ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
gb|ABK92784.1| unknown [Populus trichocarpa]                          131   6e-29

>ref|XP_002525569.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223535148|gb|EEF36828.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 131

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/85 (84%), Positives = 76/85 (89%)
 Frame = -2

Query: 534 KIEDXXXXXXXXXAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGV 355
           KIED         AEQFKAPDLSHVISKPE+SAMAQDDE+VDETGVEPKDIELVMTQAGV
Sbjct: 47  KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAMAQDDEEVDETGVEPKDIELVMTQAGV 106

Query: 354 TRSKAVKALKAADGDIVTAIMELTN 280
           +RSKAVKALKAADGDIV+AIMELTN
Sbjct: 107 SRSKAVKALKAADGDIVSAIMELTN 131


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  135 bits (339), Expect = 5e-30
 Identities = 71/85 (83%), Positives = 76/85 (89%)
 Frame = -2

Query: 534 KIEDXXXXXXXXXAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGV 355
           KIED         AEQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGV
Sbjct: 121 KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGV 180

Query: 354 TRSKAVKALKAADGDIVTAIMELTN 280
           +RSKAVKALKAADGDIV+AIMELTN
Sbjct: 181 SRSKAVKALKAADGDIVSAIMELTN 205


>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  133 bits (334), Expect = 2e-29
 Identities = 70/85 (82%), Positives = 76/85 (89%)
 Frame = -2

Query: 534 KIEDXXXXXXXXXAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGV 355
           KIED         AEQFKAPDLS+VI+KPE+S+MAQDDEDVDETGVEPKDIELVMTQAGV
Sbjct: 118 KIEDLSSQLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIELVMTQAGV 177

Query: 354 TRSKAVKALKAADGDIVTAIMELTN 280
           +RSKAVKALKAADGDIV+AIMELTN
Sbjct: 178 SRSKAVKALKAADGDIVSAIMELTN 202


>ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|222841393|gb|EEE78940.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  132 bits (333), Expect = 2e-29
 Identities = 70/84 (83%), Positives = 75/84 (89%)
 Frame = -2

Query: 534 KIEDXXXXXXXXXAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGV 355
           KIED         AEQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGV
Sbjct: 43  KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGV 102

Query: 354 TRSKAVKALKAADGDIVTAIMELT 283
           +RSKAVKALKAADGDIV+AIMELT
Sbjct: 103 SRSKAVKALKAADGDIVSAIMELT 126


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  131 bits (330), Expect = 6e-29
 Identities = 69/84 (82%), Positives = 75/84 (89%)
 Frame = -2

Query: 534 KIEDXXXXXXXXXAEQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGV 355
           KIED         AEQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGV
Sbjct: 120 KIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAVAQDDEEVDETGVEPKDIELVMTQAGV 179

Query: 354 TRSKAVKALKAADGDIVTAIMELT 283
           +RSKAVKALKAADGDIV+AIM+LT
Sbjct: 180 SRSKAVKALKAADGDIVSAIMDLT 203


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