BLASTX nr result

ID: Cimicifuga21_contig00008113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008113
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318688.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22
ref|XP_002322208.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-21
ref|XP_002279764.1| PREDICTED: serine/threonine-protein kinase A...   106   1e-20
emb|CAN67679.1| hypothetical protein VITISV_035275 [Vitis vinifera]   106   1e-20
ref|XP_003523112.1| PREDICTED: serine/threonine-protein kinase A...   104   6e-20

>ref|XP_002318688.1| predicted protein [Populus trichocarpa] gi|222859361|gb|EEE96908.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  112 bits (281), Expect = 2e-22
 Identities = 54/63 (85%), Positives = 56/63 (88%), Gaps = 4/63 (6%)
 Frame = +3

Query: 1206 AQLGMFCGQEVGNFTSYAPS----DHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDNL 1373
            AQ+G+FCGQEVGN  SYA S    DHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDNL
Sbjct: 30   AQVGIFCGQEVGNVASYASSGAISDHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDNL 89

Query: 1374 TSR 1382
            TSR
Sbjct: 90   TSR 92


>ref|XP_002322208.1| predicted protein [Populus trichocarpa] gi|222869204|gb|EEF06335.1|
            predicted protein [Populus trichocarpa]
          Length = 427

 Score =  110 bits (274), Expect = 1e-21
 Identities = 53/63 (84%), Positives = 55/63 (87%), Gaps = 4/63 (6%)
 Frame = +3

Query: 1206 AQLGMFCGQEVGNFTSYAPS----DHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDNL 1373
            AQ+G FCGQEVGN  SYA S    DHTSSLFVKGVA+NGSPPWREDDKDGHYMFALGDNL
Sbjct: 30   AQVGNFCGQEVGNVASYASSGAISDHTSSLFVKGVAQNGSPPWREDDKDGHYMFALGDNL 89

Query: 1374 TSR 1382
            TSR
Sbjct: 90   TSR 92


>ref|XP_002279764.1| PREDICTED: serine/threonine-protein kinase AFC2 [Vitis vinifera]
            gi|297733679|emb|CBI14926.3| unnamed protein product
            [Vitis vinifera]
          Length = 435

 Score =  106 bits (265), Expect = 1e-20
 Identities = 51/64 (79%), Positives = 55/64 (85%), Gaps = 5/64 (7%)
 Frame = +3

Query: 1206 AQLGMFCGQEVGNFTSYAPS-----DHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDN 1370
            AQLGMFCGQEVGN  S+APS       TSS+FVKGVARNGSPPWREDDKDGHY+FALG+N
Sbjct: 36   AQLGMFCGQEVGNVASFAPSKAHSDQTTSSMFVKGVARNGSPPWREDDKDGHYIFALGEN 95

Query: 1371 LTSR 1382
            LTSR
Sbjct: 96   LTSR 99



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
 Frame = +3

Query: 186 MEM-ECPTEFPHTHMDRRPRKRPRLAWDVVPQAPK 287
           MEM E  TEFPHTHMDRRPRKRPRL WDV+PQAPK
Sbjct: 1   MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQAPK 35


>emb|CAN67679.1| hypothetical protein VITISV_035275 [Vitis vinifera]
          Length = 421

 Score =  106 bits (265), Expect = 1e-20
 Identities = 51/64 (79%), Positives = 55/64 (85%), Gaps = 5/64 (7%)
 Frame = +3

Query: 1206 AQLGMFCGQEVGNFTSYAPS-----DHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDN 1370
            AQLGMFCGQEVGN  S+APS       TSS+FVKGVARNGSPPWREDDKDGHY+FALG+N
Sbjct: 36   AQLGMFCGQEVGNVASFAPSKAHSDQTTSSMFVKGVARNGSPPWREDDKDGHYIFALGEN 95

Query: 1371 LTSR 1382
            LTSR
Sbjct: 96   LTSR 99



 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
 Frame = +3

Query: 186 MEM-ECPTEFPHTHMDRRPRKRPRLAWDVVPQAPK 287
           MEM E  TEFPHTHMDRRPRKRPRL WDV+PQAPK
Sbjct: 1   MEMVERVTEFPHTHMDRRPRKRPRLGWDVLPQAPK 35


>ref|XP_003523112.1| PREDICTED: serine/threonine-protein kinase AFC2-like isoform 2
            [Glycine max]
          Length = 427

 Score =  104 bits (259), Expect = 6e-20
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = +3

Query: 1206 AQLGMFCGQEVGNFTSYAPSDHTSSLFVKGVARNGSPPWREDDKDGHYMFALGDNLTSR 1382
            AQ+G+FCGQEV N +SYAPS+H  S   KGVARNGSPPWR+DDKDGHYMF LGDNLTSR
Sbjct: 34   AQVGLFCGQEVENISSYAPSEHPPSSLFKGVARNGSPPWRDDDKDGHYMFELGDNLTSR 92


Top