BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008101
         (1972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   743   0.0  
ref|XP_002303572.1| predicted protein [Populus trichocarpa] gi|2...   693   0.0  
ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putativ...   688   0.0  
ref|XP_004147988.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   681   0.0  
ref|NP_001047522.1| Os02g0636300 [Oryza sativa Japonica Group] g...   666   0.0  

>ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial
            [Vitis vinifera] gi|147852111|emb|CAN82264.1|
            hypothetical protein VITISV_009282 [Vitis vinifera]
          Length = 557

 Score =  743 bits (1919), Expect = 0.0
 Identities = 391/556 (70%), Positives = 452/556 (81%), Gaps = 4/556 (0%)
 Frame = +3

Query: 150  MLTLISARLLFSCGDSLPIKKLCFVPRPAKFHSSVRFQNRMDRQNAPLTLATLGFKSELE 329
            M  L S RLL   GD LP+ KL  V R   FH SVRF +R+DR++ PLTLA+LGFKSE E
Sbjct: 1    MQALASTRLLLLVGDCLPVGKLLHVSR---FHGSVRFLSRVDREHGPLTLASLGFKSEFE 57

Query: 330  KEKSNKTNKIIPMSSAKYVPKIEKKPMRSSAVKAVGVKVPVEIEAAPFAAKTFSELGLPP 509
              K NKT  +  +++   V K + K +RS+ +KAVG K  +EIEAAPFAAK+FSELGLPP
Sbjct: 58   TTKGNKTKPLHQLNAVPEVSKNKVKAVRSNEMKAVGTKKSIEIEAAPFAAKSFSELGLPP 117

Query: 510  LLIEQLDKVGLTTPTDVQSTAIPTISENRDVIIQSYTGSGKTLAYLLPILAAVGPLKLSS 689
            LLI++L++ G + PTDVQS AIPTI +N DV+IQSYTGSGKTLAYLLPIL+ VGPLK   
Sbjct: 118  LLIDRLEREGFSVPTDVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLKNKP 177

Query: 690  DTEDPDK--KKGIEAVIVAPSRELGMQIVREAEKLLGPAHKKAVQQLVGGANRSRQEEAL 863
               D     K  IEAVI+APSRELGMQIVRE EKLLGPA KK VQQLVGGANR+RQEEAL
Sbjct: 178  PNADNTSRNKMEIEAVILAPSRELGMQIVREVEKLLGPADKKLVQQLVGGANRTRQEEAL 237

Query: 864  KKNKPSIVVGTPGRVAEISAAGKLQTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRA 1043
            KKNKPSIVVGTPGR+AE+SA+GKL+THGCR+LVLDEVDELLSFNFRED+HRILEHVG+R+
Sbjct: 238  KKNKPSIVVGTPGRIAEMSASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVGRRS 297

Query: 1044 GVEQPSKALAPLARRVERQTILVSATVPFSVIRAAKSWGRDPLLVRAKSVLPLESIPPSG 1223
            G + P    +PL RR ERQTI+VSATVPFSVIRAA+SWGRDPLLV+AKSV+PLES+P +G
Sbjct: 298  GAD-PHGTKSPLERRTERQTIMVSATVPFSVIRAARSWGRDPLLVQAKSVIPLESLP-TG 355

Query: 1224 SASV--PGLTSSSTSNVTTQGTAESLPPVLKHYYCVTRAQHKIDTLRKCVHALDAKYVIA 1397
              ++  P  TSSS+S++ TQ  AE LPPVLKHY+CVT+ QHKIDTLR+CVHALDAK VIA
Sbjct: 356  PVNLLGPTSTSSSSSSLQTQAAAEGLPPVLKHYFCVTKLQHKIDTLRRCVHALDAKCVIA 415

Query: 1398 FMNHTRRLKDVVFKLEARGIKAAELHGDIGKLARSTVLKKFKGGEVRVLVTNELSARGLD 1577
            FMNHT+RLKD VFKLEARG+KAAELHGD+GKLARST LKKFK GEVRVLVTNELSARGLD
Sbjct: 416  FMNHTKRLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLD 475

Query: 1578 VAECDLVVNLDLPTDSIHYXXXXXXXXXXXXXXSVVTICEESEVFVVNKMQRQLGVPIQN 1757
            V+ECDLVVNLDLPTDSIHY              +VV ICEE EVFVV K+QRQLGVPIQ 
Sbjct: 476  VSECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVNICEEPEVFVVKKLQRQLGVPIQA 535

Query: 1758 CDFTEGNLVVSTEEKE 1805
            C+FTEG LV +T+E++
Sbjct: 536  CEFTEGKLVATTDEEK 551


>ref|XP_002303572.1| predicted protein [Populus trichocarpa] gi|222841004|gb|EEE78551.1|
            predicted protein [Populus trichocarpa]
          Length = 563

 Score =  693 bits (1789), Expect = 0.0
 Identities = 369/558 (66%), Positives = 436/558 (78%), Gaps = 6/558 (1%)
 Frame = +3

Query: 150  MLTLISARLLFSCGDSLPIKKLCFVPRPAKFHSSVRFQNRMDR-QNAPLTLATLGFKSEL 326
            M +L+S RLLF  G+++ +KKL      A    SVRF +R+DR +NAPLTLA LGF +E 
Sbjct: 1    MPSLVSPRLLFLVGETIHLKKLSRGSSSALCQRSVRFFSRVDRDKNAPLTLANLGFNTEF 60

Query: 327  EKEKSNKTNKI--IPMSSAKYVPKIEKKPMRSSAVKAVGVKVPVEIEAAPFAAKTFSELG 500
            E    NK NK+  + ++     PK  +K   S+  + V VK  +EIE+APFAAK+FSELG
Sbjct: 61   ETTTKNKRNKLENVKVNYPIEAPKSREKVATSNKSRVVRVKKTLEIESAPFAAKSFSELG 120

Query: 501  LPPLLIEQLDKVGLTTPTDVQSTAIPTISENRDVIIQSYTGSGKTLAYLLPILAAVGPLK 680
            LPP LIE+L++ G   PTDVQS AIPTI +N D +IQSYTGSGKTLAY+LPIL+ VGPLK
Sbjct: 121  LPPPLIERLEREGFNVPTDVQSAAIPTILKNHDAVIQSYTGSGKTLAYVLPILSEVGPLK 180

Query: 681  --LSSDTEDPDKKKGIEAVIVAPSRELGMQIVREAEKLLGPAHKKAVQQLVGGANRSRQE 854
               SS  ++  KK  IEAV+VAPSREL MQIVRE EKLLGP +K+ VQQLVGGANRSRQE
Sbjct: 181  NNYSSADKETGKKTEIEAVVVAPSRELAMQIVREVEKLLGPENKRVVQQLVGGANRSRQE 240

Query: 855  EALKKNKPSIVVGTPGRVAEISAAGKLQTHGCRFLVLDEVDELLSFNFREDIHRILEHVG 1034
            EALKKNKP IVVGTPGR+AEISAAGKL THGCRFLVLDEVDELLSFNFR+DIHRILEHVG
Sbjct: 241  EALKKNKPLIVVGTPGRIAEISAAGKLHTHGCRFLVLDEVDELLSFNFRQDIHRILEHVG 300

Query: 1035 KRAGVEQPSKALAPLARRVERQTILVSATVPFSVIRAAKSWGRDPLLVRAKSVLPLESIP 1214
            +R+G + P      L R  +R+TI+VSATVPFSV+RAA+SW  DPLLV+AKSV+PLES+ 
Sbjct: 301  RRSGAD-PQGQKNSLVRWADRRTIMVSATVPFSVVRAARSWACDPLLVQAKSVIPLESLA 359

Query: 1215 PSG-SASVPGLTSSSTSNVTTQGTAESLPPVLKHYYCVTRAQHKIDTLRKCVHALDAKYV 1391
            P   + S P  +S+S SN+  Q T +SLPP LKHYYCVTR QHK+DTLR+CVHAL+A+ V
Sbjct: 360  PGTVNLSSPTSSSNSDSNLQHQATVQSLPPALKHYYCVTRLQHKVDTLRRCVHALNAQSV 419

Query: 1392 IAFMNHTRRLKDVVFKLEARGIKAAELHGDIGKLARSTVLKKFKGGEVRVLVTNELSARG 1571
            IAFMNHTR+LKD VFKLEARG+KAAELHGD+GKL RST+LKKFK GEVRVLVTNEL+ARG
Sbjct: 420  IAFMNHTRQLKDAVFKLEARGMKAAELHGDLGKLGRSTILKKFKSGEVRVLVTNELAARG 479

Query: 1572 LDVAECDLVVNLDLPTDSIHYXXXXXXXXXXXXXXSVVTICEESEVFVVNKMQRQLGVPI 1751
            LDV ECDLVVNLDLPTDSIHY              +VVTICEE EVFVV K+Q+QLGVPI
Sbjct: 480  LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEEREVFVVKKLQKQLGVPI 539

Query: 1752 QNCDFTEGNLVVSTEEKE 1805
              CDFTEG L+V+ +E++
Sbjct: 540  PACDFTEGKLIVTDKEEK 557


>ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549643|gb|EEF51131.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 595

 Score =  688 bits (1776), Expect = 0.0
 Identities = 373/560 (66%), Positives = 434/560 (77%), Gaps = 7/560 (1%)
 Frame = +3

Query: 150  MLTLISARLLFSCGDSLPIKKLCFVPRPAKFHSSVRFQNRMDRQNAPLTLATLGFKSELE 329
            M  L+S RLLF  G S P+ KL  V R    H +V F +++ +  APLTL +LG KS+ E
Sbjct: 32   MPALVSTRLLFLFGLSSPLPKLLRVSRTGWCHRNVLFYSQVRQDQAPLTLESLGIKSQFE 91

Query: 330  -KEKSNKTNKI--IPMSSAKYVPKIEKKPMRSSAVKAVGVKVPVEIEAAPFAAKTFSELG 500
             KEK  KTNK      +SA  VP+ + K + +   + V V   +E E A FAAK+FSELG
Sbjct: 92   RKEKITKTNKHEKFKQNSAIDVPRSKVKVV-NKGTRDVSVNKSLEDETALFAAKSFSELG 150

Query: 501  LPPLLIEQLDKVGLTTPTDVQSTAIPTISENRDVIIQSYTGSGKTLAYLLPILAAVGPL- 677
            LPPLL+E+L+  G   PT+VQS AIPTI +N DV+IQSYTGSGKTLAYLLPIL+ VGPL 
Sbjct: 151  LPPLLLERLESEGFKVPTEVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLI 210

Query: 678  -KLSSDTEDPDKKKGIEAVIVAPSRELGMQIVREAEKLLGPAHKKAVQQLVGGANRSRQE 854
             K S   E+  KK  IEAVIVAPSREL MQIVRE EKLLGPA+KKAVQQLVGGANRSRQE
Sbjct: 211  DKSSKGNEEVGKKSEIEAVIVAPSRELAMQIVREVEKLLGPANKKAVQQLVGGANRSRQE 270

Query: 855  EALKKNKPSIVVGTPGRVAEISAAGKLQTHGCRFLVLDEVDELLSFNFREDIHRILEHVG 1034
            EAL+KNKP+I+VGTPGR++EISAAGKL THGCR+LVLDEVDELLSFNFRED+HRIL+HVG
Sbjct: 271  EALRKNKPAIIVGTPGRISEISAAGKLHTHGCRYLVLDEVDELLSFNFREDVHRILDHVG 330

Query: 1035 KRAGVEQPSKALAPLARRVERQTILVSATVPFSVIRAAKSWGRDPLLVRAKSVLPLESIP 1214
            +R+  +      + LARR  RQTILVSATVPFSVIRAA+SWG DPLLV+AK+V+PLES+P
Sbjct: 331  RRSNADSHGPN-SQLARRAARQTILVSATVPFSVIRAARSWGHDPLLVQAKTVIPLESVP 389

Query: 1215 PSG--SASVPGLTSSSTSNVTTQGTAESLPPVLKHYYCVTRAQHKIDTLRKCVHALDAKY 1388
             S   +AS P  +SSS SN   Q   +SLPP LKHYYCVTR QHK+DTLR+CVHALDAK 
Sbjct: 390  ASRPVNASGPISSSSSNSNPQPQAAIQSLPPALKHYYCVTRIQHKVDTLRRCVHALDAKS 449

Query: 1389 VIAFMNHTRRLKDVVFKLEARGIKAAELHGDIGKLARSTVLKKFKGGEVRVLVTNELSAR 1568
            VIAFMN TR+LKD VFKLEARG+KAAELHGD+GKL+RST+LKKFK GEVRVLVTNELSAR
Sbjct: 450  VIAFMNQTRQLKDAVFKLEARGMKAAELHGDLGKLSRSTILKKFKNGEVRVLVTNELSAR 509

Query: 1569 GLDVAECDLVVNLDLPTDSIHYXXXXXXXXXXXXXXSVVTICEESEVFVVNKMQRQLGVP 1748
            GLDV ECDLVVNLDLPTDSIHY              +VVTICEESEVFVV KMQ+QLG+ 
Sbjct: 510  GLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKMQKQLGIT 569

Query: 1749 IQNCDFTEGNLVVSTEEKEK 1808
            I  C+FTEG L ++ EE++K
Sbjct: 570  IPTCEFTEGKLSMTVEEEKK 589


>ref|XP_004147988.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like
            [Cucumis sativus] gi|449519613|ref|XP_004166829.1|
            PREDICTED: DEAD-box ATP-dependent RNA helicase 47,
            mitochondrial-like [Cucumis sativus]
          Length = 555

 Score =  681 bits (1756), Expect = 0.0
 Identities = 349/555 (62%), Positives = 424/555 (76%), Gaps = 4/555 (0%)
 Frame = +3

Query: 150  MLTLISARLLFSCGDSLPIKKLCFVPRPAKFHSSVRFQNRMDRQNAPLTLATLGFKSELE 329
            M  L+  RL    G+S P  KL  V R   FHS V   N+ +  + PLTLA+LGFKSE +
Sbjct: 1    MNALVPGRLFLFAGESFPFHKLPQVCRSTFFHSGVFCLNKAEVNHGPLTLASLGFKSEFQ 60

Query: 330  KEKSNKTNKIIPMSSAKYVPKIEKKPMRSSAVKAVGVKVPVEIEAAPFAAKTFSELGLPP 509
            +   ++ NK+  + + + + K + K +R++  K  G +  VEI+ APFAAK+FSELGL  
Sbjct: 61   ETDKSQVNKVAELDTPRDISKSKVKIVRNNEKKVGGARSSVEIQMAPFAAKSFSELGLAD 120

Query: 510  LLIEQLDKVGLTTPTDVQSTAIPTISENRDVIIQSYTGSGKTLAYLLPILAAVGPLK--L 683
             LIE+L+  G T PTD+QS +IPTI +  DV+IQSYTGSGKTLAY+LPIL+ +GP K  +
Sbjct: 121  ALIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNTI 180

Query: 684  SSDTEDPDKKKGIEAVIVAPSRELGMQIVREAEKLLGPAHKKAVQQLVGGANRSRQEEAL 863
            S+  ++P KKK IEAVIVAPSRELGMQIVRE EK+LGPA++K VQQLVGGANRSRQEEAL
Sbjct: 181  SNYNDEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240

Query: 864  KKNKPSIVVGTPGRVAEISAAGKLQTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRA 1043
            KKNKPSIVVGTPGR+AEISA GKL THGC FL+LDEVDELLSFNFRED+HRILEHVG+R+
Sbjct: 241  KKNKPSIVVGTPGRIAEISATGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRS 300

Query: 1044 GVEQPSKALAPLARRVERQTILVSATVPFSVIRAAKSWGRDPLLVRAKSVLPLESIPPSG 1223
            G           ARR ERQ ++VSATVPFSV+RAAKSWG DPLLV+A  V PLES+PPSG
Sbjct: 301  GANSRGSENTQ-ARRAERQLVMVSATVPFSVVRAAKSWGFDPLLVKANKVAPLESVPPSG 359

Query: 1224 SASVPGLTSSSTSNVTTQGTA--ESLPPVLKHYYCVTRAQHKIDTLRKCVHALDAKYVIA 1397
              ++   +S STS+ T Q     ++LPP LKHYYC +R QHK+D LR+C+HALDAK+V+ 
Sbjct: 360  PVNLRAPSSGSTSDSTLQSQTAIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMV 419

Query: 1398 FMNHTRRLKDVVFKLEARGIKAAELHGDIGKLARSTVLKKFKGGEVRVLVTNELSARGLD 1577
            FMNHT++L+DVVFKL+ARG+ AAELHGD+GKLARST LK FK GE+RVLVTNELSARGLD
Sbjct: 420  FMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLD 479

Query: 1578 VAECDLVVNLDLPTDSIHYXXXXXXXXXXXXXXSVVTICEESEVFVVNKMQRQLGVPIQN 1757
            +AECDLVVNLDLPTDSIHY              +V++ICEE EVFVV K+Q+QLGVPI  
Sbjct: 480  IAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVLSICEEPEVFVVKKLQKQLGVPILA 539

Query: 1758 CDFTEGNLVVSTEEK 1802
            CDF EG LV++ EEK
Sbjct: 540  CDFNEGKLVLNEEEK 554


>ref|NP_001047522.1| Os02g0636300 [Oryza sativa Japonica Group]
            gi|75323584|sp|Q6H874.1|RH47A_ORYSJ RecName:
            Full=DEAD-box ATP-dependent RNA helicase 47A
            gi|49387967|dbj|BAD25075.1| DEAD/DEAH box helicase-like
            [Oryza sativa Japonica Group]
            gi|113537053|dbj|BAF09436.1| Os02g0636300 [Oryza sativa
            Japonica Group] gi|215713571|dbj|BAG94708.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222623309|gb|EEE57441.1| hypothetical protein
            OsJ_07650 [Oryza sativa Japonica Group]
          Length = 573

 Score =  666 bits (1719), Expect = 0.0
 Identities = 351/564 (62%), Positives = 432/564 (76%), Gaps = 11/564 (1%)
 Frame = +3

Query: 141  HRNMLTLISARLLFSCGDSLPIKKLCFVPRPAKFHSSVRFQ-NRMDRQNAPLTLATLGFK 317
            HR++L L S+R  F  GD LP + L  +PR  +FH +       ++ ++ PLTLA+L  +
Sbjct: 9    HRHVLALASSRSCFVLGDHLPFRMLS-LPRVVRFHQTAWHDIQTVEDKSGPLTLASLEVQ 67

Query: 318  SELE---KEKSNKTNKIIPMSSAKYV---PKIEK---KPMRSSAVKAVGVKVPVEIEAAP 470
            +++E   KE++ +T  I P S A  +   PK+     KP++S+  K+  +K  ++I+ + 
Sbjct: 68   NKVEYVKKERATRTGGIKPSSRASALNMKPKVSSFNAKPVKSALPKSAVLKKTLKIDESL 127

Query: 471  FAAKTFSELGLPPLLIEQLDKVGLTTPTDVQSTAIPTISENRDVIIQSYTGSGKTLAYLL 650
            F+AK+F ELGLPPLLI++L+K GLT PT+VQS AIP IS+  D +IQSYTGSGKTLAYLL
Sbjct: 128  FSAKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLL 187

Query: 651  PILAAVGPLKLSSDTEDPDKKKGIEAVIVAPSRELGMQIVREAEKLLGPAHKKAVQQLVG 830
            PIL+ +GPLK  ++ +  DK+ G+EAVIVAPSRELGMQIVRE EK+LGP  K+ VQQLVG
Sbjct: 188  PILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVG 247

Query: 831  GANRSRQEEALKKNKPSIVVGTPGRVAEISAAGKLQTHGCRFLVLDEVDELLSFNFREDI 1010
            GANRSRQEEALKKNKP IVVGTPGR++EISAAGKL TH CRFLVLDEVD+LLSFN+RED+
Sbjct: 248  GANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDM 307

Query: 1011 HRILEHVGKRAGVEQPSKALAPLARRVERQTILVSATVPFSVIRAAKSWGRDPLLVRAKS 1190
            HRILEHVG+++G       L PLARR ERQTILVSAT+PFSVIRAA+SWG DP+LVRA S
Sbjct: 308  HRILEHVGRKSGTSS-RDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMS 366

Query: 1191 VLPLESIP-PSGSASVPGLTSSSTSNVTTQGTAESLPPVLKHYYCVTRAQHKIDTLRKCV 1367
            V+PLESI  P    S P   S+S SN   Q   +SLPP L+HYYC ++AQHK+DTLR+C+
Sbjct: 367  VVPLESITVPRPVLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCI 426

Query: 1368 HALDAKYVIAFMNHTRRLKDVVFKLEARGIKAAELHGDIGKLARSTVLKKFKGGEVRVLV 1547
            HAL+A+ VIAFMN+T+ LKDVVFKLEARG+KA ELHGD+GKLARSTVLKKFK GE RVLV
Sbjct: 427  HALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLV 486

Query: 1548 TNELSARGLDVAECDLVVNLDLPTDSIHYXXXXXXXXXXXXXXSVVTICEESEVFVVNKM 1727
            TNELSARGLDV ECDLV+NLDLPTDS HY              +VVTICEE+E FVV KM
Sbjct: 487  TNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKM 546

Query: 1728 QRQLGVPIQNCDFTEGNLVVSTEE 1799
            ++QL VPI+ C+FTEG L+V  EE
Sbjct: 547  RKQLAVPIKPCEFTEGKLLVHKEE 570