BLASTX nr result

ID: Cimicifuga21_contig00008079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008079
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250...   414   e-113
ref|XP_002518104.1| transcription factor, putative [Ricinus comm...   412   e-112
gb|ABK94861.1| unknown [Populus trichocarpa]                          408   e-111
emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa] ...   397   e-108
ref|XP_002300173.1| predicted protein [Populus trichocarpa] gi|2...   395   e-107

>ref|XP_002268698.2| PREDICTED: uncharacterized protein LOC100250267 [Vitis vinifera]
          Length = 307

 Score =  414 bits (1065), Expect = e-113
 Identities = 222/308 (72%), Positives = 248/308 (80%), Gaps = 14/308 (4%)
 Frame = -2

Query: 1322 MYSSIH--PLD---CHDDLQGSLD-------ACVVLTSDPKPRLRWTAELHERFVDAVTQ 1179
            MYS+IH  PLD    H D QGSLD       AC+VLT+DPKPRLRWTAELHERFVDAVTQ
Sbjct: 1    MYSAIHSLPLDGGVAHADFQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQ 60

Query: 1178 LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKEFVDSSKDASCIAESQGTD 999
            LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKE  D+ K+ASCIAESQ T 
Sbjct: 61   LGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKELTDNCKEASCIAESQDT- 119

Query: 998  XXXXXXXSRMMAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLHLRIEAQGKYLQSIL 819
                   SRM+ QDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHL LRIEAQGKYLQSIL
Sbjct: 120  GSSSTSSSRMIPQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSIL 179

Query: 818  EKACKALNEQPVASVGLEEARQELSELAIKVTNDCLGALPLE--KLPTLAEIAAGCLDEK 645
            EKACKAL +Q  A+ GLE AR+ELSEL IKV+NDC G  PLE  K+P L+EIAA  L+ K
Sbjct: 180  EKACKALKDQAAATAGLEAAREELSELQIKVSNDCEGMNPLETIKMPCLSEIAA-ALENK 238

Query: 644  FLSSVQARIGDCSVDSCLTSTGSPLSPMGVGLQSTTIKKRPRPVFASGESLAWDSDMRQD 465
               +V ARIGDCSVDSCLTS+GSP+SPMG   +   +KKR RP+F  G SLA +++MRQD
Sbjct: 239  NAVNVPARIGDCSVDSCLTSSGSPISPMGASSRGAVMKKRSRPLFTGGSSLALENNMRQD 298

Query: 464  IEWIPTSI 441
            +EW+ T++
Sbjct: 299  VEWMMTNM 306


>ref|XP_002518104.1| transcription factor, putative [Ricinus communis]
            gi|223542700|gb|EEF44237.1| transcription factor,
            putative [Ricinus communis]
          Length = 303

 Score =  412 bits (1060), Expect = e-112
 Identities = 218/305 (71%), Positives = 252/305 (82%), Gaps = 11/305 (3%)
 Frame = -2

Query: 1322 MYSSIH--PLDCHDDLQGSLD-------ACVVLTSDPKPRLRWTAELHERFVDAVTQLGG 1170
            MYS+IH  PLD H D QGSLD       AC+VLT+DPKPRLRWTAELHERFVDAVTQLGG
Sbjct: 1    MYSAIHSLPLDGHGDFQGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQLGG 60

Query: 1169 PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKEFVDSSKDASCIAESQGTDXXX 990
            PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLG+QSCKE  ++SKDAS +AESQ T    
Sbjct: 61   PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGRQSCKESNENSKDAS-VAESQDT-GSS 118

Query: 989  XXXXSRMMAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLHLRIEAQGKYLQSILEKA 810
                SRM+AQD+NDGYQVTEALRVQMEVQRRLHEQLEVQR L LRIEAQGKYLQSILEKA
Sbjct: 119  TSTSSRMIAQDVNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKA 178

Query: 809  CKALNEQPVASVGLEEARQELSELAIKVTNDCLGALPLE--KLPTLAEIAAGCLDEKFLS 636
            CKALN+Q   S GLE AR+ELSELAIKV+N+C G +P +  K+P+L+E+A   L+ K  S
Sbjct: 179  CKALNDQAAVSAGLEAAREELSELAIKVSNECQGIVPADNMKMPSLSELAV-ALESKSTS 237

Query: 635  SVQARIGDCSVDSCLTSTGSPLSPMGVGLQSTTIKKRPRPVFASGESLAWDSDMRQDIEW 456
            ++ ARIGDCSV+SCLTSTGSP+SPMGVG  + +IKKRPRP+F +G+SL  +  MRQ++EW
Sbjct: 238  NLPARIGDCSVESCLTSTGSPVSPMGVGSHTASIKKRPRPIFGNGDSLPLEGSMRQEVEW 297

Query: 455  IPTSI 441
            +  +I
Sbjct: 298  MMGNI 302


>gb|ABK94861.1| unknown [Populus trichocarpa]
          Length = 309

 Score =  408 bits (1049), Expect = e-111
 Identities = 218/308 (70%), Positives = 248/308 (80%), Gaps = 14/308 (4%)
 Frame = -2

Query: 1322 MYSSIH--PLDCHDDLQGSLD-------ACVVLTSDPKPRLRWTAELHERFVDAVTQLGG 1170
            MYS+IH  PLD H D Q SLD       AC+VLT+DPKPRLRWTAELHERFVDAVTQLGG
Sbjct: 1    MYSAIHSLPLDGHGDFQASLDGINLPGDACLVLTTDPKPRLRWTAELHERFVDAVTQLGG 60

Query: 1169 PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKEFVDSSKD---ASCIAESQGTD 999
            PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKE  D+SKD   A  +AESQ T 
Sbjct: 61   PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDVGIAPSVAESQDTG 120

Query: 998  XXXXXXXSRMMAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLHLRIEAQGKYLQSIL 819
                    RM+AQDLNDGYQVTEALRVQMEVQRRLHEQLEVQ HL LRIEAQGKYLQSIL
Sbjct: 121  SSTSASS-RMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQHHLQLRIEAQGKYLQSIL 179

Query: 818  EKACKALNEQPVASVGLEEARQELSELAIKVTNDCLGALPLE--KLPTLAEIAAGCLDEK 645
            EKACKALN+Q VA+ GLE AR+ELSELAIKV+N+C G  PL+  K+P+L+E+AA  L  +
Sbjct: 180  EKACKALNDQAVATAGLEAAREELSELAIKVSNECAGIAPLDTMKMPSLSELAA-ALGNR 238

Query: 644  FLSSVQARIGDCSVDSCLTSTGSPLSPMGVGLQSTTIKKRPRPVFASGESLAWDSDMRQD 465
              S+V ARIGDCSV+SCLTST SP+SPMGVG Q  + KKR RPV  +G+SL ++ + RQ+
Sbjct: 239  NASNVPARIGDCSVESCLTSTSSPVSPMGVGSQVASTKKRSRPVLGNGDSLPFEGNFRQE 298

Query: 464  IEWIPTSI 441
            +EW  ++I
Sbjct: 299  VEWTMSNI 306


>emb|CCA29095.1| putative MYB transcription factor [Rosa rugosa]
            gi|327412625|emb|CCA29101.1| putative MYB transcription
            factor [Rosa rugosa]
          Length = 307

 Score =  397 bits (1019), Expect = e-108
 Identities = 214/310 (69%), Positives = 251/310 (80%), Gaps = 15/310 (4%)
 Frame = -2

Query: 1322 MYSSIH--PLD---C-HDDLQGSLD-------ACVVLTSDPKPRLRWTAELHERFVDAVT 1182
            MYS++H  PLD   C H +  GSLD       AC+VLT+DPKPRLRWTAELHERFVDAVT
Sbjct: 1    MYSALHSLPLDGGVCGHGEFSGSLDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVT 60

Query: 1181 QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKEFVDSSKDASCIAESQGT 1002
            QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQS KE  ++SKDASCIAESQ  
Sbjct: 61   QLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQ-- 118

Query: 1001 DXXXXXXXSRMMAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLHLRIEAQGKYLQSI 822
            D       SR++AQDLNDGYQVTEALRVQMEVQRRLHEQLEVQR L LRIEAQGKYLQSI
Sbjct: 119  DTGSSATSSRVIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSI 178

Query: 821  LEKACKALNEQPVASVGLEEARQELSELAIKVTNDCLGALPLE--KLPTLAEIAAGCLDE 648
            LEKACKALN+Q   + GLE A++ELSELAIKV++DC G  PL+  K+ +L+EIAA  ++ 
Sbjct: 179  LEKACKALNDQAATAAGLEAAKEELSELAIKVSSDCQGMAPLDTIKMQSLSEIAA-AIEN 237

Query: 647  KFLSSVQARIGDCSVDSCLTSTGSPLSPMGVGLQSTTIKKRPRPVFASGESLAWDSDMRQ 468
            K  S+V ARIG+CSVDSCLTSTGSP SPMG+   +  +KKR RP F++G+SL  + +MRQ
Sbjct: 238  KSASNVLARIGNCSVDSCLTSTGSPGSPMGMSSLAAAMKKRQRPFFSNGDSLPLEGNMRQ 297

Query: 467  DIEWIPTSIS 438
            ++EW+ ++I+
Sbjct: 298  EVEWMMSNIA 307


>ref|XP_002300173.1| predicted protein [Populus trichocarpa] gi|222847431|gb|EEE84978.1|
            predicted protein [Populus trichocarpa]
          Length = 285

 Score =  395 bits (1015), Expect = e-107
 Identities = 213/288 (73%), Positives = 239/288 (82%), Gaps = 11/288 (3%)
 Frame = -2

Query: 1322 MYSSIH--PLDCHDDLQGSLD-------ACVVLTSDPKPRLRWTAELHERFVDAVTQLGG 1170
            MYS+IH  PLD H D Q +LD       AC+VLT+DPKPRLRWTAELHERFVDAV QLGG
Sbjct: 1    MYSAIHSLPLDGHGDFQAALDGTNLPGDACLVLTTDPKPRLRWTAELHERFVDAVAQLGG 60

Query: 1169 PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKEFVDSSKDASCIAESQGTDXXX 990
            PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKE  D+SKDAS +AESQ T    
Sbjct: 61   PDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSCKESTDNSKDAS-VAESQDT-GSS 118

Query: 989  XXXXSRMMAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRHLHLRIEAQGKYLQSILEKA 810
                SRM+AQDLNDGYQVTEALRVQMEVQRRLHEQLEVQR L LRIEAQGKYLQSILEKA
Sbjct: 119  TSASSRMIAQDLNDGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKA 178

Query: 809  CKALNEQPVASVGLEEARQELSELAIKVTNDCLGALPLE--KLPTLAEIAAGCLDEKFLS 636
            CKALN+Q VA+ GLE AR+ELSELAIKV+N+  G  PL+  K+P+++E+AA  L+ K  S
Sbjct: 179  CKALNDQAVATAGLEAAREELSELAIKVSNERAGIAPLDTMKMPSISELAA-ALENKHAS 237

Query: 635  SVQARIGDCSVDSCLTSTGSPLSPMGVGLQSTTIKKRPRPVFASGESL 492
            +V AR+GDCSV+SCLTSTGSP+SPMGVG Q  + KKR RPVF +G+SL
Sbjct: 238  NVPARVGDCSVESCLTSTGSPVSPMGVGAQVASTKKRSRPVFGNGDSL 285


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