BLASTX nr result

ID: Cimicifuga21_contig00008076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008076
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39513.3| unnamed protein product [Vitis vinifera]              198   1e-48
tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea m...   196   7e-48
ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-l...   196   7e-48
dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgar...   196   7e-48
emb|CBI36838.3| unnamed protein product [Vitis vinifera]              196   7e-48

>emb|CBI39513.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  198 bits (504), Expect = 1e-48
 Identities = 97/118 (82%), Positives = 99/118 (83%)
 Frame = +1

Query: 100 EEKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP 279
           E+KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP
Sbjct: 11  EKKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP 70

Query: 280 ECYIRGNTIKYLRVPDEVIDKVQEETNKSRTDRKPPXXXXXXXXXXXXXXXXXPAKGI 453
           ECYIRGNTIKYLRVPDEVIDKVQEET K+R DRKPP                 PAKGI
Sbjct: 71  ECYIRGNTIKYLRVPDEVIDKVQEET-KNRADRKPPGVGRGRGRGREEGAGGRPAKGI 127


>tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
          Length = 172

 Score =  196 bits (498), Expect = 7e-48
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = +1

Query: 109 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 288
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 289 IRGNTIKYLRVPDEVIDKVQEETNKSRTDRKPP 387
           IRGNTIKYLRVPDEVIDKVQEET+KSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93


>ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Brachypodium distachyon] gi|326528247|dbj|BAJ93305.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 142

 Score =  196 bits (498), Expect = 7e-48
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = +1

Query: 109 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 288
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 289 IRGNTIKYLRVPDEVIDKVQEETNKSRTDRKPP 387
           IRGNTIKYLRVPDEVIDKVQEET+KSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93


>dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 143

 Score =  196 bits (498), Expect = 7e-48
 Identities = 90/93 (96%), Positives = 93/93 (100%)
 Frame = +1

Query: 109 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 288
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 289 IRGNTIKYLRVPDEVIDKVQEETNKSRTDRKPP 387
           IRGNTIKYLRVPDEVIDKVQEET+KSR+DRKPP
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPP 93


>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  196 bits (498), Expect = 7e-48
 Identities = 96/116 (82%), Positives = 97/116 (83%)
 Frame = +1

Query: 106 KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 285
           KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC
Sbjct: 46  KMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEC 105

Query: 286 YIRGNTIKYLRVPDEVIDKVQEETNKSRTDRKPPXXXXXXXXXXXXXXXXXPAKGI 453
           YIRGNTIKYLRVPDEVIDKVQEET K+R DRKPP                 PAKGI
Sbjct: 106 YIRGNTIKYLRVPDEVIDKVQEET-KNRADRKPPGVGRGRGRGREDGSSGRPAKGI 160


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