BLASTX nr result

ID: Cimicifuga21_contig00008058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008058
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22851.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002280085.1| PREDICTED: transmembrane protein 93-like [Vi...   102   3e-20
ref|XP_002311375.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|NP_001236896.1| uncharacterized protein LOC100526986 [Glycin...    99   5e-19
ref|XP_004135605.1| PREDICTED: ER membrane protein complex subun...    97   1e-18

>emb|CBI22851.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -2

Query: 238 NQSGIMTAEMEKKSVDDMLPTMNAESLQANMRTIFYSRTFLSIIAGVIAGILGFTNLTGF 59
           N SG   +E +     + +PT NAE+LQ+NM+ I+YSRTFLSII GVIAGILGFT  TGF
Sbjct: 359 NDSG--ASEKKSNEATNDMPTFNAENLQSNMKIIYYSRTFLSIIGGVIAGILGFTGFTGF 416

Query: 58  VFYFLVMALTSLGLVAKAK 2
           +FYFLVMA+TS+GL+AKAK
Sbjct: 417 IFYFLVMAITSVGLMAKAK 435


>ref|XP_002280085.1| PREDICTED: transmembrane protein 93-like [Vitis vinifera]
          Length = 120

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -2

Query: 238 NQSGIMTAEMEKKSVDDMLPTMNAESLQANMRTIFYSRTFLSIIAGVIAGILGFTNLTGF 59
           N SG   +E +     + +PT NAE+LQ+NM+ I+YSRTFLSII GVIAGILGFT  TGF
Sbjct: 5   NDSG--ASEKKSNEATNDMPTFNAENLQSNMKIIYYSRTFLSIIGGVIAGILGFTGFTGF 62

Query: 58  VFYFLVMALTSLGLVAKAK 2
           +FYFLVMA+TS+GL+AKAK
Sbjct: 63  IFYFLVMAITSVGLMAKAK 81


>ref|XP_002311375.1| predicted protein [Populus trichocarpa] gi|222851195|gb|EEE88742.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/73 (72%), Positives = 61/73 (83%), Gaps = 2/73 (2%)
 Frame = -2

Query: 214 EMEKKSVD--DMLPTMNAESLQANMRTIFYSRTFLSIIAGVIAGILGFTNLTGFVFYFLV 41
           E EKKS D  D L T  AE+LQ+NM+ I+YSRTFLSII GV+AGILGFT LTGFVFYFLV
Sbjct: 6   ESEKKSSDALDDLQTFRAENLQSNMKVIYYSRTFLSIIGGVVAGILGFTGLTGFVFYFLV 65

Query: 40  MALTSLGLVAKAK 2
           MA+TS+ L+AKAK
Sbjct: 66  MAITSVALIAKAK 78


>ref|NP_001236896.1| uncharacterized protein LOC100526986 [Glycine max]
           gi|255631310|gb|ACU16022.1| unknown [Glycine max]
          Length = 120

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/75 (69%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = -2

Query: 220 TAEMEKKSVDDM--LPTMNAESLQANMRTIFYSRTFLSIIAGVIAGILGFTNLTGFVFYF 47
           +A  EKKS + +  L T NAE++Q+NM+ I+YSRTFLSII GV+AGILGFT L GFVFY 
Sbjct: 7   SASSEKKSSNGVNELLTFNAENMQSNMKIIYYSRTFLSIIGGVVAGILGFTGLKGFVFYL 66

Query: 46  LVMALTSLGLVAKAK 2
           L+MALTSLGLVAKAK
Sbjct: 67  LLMALTSLGLVAKAK 81


>ref|XP_004135605.1| PREDICTED: ER membrane protein complex subunit 6-like [Cucumis
           sativus]
          Length = 119

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = -2

Query: 232 SGIMTAEMEKKSVD--DMLPTMNAESLQANMRTIFYSRTFLSIIAGVIAGILGFTNLTGF 59
           +G  +   +KKS D  D +P  NAE+LQ N++ I+YSRTFLSII GVIAG+LGFT LTGF
Sbjct: 2   AGYSSTASDKKSSDLADDIPIFNAENLQNNLKIIYYSRTFLSIIGGVIAGVLGFTGLTGF 61

Query: 58  VFYFLVMALTSLGLVAKA 5
           +FYFLVMA+TS+ L AKA
Sbjct: 62  IFYFLVMAITSVALAAKA 79


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