BLASTX nr result

ID: Cimicifuga21_contig00008056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008056
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chlorop...   234   2e-59
ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|1...   231   2e-58
ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chlorop...   230   3e-58
ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arab...   222   1e-55
emb|CBI17129.3| unnamed protein product [Vitis vinifera]              221   2e-55

>ref|XP_004147275.1| PREDICTED: 50S ribosomal protein L9, chloroplastic-like [Cucumis
           sativus]
          Length = 198

 Score =  234 bits (598), Expect = 2e-59
 Identities = 120/174 (68%), Positives = 137/174 (78%)
 Frame = +2

Query: 101 NINETSKISEKKTALLIVAQKKAQKTRKIILKEDIAQVGKKGELKDVKAGFYRNYLHPKG 280
           NI ET+K S  +TA+++VAQKKA K+RKIILKED+A +GKKG+L DVKAG+YRNYL P G
Sbjct: 25  NIEETAKFSYGRTAMVVVAQKKASKSRKIILKEDVADLGKKGQLIDVKAGYYRNYLFPMG 84

Query: 281 MAQIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLALVLETVGAFKVKRKGGKGKQIFGTV 460
            AQIVTP LL                     QQLAL+ +TVGAFKVKRKGGKGKQIFGTV
Sbjct: 85  KAQIVTPVLLKEMRIEEERIEAEKKRVIEEAQQLALIFQTVGAFKVKRKGGKGKQIFGTV 144

Query: 461 TPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLHPEVTAQVRLTVFAN 622
           T QDLVDIIKAQ+QRD+DKR V LPEIRETGEY+AELKLHPEVTA+VR+ VFAN
Sbjct: 145 TAQDLVDIIKAQLQRDIDKRIVDLPEIRETGEYVAELKLHPEVTARVRVNVFAN 198


>ref|XP_002331481.1| predicted protein [Populus trichocarpa] gi|118488503|gb|ABK96065.1|
           unknown [Populus trichocarpa]
           gi|222873559|gb|EEF10690.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  231 bits (589), Expect = 2e-58
 Identities = 120/172 (69%), Positives = 135/172 (78%)
 Frame = +2

Query: 107 NETSKISEKKTALLIVAQKKAQKTRKIILKEDIAQVGKKGELKDVKAGFYRNYLHPKGMA 286
           NE SK  +K+  +L++AQKKA+KTRKIILKED+  +GKKG+L DVKAGFYRN+L P G A
Sbjct: 27  NEISKFPDKRIPMLVLAQKKAKKTRKIILKEDVTDLGKKGQLVDVKAGFYRNFLLPTGKA 86

Query: 287 QIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLALVLETVGAFKVKRKGGKGKQIFGTVTP 466
           QIVTP L+                     QQLAL+ ETVGAFKVKRKGGKG+QIFGTVT 
Sbjct: 87  QIVTPGLVKEMRMEEERIEAEKKRVKEEAQQLALIFETVGAFKVKRKGGKGRQIFGTVTA 146

Query: 467 QDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLHPEVTAQVRLTVFAN 622
           QDLVDIIKAQIQRDVDKR VSLP+IRETGEYIAELKLHPEVTAQVRL V+AN
Sbjct: 147 QDLVDIIKAQIQRDVDKRIVSLPDIRETGEYIAELKLHPEVTAQVRLNVYAN 198


>ref|XP_002274311.1| PREDICTED: 50S ribosomal protein L9, chloroplastic [Vitis vinifera]
          Length = 195

 Score =  230 bits (587), Expect = 3e-58
 Identities = 117/174 (67%), Positives = 135/174 (77%)
 Frame = +2

Query: 101 NINETSKISEKKTALLIVAQKKAQKTRKIILKEDIAQVGKKGELKDVKAGFYRNYLHPKG 280
           N N+  K S+ +   ++VAQKKA+K RKIILKED+A++GKKG+L DVKAG+YRNYL P G
Sbjct: 22  NFNQPRKFSDNRMVFVVVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMG 81

Query: 281 MAQIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLALVLETVGAFKVKRKGGKGKQIFGTV 460
           MAQIVTP LL                     QQ+AL+ ETVGAFKVKRKGGKGKQIFG+V
Sbjct: 82  MAQIVTPLLLKEMRMEEERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSV 141

Query: 461 TPQDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLHPEVTAQVRLTVFAN 622
           T QDL DIIKAQ+QRDVDKR VSLPEIRETGEY+AELKLHPEVTA+VRL V+AN
Sbjct: 142 TAQDLTDIIKAQLQRDVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 195


>ref|XP_002875701.1| hypothetical protein ARALYDRAFT_484888 [Arabidopsis lyrata subsp.
           lyrata] gi|297321539|gb|EFH51960.1| hypothetical protein
           ARALYDRAFT_484888 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score =  222 bits (565), Expect = 1e-55
 Identities = 113/172 (65%), Positives = 134/172 (77%)
 Frame = +2

Query: 107 NETSKISEKKTALLIVAQKKAQKTRKIILKEDIAQVGKKGELKDVKAGFYRNYLHPKGMA 286
           NET K+SE++    +V+QKKA+K RK+ILKED+  +GK+G+L DVKAGF+RN+L P G A
Sbjct: 26  NETLKVSERRFKFEVVSQKKAKKLRKVILKEDVTDLGKQGQLLDVKAGFFRNFLLPTGKA 85

Query: 287 QIVTPTLLXXXXXXXXXXXXXXXXXXXXXQQLALVLETVGAFKVKRKGGKGKQIFGTVTP 466
           Q++TP LL                     QQLALV ETVGAFKVKRKGGKGKQIFG+VT 
Sbjct: 86  QLMTPLLLKELKMEDERIEAEKQRVKEEAQQLALVFETVGAFKVKRKGGKGKQIFGSVTA 145

Query: 467 QDLVDIIKAQIQRDVDKRFVSLPEIRETGEYIAELKLHPEVTAQVRLTVFAN 622
           QDLVDIIKAQ+QRD+DKR VSLPEIRETGEYIAELKLHP+VTA+VR+ VFAN
Sbjct: 146 QDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIAELKLHPDVTARVRINVFAN 197


>emb|CBI17129.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  221 bits (563), Expect = 2e-55
 Identities = 113/159 (71%), Positives = 128/159 (80%)
 Frame = +2

Query: 146 LIVAQKKAQKTRKIILKEDIAQVGKKGELKDVKAGFYRNYLHPKGMAQIVTPTLLXXXXX 325
           ++VAQKKA+K RKIILKED+A++GKKG+L DVKAG+YRNYL P GMAQIVTP LL     
Sbjct: 4   VVVAQKKAKKLRKIILKEDVAELGKKGQLLDVKAGYYRNYLQPMGMAQIVTPLLLKEMRM 63

Query: 326 XXXXXXXXXXXXXXXXQQLALVLETVGAFKVKRKGGKGKQIFGTVTPQDLVDIIKAQIQR 505
                           QQ+AL+ ETVGAFKVKRKGGKGKQIFG+VT QDL DIIKAQ+QR
Sbjct: 64  EEERIEAEKKRVKEEAQQMALMFETVGAFKVKRKGGKGKQIFGSVTAQDLTDIIKAQLQR 123

Query: 506 DVDKRFVSLPEIRETGEYIAELKLHPEVTAQVRLTVFAN 622
           DVDKR VSLPEIRETGEY+AELKLHPEVTA+VRL V+AN
Sbjct: 124 DVDKRIVSLPEIRETGEYVAELKLHPEVTARVRLNVYAN 162


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