BLASTX nr result

ID: Cimicifuga21_contig00008054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008054
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Rici...   267   2e-69
ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|2...   264   2e-68
ref|NP_001237678.1| uncharacterized protein LOC100306109 [Glycin...   263   3e-68
ref|XP_002263471.1| PREDICTED: NEP1-interacting protein 1 [Vitis...   263   4e-68
ref|XP_003517156.1| PREDICTED: LOW QUALITY PROTEIN: NEP1-interac...   261   1e-67

>ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
           gi|223529804|gb|EEF31739.1| RING-H2 finger protein
           ATL4M, putative [Ricinus communis]
          Length = 235

 Score =  267 bits (682), Expect = 2e-69
 Identities = 130/214 (60%), Positives = 164/214 (76%), Gaps = 3/214 (1%)
 Frame = -3

Query: 745 LERFKQL---TVRALLGNLISAILGFFFAVVGTLLGAITGAIVGQETGCGFFRGVAVGAI 575
           +E+ K++    V A++GN+ SAI  FFFA+VGTLLGA+TGA++GQET  GF RG AVGAI
Sbjct: 22  VEKIKEVCNFAVSAVIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAI 81

Query: 574 SGALLSIEVFETFRRLWLTDGKGIKCLLYLIDXXXXXXXXXXXXXXXGPMMLNAVQNEMA 395
           SGA+ SIEVFE+   LW +D  GI CLLYLID               GP ML+AVQ++M 
Sbjct: 82  SGAVFSIEVFESSLLLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMG 141

Query: 394 GIEGSFEEVLDIFETGGCKGLSGDMVEKIPKIEITTKNHVDSWGEKISCSVCLQDFQLGQ 215
            +E SFEEV +IF+TGG KGL+GD VEKIPKI+IT+ N +D+ GEK++CSVCLQDFQ+G+
Sbjct: 142 AVETSFEEVQNIFDTGGAKGLTGDTVEKIPKIKITSNNTIDASGEKVACSVCLQDFQVGE 201

Query: 214 NVRNLPYCHHMFHPTCIDQWLVKHGSCPLCRRDL 113
            VR+LP+CHHMFH  CID+WL++H SCPLCRRDL
Sbjct: 202 TVRSLPHCHHMFHLPCIDKWLLRHASCPLCRRDL 235


>ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|222836721|gb|EEE75114.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  264 bits (674), Expect = 2e-68
 Identities = 127/203 (62%), Positives = 156/203 (76%)
 Frame = -3

Query: 721 VRALLGNLISAILGFFFAVVGTLLGAITGAIVGQETGCGFFRGVAVGAISGALLSIEVFE 542
           V A++GN+ SAI  FFFA+VGTLLGA+TGA++GQET  GF RG AVGAISGA+ SIEVFE
Sbjct: 22  VSAIIGNIFSAIFTFFFALVGTLLGAMTGALIGQETESGFVRGAAVGAISGAVFSIEVFE 81

Query: 541 TFRRLWLTDGKGIKCLLYLIDXXXXXXXXXXXXXXXGPMMLNAVQNEMAGIEGSFEEVLD 362
           +   LW +D  GI C+LYLID               GP ML+AVQ++M  +E +FEE+ +
Sbjct: 82  SSLVLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNFEEIPN 141

Query: 361 IFETGGCKGLSGDMVEKIPKIEITTKNHVDSWGEKISCSVCLQDFQLGQNVRNLPYCHHM 182
           IF+TGG KGL GD +EKIPKI IT+ N+VD  GEK+SCSVCLQDFQLG+ VR+LP+CHHM
Sbjct: 142 IFDTGGSKGLPGDSLEKIPKIRITSNNNVDESGEKVSCSVCLQDFQLGETVRSLPHCHHM 201

Query: 181 FHPTCIDQWLVKHGSCPLCRRDL 113
           FH  CID+WL++H SCPLCRRDL
Sbjct: 202 FHLPCIDKWLLRHASCPLCRRDL 224


>ref|NP_001237678.1| uncharacterized protein LOC100306109 [Glycine max]
           gi|255627575|gb|ACU14132.1| unknown [Glycine max]
          Length = 242

 Score =  263 bits (673), Expect = 3e-68
 Identities = 130/215 (60%), Positives = 163/215 (75%), Gaps = 3/215 (1%)
 Frame = -3

Query: 754 VSGLERFKQL---TVRALLGNLISAILGFFFAVVGTLLGAITGAIVGQETGCGFFRGVAV 584
           V+ +ER KQL      A++GN+ SAIL F FA+VGTLLGA+TGA++GQET  GF RG AV
Sbjct: 16  VNFVERVKQLGTLAFSAVIGNIFSAILTFCFALVGTLLGALTGALIGQETESGFIRGAAV 75

Query: 583 GAISGALLSIEVFETFRRLWLTDGKGIKCLLYLIDXXXXXXXXXXXXXXXGPMMLNAVQN 404
           GAISGA+ SIEVFE+   LW +D  GI C+LYLID               GP ML+AVQ+
Sbjct: 76  GAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIASLLSGRLVRERIGPAMLSAVQS 135

Query: 403 EMAGIEGSFEEVLDIFETGGCKGLSGDMVEKIPKIEITTKNHVDSWGEKISCSVCLQDFQ 224
           +M  +E SF+EV +IF+TGG KGLSGD+VEKIPKI+ITT N+ D+ G+++SCSVCLQDF 
Sbjct: 136 QMGAVEASFDEVQNIFDTGGSKGLSGDLVEKIPKIKITTDNNFDASGDRVSCSVCLQDFM 195

Query: 223 LGQNVRNLPYCHHMFHPTCIDQWLVKHGSCPLCRR 119
           LG+ VR+LP+CHHMFH  CID+WL +HGSCPLCR+
Sbjct: 196 LGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRK 230


>ref|XP_002263471.1| PREDICTED: NEP1-interacting protein 1 [Vitis vinifera]
           gi|296084057|emb|CBI24445.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  263 bits (671), Expect = 4e-68
 Identities = 130/215 (60%), Positives = 159/215 (73%)
 Frame = -3

Query: 757 VVSGLERFKQLTVRALLGNLISAILGFFFAVVGTLLGAITGAIVGQETGCGFFRGVAVGA 578
           +V  +  F      A+LGN+ SAI  FFFA+VGT+LGA+TGA++GQET  GF RG AVGA
Sbjct: 21  LVGRVRDFFSFAFSAILGNVFSAIFTFFFALVGTMLGAMTGALIGQETESGFVRGAAVGA 80

Query: 577 ISGALLSIEVFETFRRLWLTDGKGIKCLLYLIDXXXXXXXXXXXXXXXGPMMLNAVQNEM 398
           ISGA+ SIEVFE+   LW +D  GI CLLYLID               GP ML+AVQ++M
Sbjct: 81  ISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIVSLLSGRLVRERIGPAMLSAVQSQM 140

Query: 397 AGIEGSFEEVLDIFETGGCKGLSGDMVEKIPKIEITTKNHVDSWGEKISCSVCLQDFQLG 218
             +E S++EV +IF+TGG KGL GD VEKIPKI IT+ N+ D+ GEK+SCSVCLQDFQLG
Sbjct: 141 GAVEVSYDEVPNIFDTGGAKGLPGDSVEKIPKITITSDNNGDASGEKVSCSVCLQDFQLG 200

Query: 217 QNVRNLPYCHHMFHPTCIDQWLVKHGSCPLCRRDL 113
           + VR+LP+CHHMFH  CID+WL+ HGSCPLCRRDL
Sbjct: 201 ETVRSLPHCHHMFHLPCIDKWLLGHGSCPLCRRDL 235


>ref|XP_003517156.1| PREDICTED: LOW QUALITY PROTEIN: NEP1-interacting protein 1-like
           [Glycine max]
          Length = 256

 Score =  261 bits (668), Expect = 1e-67
 Identities = 129/215 (60%), Positives = 163/215 (75%), Gaps = 3/215 (1%)
 Frame = -3

Query: 754 VSGLERFKQL---TVRALLGNLISAILGFFFAVVGTLLGAITGAIVGQETGCGFFRGVAV 584
           V+ +ER KQL    V A++GN+ SAIL F FA+VGTLLGA+TGA++GQET  GF RG AV
Sbjct: 16  VNLVERIKQLGTLAVSAVIGNIFSAILTFCFALVGTLLGALTGALIGQETESGFIRGAAV 75

Query: 583 GAISGALLSIEVFETFRRLWLTDGKGIKCLLYLIDXXXXXXXXXXXXXXXGPMMLNAVQN 404
           GAISGA+ SIEVFE+   LW +D  GI C+LYLID               GP M +AVQ+
Sbjct: 76  GAISGAVFSIEVFESSLVLWQSDESGIGCVLYLIDVIVSLLSGRLVRERIGPAMFSAVQS 135

Query: 403 EMAGIEGSFEEVLDIFETGGCKGLSGDMVEKIPKIEITTKNHVDSWGEKISCSVCLQDFQ 224
           +M  +E SF+EV +IF+TGG KGLSGD+V+KIPKI+ITT N+VD+ G+++SCSVCLQDF 
Sbjct: 136 QMGAVETSFDEVQNIFDTGGSKGLSGDLVDKIPKIKITTDNNVDASGDRVSCSVCLQDFM 195

Query: 223 LGQNVRNLPYCHHMFHPTCIDQWLVKHGSCPLCRR 119
           LG+ VR+LP+CHHMFH  CID+WL +HGSCPLC +
Sbjct: 196 LGETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCXK 230


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