BLASTX nr result

ID: Cimicifuga21_contig00008052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008052
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransf...    70   1e-10
ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|2235393...    67   2e-09
ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltra...    66   3e-09
emb|CAN61088.1| hypothetical protein VITISV_033584 [Vitis vinifera]    64   2e-08
ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08

>ref|XP_002273877.1| PREDICTED: tRNA (adenine-N(1)-)-methyltransferase catalytic subunit
           TRMT61A [Vitis vinifera]
          Length = 324

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/65 (60%), Positives = 44/65 (67%)
 Frame = -1

Query: 221 EGKTDFGGSVNGCPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHTGYLTFA 42
           EGK D      G  LGP P KRRQ S E  N  +   +ST VMARP+AEA+GHTG+LTFA
Sbjct: 247 EGKMDCSQGNEGGFLGPRPGKRRQRSGEASNEGEIP-TSTTVMARPAAEARGHTGFLTFA 305

Query: 41  RLKCL 27
           RLKCL
Sbjct: 306 RLKCL 310


>ref|XP_002521442.1| tRNA, putative [Ricinus communis] gi|223539341|gb|EEF40932.1| tRNA,
           putative [Ricinus communis]
          Length = 311

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/65 (55%), Positives = 42/65 (64%)
 Frame = -1

Query: 221 EGKTDFGGSVNGCPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHTGYLTFA 42
           E K D G    G  LG  P KRRQ S+E  N + N  SS  +MARP  +++GHTGYLTFA
Sbjct: 247 EVKMDCGQGEEGISLGSPPYKRRQRSSEGSNVQ-NSSSSPVIMARPCGDSRGHTGYLTFA 305

Query: 41  RLKCL 27
           RLKCL
Sbjct: 306 RLKCL 310


>ref|XP_004135565.1| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic
           subunit TRMT61A-like [Cucumis sativus]
           gi|449528672|ref|XP_004171327.1| PREDICTED: tRNA
           (adenine(58)-N(1))-methyltransferase catalytic subunit
           TRMT61A-like [Cucumis sativus]
          Length = 310

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/65 (55%), Positives = 45/65 (69%)
 Frame = -1

Query: 221 EGKTDFGGSVNGCPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHTGYLTFA 42
           EG+T+      G  +G  PCKRR  S E ++  DN+ SST VM RP +EA+GHTGYLTFA
Sbjct: 247 EGRTESNQVDGGGSVGLPPCKRRLRSKESDD-MDNE-SSTTVMVRPCSEARGHTGYLTFA 304

Query: 41  RLKCL 27
           RL+CL
Sbjct: 305 RLRCL 309


>emb|CAN61088.1| hypothetical protein VITISV_033584 [Vitis vinifera]
          Length = 777

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/62 (58%), Positives = 41/62 (66%)
 Frame = -1

Query: 221 EGKTDFGGSVNGCPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHTGYLTFA 42
           EGK D      G  LGP P KRRQ S E  N  +   +ST VMARP+AEA+GHTG+LTFA
Sbjct: 314 EGKMDCSQGNEGGFLGPRPGKRRQRSGEASNEGEIP-TSTTVMARPAAEARGHTGFLTFA 372

Query: 41  RL 36
           RL
Sbjct: 373 RL 374


>ref|XP_002324584.1| predicted protein [Populus trichocarpa] gi|222866018|gb|EEF03149.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = -1

Query: 221 EGKTDFGGSVNGCPLGPLPCKRRQLSNEIENGRDNKCSSTAVMARPSAEAKGHTGYLTFA 42
           EGK D      G  +G  P KRRQ S+E    +D+  S T + ARP A+A+GHTGYLTF+
Sbjct: 247 EGKMDSCQGDEGVSVGSPPYKRRQRSSEGSIVQDSSSSPT-IKARPCADARGHTGYLTFS 305

Query: 41  RLKCL 27
           RLKCL
Sbjct: 306 RLKCL 310


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