BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008037
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]   271   2e-70
ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...   270   5e-70
ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...   267   3e-69
ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|2...   263   4e-68
ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-a...   251   2e-64

>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score =  271 bits (693), Expect = 2e-70
 Identities = 138/229 (60%), Positives = 163/229 (71%)
 Frame = -2

Query: 902 MSSLKNAVSRRAHKERSQPQWRKKFGHLEKHKDYKVRAEAFHXXXXXXXXXXXXXLNRNP 723
           MSS +NA+SRRA+KER+QP  RKKFG LEKHKDY VRA+AFH               RNP
Sbjct: 1   MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 722 EEFYFGMIRTRTIDGVHRPESDAKQYTQEELMLMKTQDIGYIFXXXXXXXXXXXKLNSML 543
           +EFYF MI+TRT+DGVHRPES A +Y+ EELMLMKTQD+GY+            KL +ML
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 542 HSLDNQLPNKHIYYAEDRDEAKEIRLRSSQGRKLPLSEDVPESIKRKTNASYRELEARKK 363
           HSLDNQ  N+H+YYAEDR+EA+EI+ +SS+G  LP  +DVP  IKRKT+ASYRELE RK 
Sbjct: 121 HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKS 180

Query: 362 RVNDLDKLLTDMTLXXXXXXXXXXXXXXEDEIVCPTTGPVYKWRSERKR 216
           RVNDL+KL  DM L              EDEIVCPT+ PVYKWR+ERKR
Sbjct: 181 RVNDLEKLYMDMALQKELQKRGRKRKLREDEIVCPTSKPVYKWRAERKR 229


>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
           [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
           gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
           unknown protein / putative CGI-94 protein [Vitis
           vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
           product [Vitis vinifera]
          Length = 229

 Score =  270 bits (689), Expect = 5e-70
 Identities = 137/229 (59%), Positives = 162/229 (70%)
 Frame = -2

Query: 902 MSSLKNAVSRRAHKERSQPQWRKKFGHLEKHKDYKVRAEAFHXXXXXXXXXXXXXLNRNP 723
           MSS +NA+SRRA+KER+QP  RKKFG LEKHKDY VRA+AFH               RNP
Sbjct: 1   MSSFRNAISRRAYKERAQPHLRKKFGLLEKHKDYVVRAQAFHKKEEALQKLKEKAAFRNP 60

Query: 722 EEFYFGMIRTRTIDGVHRPESDAKQYTQEELMLMKTQDIGYIFXXXXXXXXXXXKLNSML 543
           +EFYF MI+TRT+DGVHRPES A +Y+ EELMLMKTQD+GY+            KL +ML
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYSPEELMLMKTQDMGYVLQKVQSEKKKIEKLTAML 120

Query: 542 HSLDNQLPNKHIYYAEDRDEAKEIRLRSSQGRKLPLSEDVPESIKRKTNASYRELEARKK 363
           HSLDNQ  N+H+YYAEDR+EA+EI+ +SS+G  LP  +DVP  IKRKT+ASYRELE RK 
Sbjct: 121 HSLDNQPTNRHVYYAEDREEAREIQAQSSRGGNLPSLDDVPNHIKRKTSASYRELETRKN 180

Query: 362 RVNDLDKLLTDMTLXXXXXXXXXXXXXXEDEIVCPTTGPVYKWRSERKR 216
           RVNDL+KL  DM L              EDEI CPT+ PVYKWR+ERKR
Sbjct: 181 RVNDLEKLYMDMALQKELQKRGRKRKLREDEIACPTSKPVYKWRAERKR 229


>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score =  267 bits (682), Expect = 3e-69
 Identities = 138/229 (60%), Positives = 159/229 (69%)
 Frame = -2

Query: 902 MSSLKNAVSRRAHKERSQPQWRKKFGHLEKHKDYKVRAEAFHXXXXXXXXXXXXXLNRNP 723
           MSSL+NA+ R+AHKERSQPQ RKK+G LEKHKDY VRA+AFH               RNP
Sbjct: 1   MSSLRNAIPRKAHKERSQPQSRKKYGLLEKHKDYIVRAKAFHKKEEALQRLKEKAAFRNP 60

Query: 722 EEFYFGMIRTRTIDGVHRPESDAKQYTQEELMLMKTQDIGYIFXXXXXXXXXXXKLNSML 543
           +EFYF MI+TRT+DGVHRPES A +YT+EEL+LMKTQDIGYI            KL + L
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQANKYTEEELLLMKTQDIGYILQKLQSEKKKIEKLTATL 120

Query: 542 HSLDNQLPNKHIYYAEDRDEAKEIRLRSSQGRKLPLSEDVPESIKRKTNASYRELEARKK 363
           HSL NQ  N+HIYY EDR+EAKE+R +SS    +P  E VPE IKRK N+SYRELEARKK
Sbjct: 121 HSLKNQPSNRHIYYVEDREEAKELRSQSSANEIVPALEHVPEQIKRKMNSSYRELEARKK 180

Query: 362 RVNDLDKLLTDMTLXXXXXXXXXXXXXXEDEIVCPTTGPVYKWRSERKR 216
           R N L+KL  DM L              EDEIVCPT+ P+YKWRSERKR
Sbjct: 181 RANQLEKLYADMALQKELQKKGKKRKLREDEIVCPTSKPIYKWRSERKR 229


>ref|XP_002322578.1| predicted protein [Populus trichocarpa] gi|222867208|gb|EEF04339.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  263 bits (673), Expect = 4e-68
 Identities = 134/229 (58%), Positives = 162/229 (70%)
 Frame = -2

Query: 902 MSSLKNAVSRRAHKERSQPQWRKKFGHLEKHKDYKVRAEAFHXXXXXXXXXXXXXLNRNP 723
           MSSL+NA+ R+AHKER+QPQ RKKFG LEKHKDY  RA+AFH              +RNP
Sbjct: 1   MSSLRNAIPRKAHKERAQPQARKKFGLLEKHKDYVARAKAFHKKEETLRRLKEKAASRNP 60

Query: 722 EEFYFGMIRTRTIDGVHRPESDAKQYTQEELMLMKTQDIGYIFXXXXXXXXXXXKLNSML 543
           +EFYFGMI+++T+DGVHRP+S+A +YTQEEL+LMKTQDIGYI            KL + L
Sbjct: 61  DEFYFGMIKSKTVDGVHRPQSEANKYTQEELLLMKTQDIGYILQKAQSEKKKIEKLTATL 120

Query: 542 HSLDNQLPNKHIYYAEDRDEAKEIRLRSSQGRKLPLSEDVPESIKRKTNASYRELEARKK 363
           HSLD +  +KHIY+AEDR+EAKEIR RSS+ +    S DVP++IKRK  +SYRELEARK 
Sbjct: 121 HSLDGRPSSKHIYFAEDREEAKEIRSRSSENKMATTSVDVPDNIKRKIASSYRELEARKN 180

Query: 362 RVNDLDKLLTDMTLXXXXXXXXXXXXXXEDEIVCPTTGPVYKWRSERKR 216
           R N L+K+  DM L              EDEIVCPTT PV+KWRSERKR
Sbjct: 181 RANQLEKIYMDMALQKELQKKGRKRKLREDEIVCPTTKPVFKWRSERKR 229


>ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Glycine max]
          Length = 229

 Score =  251 bits (641), Expect = 2e-64
 Identities = 130/230 (56%), Positives = 160/230 (69%), Gaps = 1/230 (0%)
 Frame = -2

Query: 902 MSSLKNAVSRRAHKERSQPQWRKKFGHLEKHKDYKVRAEAFHXXXXXXXXXXXXXLNRNP 723
           MSSL+NA+ RRAHKERSQP  RKKFG LEKHKDY  RA+AFH              NRN 
Sbjct: 1   MSSLRNAIPRRAHKERSQPSSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLREKAANRNE 60

Query: 722 EEFYFGMIRTRTIDGVHRPESDAKQYTQEELMLMKTQDIGYIFXXXXXXXXXXXKLNSML 543
           +EFYF M+RT+T+DGVH+PES+A +YTQEELMLMKTQD+GYI            +L + L
Sbjct: 61  DEFYFKMVRTKTVDGVHKPESEANKYTQEELMLMKTQDMGYILQKIQSERNKIERLTASL 120

Query: 542 HSLDNQLPNKHIYYAEDRDEAKEIRLRSSQGRKLPL-SEDVPESIKRKTNASYRELEARK 366
           HS+DNQ  NKH+++AEDR+EAKE+  R  Q  K+PL S D+P  IKRKT+ SY+ELEAR+
Sbjct: 121 HSIDNQPANKHVFFAEDREEAKELESRH-QKSKIPLTSGDIPAGIKRKTDRSYQELEARR 179

Query: 365 KRVNDLDKLLTDMTLXXXXXXXXXXXXXXEDEIVCPTTGPVYKWRSERKR 216
            R++ L+K+  DMT+              EDEIVCPTT PVY WR+ERKR
Sbjct: 180 GRLSQLEKIYMDMTMQKELQKKGRKRKLREDEIVCPTTKPVYMWRAERKR 229