BLASTX nr result

ID: Cimicifuga21_contig00008027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008027
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328646.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39
ref|XP_004138191.1| PREDICTED: protein Asterix-like isoform 2 [C...   161   7e-38
ref|XP_002317962.1| predicted protein [Populus trichocarpa] gi|1...   159   5e-37
gb|ABK94314.1| unknown [Populus trichocarpa]                          159   5e-37
ref|XP_003559302.1| PREDICTED: UPF0139 membrane protein At5g0796...   157   1e-36

>ref|XP_002328646.1| predicted protein [Populus trichocarpa] gi|222838822|gb|EEE77173.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score =  166 bits (419), Expect = 4e-39
 Identities = 81/106 (76%), Positives = 91/106 (85%), Gaps = 3/106 (2%)
 Frame = -1

Query: 533 MSSHNS---SANDPRQASTAKPFVPPTVSSQDLPVDYSGFIAVVFGIAGVLFKYKLSCWL 363
           MSSHN+   SANDPRQ   AKPFV P VS QDLPVDYSGFIAV+ G+AGV+F+YKL  WL
Sbjct: 1   MSSHNNNSASANDPRQPLAAKPFVAPMVSPQDLPVDYSGFIAVILGVAGVMFRYKLCSWL 60

Query: 362 AIIFCAQSLANMKNAETDLKQISMATMFAIMGLVTNYFGPARPGTQ 225
           A+IFCAQSL+NM+N E DLKQISMA+MFAIMGLVTNY GPARPG+Q
Sbjct: 61  ALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPGSQ 106


>ref|XP_004138191.1| PREDICTED: protein Asterix-like isoform 2 [Cucumis sativus]
          Length = 101

 Score =  161 bits (408), Expect = 7e-38
 Identities = 78/99 (78%), Positives = 85/99 (85%)
 Frame = -1

Query: 521 NSSANDPRQASTAKPFVPPTVSSQDLPVDYSGFIAVVFGIAGVLFKYKLSCWLAIIFCAQ 342
           ++ ANDPRQ S  KPFV P V+ QDLPVDYSGFIAVVFGIAGV+F+YKLS WLAIIFCAQ
Sbjct: 2   STQANDPRQPSAVKPFVAPAVNPQDLPVDYSGFIAVVFGIAGVMFRYKLSSWLAIIFCAQ 61

Query: 341 SLANMKNAETDLKQISMATMFAIMGLVTNYFGPARPGTQ 225
           SLANM+N E DLKQISMA MFAIMGLVTNY  PARPG +
Sbjct: 62  SLANMRNIENDLKQISMAMMFAIMGLVTNYLSPARPGAK 100


>ref|XP_002317962.1| predicted protein [Populus trichocarpa] gi|118483449|gb|ABK93624.1|
           unknown [Populus trichocarpa]
           gi|222858635|gb|EEE96182.1| predicted protein [Populus
           trichocarpa]
          Length = 107

 Score =  159 bits (401), Expect = 5e-37
 Identities = 76/106 (71%), Positives = 90/106 (84%), Gaps = 3/106 (2%)
 Frame = -1

Query: 533 MSSHNS---SANDPRQASTAKPFVPPTVSSQDLPVDYSGFIAVVFGIAGVLFKYKLSCWL 363
           MSSHN+   SANDPRQ S +K F+ P VS QD+PVDYSGF+AV+ G+AGV+F+YKL  WL
Sbjct: 1   MSSHNNNPASANDPRQPSASKSFLAPMVSPQDVPVDYSGFVAVILGVAGVMFRYKLCSWL 60

Query: 362 AIIFCAQSLANMKNAETDLKQISMATMFAIMGLVTNYFGPARPGTQ 225
           A+IFCAQSL+NM+N E DLKQISMA+MFAIMGLVTNY GPARP +Q
Sbjct: 61  ALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPASQ 106


>gb|ABK94314.1| unknown [Populus trichocarpa]
          Length = 107

 Score =  159 bits (401), Expect = 5e-37
 Identities = 76/106 (71%), Positives = 90/106 (84%), Gaps = 3/106 (2%)
 Frame = -1

Query: 533 MSSHN---SSANDPRQASTAKPFVPPTVSSQDLPVDYSGFIAVVFGIAGVLFKYKLSCWL 363
           MSSHN   +SANDPRQ S +K F+ P VS QD+PVDYSGF+AV+ G+AGV+F+YKL  WL
Sbjct: 1   MSSHNYNPASANDPRQPSASKSFLAPMVSPQDVPVDYSGFVAVILGVAGVMFRYKLCSWL 60

Query: 362 AIIFCAQSLANMKNAETDLKQISMATMFAIMGLVTNYFGPARPGTQ 225
           A+IFCAQSL+NM+N E DLKQISMA+MFAIMGLVTNY GPARP +Q
Sbjct: 61  ALIFCAQSLSNMRNMENDLKQISMASMFAIMGLVTNYLGPARPASQ 106


>ref|XP_003559302.1| PREDICTED: UPF0139 membrane protein At5g07960-like [Brachypodium
           distachyon]
          Length = 111

 Score =  157 bits (398), Expect = 1e-36
 Identities = 71/98 (72%), Positives = 86/98 (87%)
 Frame = -1

Query: 521 NSSANDPRQASTAKPFVPPTVSSQDLPVDYSGFIAVVFGIAGVLFKYKLSCWLAIIFCAQ 342
           ++ ANDPRQ +TA+P+ PP +SSQDLPVDY+GF+AVVFG+ GV+ +YK+  W+AIIFCAQ
Sbjct: 11  STGANDPRQPTTARPYAPPKLSSQDLPVDYAGFLAVVFGVIGVMLRYKVCSWIAIIFCAQ 70

Query: 341 SLANMKNAETDLKQISMATMFAIMGLVTNYFGPARPGT 228
           SLANMKN E DLKQ+SMA MFA+MGLVTNYFGP RPGT
Sbjct: 71  SLANMKNFENDLKQLSMAFMFAVMGLVTNYFGPPRPGT 108


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