BLASTX nr result

ID: Cimicifuga21_contig00008021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008021
         (1903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t...   865   0.0  
gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ...   865   0.0  
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ...   854   0.0  
ref|XP_002519806.1| serine hydroxymethyltransferase, putative [R...   853   0.0  
ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ...   841   0.0  

>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
            gi|222855489|gb|EEE93036.1| serine
            hydroxymethyltransferase 8 [Populus trichocarpa]
          Length = 529

 Score =  865 bits (2234), Expect = 0.0
 Identities = 427/529 (80%), Positives = 471/529 (89%), Gaps = 5/529 (0%)
 Frame = +2

Query: 122  MHACSGAAMNGVIQHPIWTKGCTFPCNKLHTSGFSYRVN-----PCKASNTEGSLVTGRP 286
            M A SGAA+ G +Q P+ +KG  FP  +    GF Y+V      PC+AS+ EGSLVTGRP
Sbjct: 1    MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60

Query: 287  PSSVSVPIPEHQGNKSGFVDPSLSDVDPEVYSIIGKEKQRQYKHLELIASENYTSRAVME 466
            PSSVSVPIPE   + S F D  L + DPEV  II KEK RQ+K LELIASEN+TSRAVME
Sbjct: 61   PSSVSVPIPETGADISSFKDYGLGEADPEVLEIINKEKDRQFKSLELIASENFTSRAVME 120

Query: 467  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALSAFHLDGEKWGVNVQPLSGSPA 646
            AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RAL++F+LDG+KWGVNVQPLSGSPA
Sbjct: 121  AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180

Query: 647  NFEVYTALLSPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSVYFESMPYRLDESTGLVDY 826
            NFEVYTALL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS+YFESMPYRLDESTGLVDY
Sbjct: 181  NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 827  EMLEKTAILFRPKLIIVGASAYPRDFDYPRARKIADAVGAFLMMDMAHISGLVAAQVVAN 1006
            +MLEKTAILFRPKLII GASAYPRDFDYPR RKIADAVGAFLMMDMAHISGLVAA VVA+
Sbjct: 241  DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 300

Query: 1007 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESAINNAVFPGLQGGPHNHTIGGL 1186
            PFEYCDVVTTTTHKSLRGPRGGMIFFKKD VLGVD+ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301  PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360

Query: 1187 AVCLKHAQTPEFKAYQGKVISNCKALARRLTELGYKLVSGGSDNHLVLVELRPVGIDGAR 1366
            AVCLKHAQ+PEFKAYQ +VI N +ALA R+ ELGYKLVSGGSDNHL+LV+LRP+G+DGAR
Sbjct: 361  AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420

Query: 1367 VEKILEMASITLNKNSVPGDKSAQVPGGIRIGTPGMTTRGFTEKEFVATADFLHEGIQIA 1546
            VEKIL+MASITLNKNSVPGDKSA VPGGIRIG+P MTTRGFTE EFVATAD +HEG+QI+
Sbjct: 421  VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTETEFVATADLIHEGVQIS 480

Query: 1547 LEAKKSTTGSKLQEFTKFIGSPDFYLNDRLADLRNRVEGLTTQFPLPGV 1693
            LEAKKS +GSKLQ+F KF+ SPDF L D+++DL+ RVE LTTQFP+PG+
Sbjct: 481  LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529


>gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]
          Length = 529

 Score =  865 bits (2234), Expect = 0.0
 Identities = 427/529 (80%), Positives = 472/529 (89%), Gaps = 5/529 (0%)
 Frame = +2

Query: 122  MHACSGAAMNGVIQHPIWTKGCTFPCNKLHTSGFSYRVN-----PCKASNTEGSLVTGRP 286
            M A SGAA+ G +Q P+ +KG  FP  +    GF Y+V      PC+AS+ EGSLVTGRP
Sbjct: 1    MQATSGAAVMGSLQQPVLSKGPAFPMKRSVIIGFPYQVKLNSVKPCRASSLEGSLVTGRP 60

Query: 287  PSSVSVPIPEHQGNKSGFVDPSLSDVDPEVYSIIGKEKQRQYKHLELIASENYTSRAVME 466
            PSSVSVPIPE   + S F D  LS+ DPEV  II KEK RQ+K LELIASEN+TSRAVME
Sbjct: 61   PSSVSVPIPETGADISSFKDYGLSEADPEVLEIIKKEKDRQFKSLELIASENFTSRAVME 120

Query: 467  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALSAFHLDGEKWGVNVQPLSGSPA 646
            AVGSCLTNKYSEGLPGKRYYGGNE+IDELETLCQ+RAL++F+LDG+KWGVNVQPLSGSPA
Sbjct: 121  AVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALASFNLDGKKWGVNVQPLSGSPA 180

Query: 647  NFEVYTALLSPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSVYFESMPYRLDESTGLVDY 826
            NFEVYTALL PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS+YFESMPYRLDESTGLVDY
Sbjct: 181  NFEVYTALLKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240

Query: 827  EMLEKTAILFRPKLIIVGASAYPRDFDYPRARKIADAVGAFLMMDMAHISGLVAAQVVAN 1006
            +MLEKTAILFRPKLII GASAYPRDFDYPR RKIADAVGAFLMMDMAHISGLV A VVA+
Sbjct: 241  DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVPASVVAD 300

Query: 1007 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESAINNAVFPGLQGGPHNHTIGGL 1186
            PFEYCDVVTTTTHKSLRGPRGGMIFFKKD VLGVD+ESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 301  PFEYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVDMESAINNAVFPGLQGGPHNHTIGGL 360

Query: 1187 AVCLKHAQTPEFKAYQGKVISNCKALARRLTELGYKLVSGGSDNHLVLVELRPVGIDGAR 1366
            AVCLKHAQ+PEFKAYQ +VI N +ALA R+ ELGYKLVSGGSDNHL+LV+LRP+G+DGAR
Sbjct: 361  AVCLKHAQSPEFKAYQKQVICNSRALANRMVELGYKLVSGGSDNHLILVDLRPLGLDGAR 420

Query: 1367 VEKILEMASITLNKNSVPGDKSAQVPGGIRIGTPGMTTRGFTEKEFVATADFLHEGIQIA 1546
            VEKIL++ASITLNKNSVPGDKSA VPGGIRIG+P MTTRGFTE+EFVATAD +HEG+QI+
Sbjct: 421  VEKILDIASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADLIHEGVQIS 480

Query: 1547 LEAKKSTTGSKLQEFTKFIGSPDFYLNDRLADLRNRVEGLTTQFPLPGV 1693
            LEAKKS +GSKLQ+F KF+ SPDF L D+++DLR RVE LTTQFP+PG+
Sbjct: 481  LEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529


>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
            vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
            product [Vitis vinifera]
          Length = 528

 Score =  854 bits (2207), Expect = 0.0
 Identities = 421/529 (79%), Positives = 470/529 (88%), Gaps = 5/529 (0%)
 Frame = +2

Query: 122  MHACSGAAMNGVIQHPIWTKGCTFPCNKLHTSGFSYR-----VNPCKASNTEGSLVTGRP 286
            M ACSG A  G +Q PIW KG +F  N    +GF ++     V PC+ S  +GSLVTG+P
Sbjct: 1    MQACSGTAAMGSLQQPIWIKGSSFAPNGSTVNGFPHQIKLNSVKPCR-SYIKGSLVTGKP 59

Query: 287  PSSVSVPIPEHQGNKSGFVDPSLSDVDPEVYSIIGKEKQRQYKHLELIASENYTSRAVME 466
            PSSVSV +P +  +   F+D  L++ DPEV +II KEKQRQ K LELIASEN+TSRAVME
Sbjct: 60   PSSVSVTVPGNGDSGVNFIDHGLNEADPEVCAIIYKEKQRQMKSLELIASENFTSRAVME 119

Query: 467  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALSAFHLDGEKWGVNVQPLSGSPA 646
            AVGSCLTNKYSEGLPGKRYYGGNE IDELETLCQ+RAL+AFHLDG+KWGVNVQPLSGSPA
Sbjct: 120  AVGSCLTNKYSEGLPGKRYYGGNEFIDELETLCQKRALAAFHLDGKKWGVNVQPLSGSPA 179

Query: 647  NFEVYTALLSPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSVYFESMPYRLDESTGLVDY 826
            NFEVYTALL+PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS+YFESMPYRLDESTGLVDY
Sbjct: 180  NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 239

Query: 827  EMLEKTAILFRPKLIIVGASAYPRDFDYPRARKIADAVGAFLMMDMAHISGLVAAQVVAN 1006
            +MLEKTA LFRPKLII GASAYPRDFDYPR RKIAD VGAFLMMDMAHISGLVAA VVA+
Sbjct: 240  DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADGVGAFLMMDMAHISGLVAASVVAD 299

Query: 1007 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESAINNAVFPGLQGGPHNHTIGGL 1186
            PFEYCD+VTTTTHKSLRGPRGGMIFFKKD+VLGVDLESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 300  PFEYCDIVTTTTHKSLRGPRGGMIFFKKDSVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359

Query: 1187 AVCLKHAQTPEFKAYQGKVISNCKALARRLTELGYKLVSGGSDNHLVLVELRPVGIDGAR 1366
            +VCLKHAQ+PEFKAYQ +V+SNC+ALA RL ELGY LVSGGSDNHL+LV+LRP+GIDGAR
Sbjct: 360  SVCLKHAQSPEFKAYQNQVVSNCRALAGRLIELGYNLVSGGSDNHLILVDLRPLGIDGAR 419

Query: 1367 VEKILEMASITLNKNSVPGDKSAQVPGGIRIGTPGMTTRGFTEKEFVATADFLHEGIQIA 1546
             EKIL+MASITLNKNSVPGDKSA VPGGIRIG+P MTTRGF+EKEF+ATADF+HEG+Q++
Sbjct: 420  AEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFIATADFIHEGVQLS 479

Query: 1547 LEAKKSTTGSKLQEFTKFIGSPDFYLNDRLADLRNRVEGLTTQFPLPGV 1693
            LEAKKS +GSKL +F KF+ SPDF L DR++DL+ RVE LTTQFP+PG+
Sbjct: 480  LEAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL 528


>ref|XP_002519806.1| serine hydroxymethyltransferase, putative [Ricinus communis]
            gi|223541045|gb|EEF42602.1| serine
            hydroxymethyltransferase, putative [Ricinus communis]
          Length = 527

 Score =  853 bits (2204), Expect = 0.0
 Identities = 420/529 (79%), Positives = 465/529 (87%), Gaps = 5/529 (0%)
 Frame = +2

Query: 122  MHACSGAAMNGVIQHPIWTKGCTFPCNKLHTSGFSYRVN-----PCKASNTEGSLVTGRP 286
            M  C+GA + G +Q P+W KG + P  + +  GF +++      PC+  N +GSLV GRP
Sbjct: 1    MQGCTGAQVMGSLQQPVWIKGSSLPLKQSNFVGFPHQIKLNSFRPCRYLNIQGSLVAGRP 60

Query: 287  PSSVSVPIPEHQGNKSGFVDPSLSDVDPEVYSIIGKEKQRQYKHLELIASENYTSRAVME 466
            PSSVSVP  E +G++S F D  LS+ DPEV  II KEK RQ+K LELIASEN+TSRAVME
Sbjct: 61   PSSVSVP--EIEGDRSSFKDYGLSEADPEVREIIEKEKNRQFKSLELIASENFTSRAVME 118

Query: 467  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALSAFHLDGEKWGVNVQPLSGSPA 646
            AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERAL+AF LD +KWGVNVQPLSGSPA
Sbjct: 119  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALAAFGLDRKKWGVNVQPLSGSPA 178

Query: 647  NFEVYTALLSPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSVYFESMPYRLDESTGLVDY 826
            NFEVYTALL+PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS+YFESMPYRLDESTGLVDY
Sbjct: 179  NFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 238

Query: 827  EMLEKTAILFRPKLIIVGASAYPRDFDYPRARKIADAVGAFLMMDMAHISGLVAAQVVAN 1006
            +MLEKTA LFRPKLII GASAYPRDFDYPR RKIADAVGAFLMMDMAHISGLVAA VV +
Sbjct: 239  DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGD 298

Query: 1007 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESAINNAVFPGLQGGPHNHTIGGL 1186
            PFEYCD+VTTTTHKSLRGPRGGMIFF+KDT+LGVDLESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 299  PFEYCDIVTTTTHKSLRGPRGGMIFFRKDTILGVDLESAINNAVFPGLQGGPHNHTIGGL 358

Query: 1187 AVCLKHAQTPEFKAYQGKVISNCKALARRLTELGYKLVSGGSDNHLVLVELRPVGIDGAR 1366
            AVCLKHAQ+PEFKAYQ +VISNC+ALA RL ELGYKLVSGGSDNHLVLV+LRP+GIDGAR
Sbjct: 359  AVCLKHAQSPEFKAYQKQVISNCRALAYRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 418

Query: 1367 VEKILEMASITLNKNSVPGDKSAQVPGGIRIGTPGMTTRGFTEKEFVATADFLHEGIQIA 1546
            VEKIL+MASITLNKNSVPGDKSA VPGGIRIG+P MTTRGFTE+EF+ATADF+HEG+QI 
Sbjct: 419  VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFIATADFIHEGVQIT 478

Query: 1547 LEAKKSTTGSKLQEFTKFIGSPDFYLNDRLADLRNRVEGLTTQFPLPGV 1693
             EAKKS +GSKLQ+F K + SPDF L   ++DL+ RVE L TQF +PGV
Sbjct: 479  TEAKKSVSGSKLQDFMKLVASPDFSLASEVSDLQTRVEALATQFSIPGV 527


>ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
            [Cucumis sativus] gi|449519543|ref|XP_004166794.1|
            PREDICTED: serine hydroxymethyltransferase,
            mitochondrial-like [Cucumis sativus]
          Length = 528

 Score =  841 bits (2172), Expect = 0.0
 Identities = 418/529 (79%), Positives = 460/529 (86%), Gaps = 5/529 (0%)
 Frame = +2

Query: 122  MHACSGAAMNGVIQHPIWTKGCTFPCNKLHTSGFSYR-----VNPCKASNTEGSLVTGRP 286
            M A SG A+ G +Q  +  KG  FP        F  +     + PCK+   E S+V G+P
Sbjct: 1    MQATSGVAVMGSLQVAVCGKGSCFPSKSSSICVFPQQKKMNILKPCKSFKVEASMVAGKP 60

Query: 287  PSSVSVPIPEHQGNKSGFVDPSLSDVDPEVYSIIGKEKQRQYKHLELIASENYTSRAVME 466
             SSVSV +PE  G  S FVD +LS+ DPEV SII KEKQRQ+K LELIASEN+TSRAVME
Sbjct: 61   SSSVSVTVPEI-GGVSNFVDHALSETDPEVRSIIDKEKQRQFKSLELIASENFTSRAVME 119

Query: 467  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQERALSAFHLDGEKWGVNVQPLSGSPA 646
            AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQ+RAL+AFHLD  KWGVNVQPLSGSPA
Sbjct: 120  AVGSCLTNKYSEGLPGKRYYGGNEHIDELETLCQQRALAAFHLDNNKWGVNVQPLSGSPA 179

Query: 647  NFEVYTALLSPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSVYFESMPYRLDESTGLVDY 826
            NFEVYTA+L+PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS+YFESMPYRLDE+TG+VDY
Sbjct: 180  NFEVYTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDETTGIVDY 239

Query: 827  EMLEKTAILFRPKLIIVGASAYPRDFDYPRARKIADAVGAFLMMDMAHISGLVAAQVVAN 1006
            +MLEKTA LFRPKLII GASAYPRDFDYPR RKIADAVGAFLMMDMAHISGLVAA VVA+
Sbjct: 240  DMLEKTANLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVAD 299

Query: 1007 PFEYCDVVTTTTHKSLRGPRGGMIFFKKDTVLGVDLESAINNAVFPGLQGGPHNHTIGGL 1186
            PFEYCD+VTTTTHKSLRGPRGGMIFF+KD VLGVDLESAINNAVFPGLQGGPHNHTIGGL
Sbjct: 300  PFEYCDIVTTTTHKSLRGPRGGMIFFRKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGL 359

Query: 1187 AVCLKHAQTPEFKAYQGKVISNCKALARRLTELGYKLVSGGSDNHLVLVELRPVGIDGAR 1366
            AVCLKHAQ+PEFK YQ KVI+NC+ALA RL ELGYKLVSGGSDNHLVLV+LRP+GIDGAR
Sbjct: 360  AVCLKHAQSPEFKVYQNKVIANCRALANRLVELGYKLVSGGSDNHLVLVDLRPLGIDGAR 419

Query: 1367 VEKILEMASITLNKNSVPGDKSAQVPGGIRIGTPGMTTRGFTEKEFVATADFLHEGIQIA 1546
            VEKIL+MASITLNKNSVPGDKSA VPGGIRIG+P MTTRGFTEKEFVA ADF+HEG++I 
Sbjct: 420  VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVKIT 479

Query: 1547 LEAKKSTTGSKLQEFTKFIGSPDFYLNDRLADLRNRVEGLTTQFPLPGV 1693
            L+AK    GSKLQEF KF+ + DF L DR++DLR+RVE LTTQFP+PG+
Sbjct: 480  LDAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPGL 528


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