BLASTX nr result
ID: Cimicifuga21_contig00007995
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007995
(3399 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266... 719 0.0
emb|CBI34075.3| unnamed protein product [Vitis vinifera] 713 0.0
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 558 e-156
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis] 539 e-150
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 536 e-149
>ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera]
Length = 719
Score = 719 bits (1855), Expect = 0.0
Identities = 360/615 (58%), Positives = 447/615 (72%), Gaps = 1/615 (0%)
Frame = -2
Query: 2882 VMKERRKRKEFEVFVGGLDRDATDEDLRKVFSHVGEVTEVRLMRNPLTNKNKGFAFLRFA 2703
++KERRKRKEFEVFVGGLDRD T++DL F VG++TEVRLM+N LT KNKGFAF+RFA
Sbjct: 115 LVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFA 174
Query: 2702 TIEQARRAVNELKHPTVNGKQCGVSPSQDSDTLFVGNVCKTWTKAVFKEKLLQYGVDNFE 2523
T+EQARRAVNELKHP +NGKQCGV+PSQDSDTLFVGN+CKTWTK K+KL YGVD +E
Sbjct: 175 TVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYE 234
Query: 2522 ELTLVEDAKNEGQNRGFAFLDFSCRADALDACKRLQKMDVVFGTDRTAKVAFADTFIEPD 2343
+LTLVED KNEG NRGFAFLDFS RADAL+ACKRLQK DVVFGTDRTA+VAFADTFIEPD
Sbjct: 235 DLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPD 294
Query: 2342 DEIMAQVKTVFLDGLPASWDEDRVTEHVKRFGKVEKVELARNMPAAKRTDFGFITFDTHD 2163
DEIM+QV+T+FLDGLPA+WDEDRV +++K+FG++EK+ELARNMPAAKRTDFGF+TFDTHD
Sbjct: 295 DEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHD 354
Query: 2162 AAVGCVDGVNNAELGDGDKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXXXXXX 1983
+AV CVD +NN+EL DG++ VKVRARLSRPRQRGKS++HA
Sbjct: 355 SAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAPWGS 414
Query: 1982 XXSHVDSWRFESRNGRGIQSRRTYTGGSRQPLGPRDRYPVTDVAXXXXXXXXXXXXXXXS 1803
S +DSW+F R GR +Q+R Y GG ++P+GPRDR+ + ++ S
Sbjct: 415 SSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSPESS 474
Query: 1802 FGRRSPGLAYGRSSSKREYVRSNEHYPRSSGYVSGARSSDYVSKTRSSDFATKAPTERRW 1623
FGRRSP Y +SS+KREY++ +E + R + + + PTERR+
Sbjct: 475 FGRRSP--VYEKSSTKREYIQRDESFSRPAVF-------------------ARDPTERRY 513
Query: 1622 SYRDAYPSRESEYLDSPPRTATRGVARRPPPPYAEESYGRHVERPSSYRGSHSHDYGSLS 1443
Y+D Y SR SEYLDSPPR +R R P Y ++ Y R++ERP++Y H HDYGS+S
Sbjct: 514 -YKDNYSSRGSEYLDSPPRNVSRAAGHR-APLYEDDDYDRYLERPTNYHDGHRHDYGSIS 571
Query: 1442 GSKRPHSSMEEYQARFSESTLRQPRSRFDYGVSSDDMPYSDRVYGSEPTASRQ-GRGSHL 1266
SKR HS+MEE +R++E +R R+RFDYG S+ +PY D YGSE T+ R+ GRGS L
Sbjct: 572 SSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDH-YGSESTSERRMGRGSRL 630
Query: 1265 GYDXXXXXXXXXXXGVYDTHTSSAPYSRDEVRRGDMGGTYSSYDREYPSRDYTSTDADVG 1086
GYD G+Y+T TS+ Y RD++ RG+ G YSSYDREY SRDY + +D+G
Sbjct: 631 GYDGGMRSSSGHSRGMYETRTSTTGYRRDDISRGNEEGMYSSYDREYMSRDYMPSRSDLG 690
Query: 1085 PASYSSLYPSRRVSD 1041
SY S YPSRR++D
Sbjct: 691 TGSYPSDYPSRRMND 705
>emb|CBI34075.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 713 bits (1841), Expect = 0.0
Identities = 360/618 (58%), Positives = 447/618 (72%), Gaps = 4/618 (0%)
Frame = -2
Query: 2882 VMKERRKRKEFEVFVGGLDRDATDEDLRKVFSHVGEVTEVRLMRNPLTNKNKGFAFLRFA 2703
++KERRKRKEFEVFVGGLDRD T++DL F VG++TEVRLM+N LT KNKGFAF+RFA
Sbjct: 176 LVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFA 235
Query: 2702 TIEQARRAVNELKHPTVNGKQCGVSPSQDSDTLFVGNVCKTWTKAVFKEKLLQYGVDNFE 2523
T+EQARRAVNELKHP +NGKQCGV+PSQDSDTLFVGN+CKTWTK K+KL YGVD +E
Sbjct: 236 TVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYE 295
Query: 2522 ELTLVEDAKNEGQNRGFAFLDFSCRADALDACKRLQKMDVVFGTDRTAKVAFADTFIEPD 2343
+LTLVED KNEG NRGFAFLDFS RADAL+ACKRLQK DVVFGTDRTA+VAFADTFIEPD
Sbjct: 296 DLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPD 355
Query: 2342 DEIMAQVKTVFLDGLPASWDEDRVTEHVKRFGKVEKVELARNMPAAKRTDFGFITFDTHD 2163
DEIM+QV+T+FLDGLPA+WDEDRV +++K+FG++EK+ELARNMPAAKRTDFGF+TFDTHD
Sbjct: 356 DEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHD 415
Query: 2162 AAVGCVDGVNNAELGDGDKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXXXXXX 1983
+AV CVD +NN+EL DG++ VKVRARLSRPRQRGKS++HA
Sbjct: 416 SAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAPWGS 475
Query: 1982 XXSHVDSWRFESRNGRGIQSRRTYTGGSRQPLGPRDRYPVTDVAXXXXXXXXXXXXXXXS 1803
S +DSW+F R GR +Q+R Y GG ++P+GPRDR+ + ++ S
Sbjct: 476 SSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSPESS 535
Query: 1802 FGRRSPGLAYGRSSSKREYVRSNEHYPRSSGYVSGARSSDYVSKTRSSDFATKAPTERRW 1623
FGRRSP Y +SS+KREY++ +E + R + + + PTERR+
Sbjct: 536 FGRRSP--VYEKSSTKREYIQRDESFSRPAVF-------------------ARDPTERRY 574
Query: 1622 SYRDAYPSRESEYLDSPPRTATRGVARRPPPPYAEESYGRHVERPSSYRGSHSHDYGSLS 1443
Y+D Y SR SEYLDSPPR +R R P Y ++ Y R++ERP++Y H HDYGS+S
Sbjct: 575 -YKDNYSSRGSEYLDSPPRNVSRAAGHR-APLYEDDDYDRYLERPTNYHDGHRHDYGSIS 632
Query: 1442 GSKRPHSSMEEYQARFSESTLRQPRSRFDYGVSSDDMPYSDRVYGSEPTASRQ-GRGSHL 1266
SKR HS+MEE +R++E +R R+RFDYG S+ +PY D YGSE T+ R+ GRGS L
Sbjct: 633 SSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDH-YGSESTSERRMGRGSRL 691
Query: 1265 GYDXXXXXXXXXXXGVYDTHTSSAPYSR---DEVRRGDMGGTYSSYDREYPSRDYTSTDA 1095
GYD G+Y+T TS+ Y R D++ RG+ G YSSYDREY SRDY + +
Sbjct: 692 GYDGGMRSSSGHSRGMYETRTSTTGYRRVLADDISRGNEEGMYSSYDREYMSRDYMPSRS 751
Query: 1094 DVGPASYSSLYPSRRVSD 1041
D+G SY S YPSRR++D
Sbjct: 752 DLGTGSYPSDYPSRRMND 769
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 558 bits (1437), Expect = e-156
Identities = 322/614 (52%), Positives = 393/614 (64%), Gaps = 2/614 (0%)
Frame = -2
Query: 2882 VMKERRKRKEFEVFVGGLDRDATDEDLRKVFSHVGEVTEVRLMRNPLTNKNKGFAFLRFA 2703
V KERRKRKEFEVFVGGLD+DAT++DLRKVFS VGEVTEVRLM NP T KNKGFAFLRFA
Sbjct: 222 VFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFA 281
Query: 2702 TIEQARRAVNELKHPTVNGKQCGVSPSQDSDTLFVGNVCKTWTKAVFKEKLLQYGVDNFE 2523
T+EQA+RAV ELK+P VNGKQCGV+PSQDSDTLF+GN+CKTWTK KEKL YGV+N E
Sbjct: 282 TVEQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVE 341
Query: 2522 ELTLVEDAKNEGQNRGFAFLDFSCRADALDACKRLQKMDVVFGTDRTAKVAFADTFIEPD 2343
+LTLVED+ NEG NRGFAFL+FS R+DA+DA KRLQK DVVFG DRTAKV+FAD+FI+P
Sbjct: 342 DLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPG 401
Query: 2342 DEIMAQVKTVFLDGLPASWDEDRVTEHVKRFGKVEKVELARNMPAAKRTDFGFITFDTHD 2163
DEIMAQVKTVF+DGLPASWDEDRV E +K++G++EK+ELARNMP+AKR DFGF+TFDTHD
Sbjct: 402 DEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHD 461
Query: 2162 AAVGCVDGVNNAELGDGDKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXXXXXX 1983
AAV C +NNAELG+G+ K KVRARLSRP QRGK +H
Sbjct: 462 AAVTCAKSINNAELGEGENKAKVRARLSRPLQRGK-GKHISRGDFRPGRGGPVRGVRGSW 520
Query: 1982 XXSHVDSWRFESRNGRGIQSRRTYTGGSRQPLGPRDRYPVTDVAXXXXXXXXXXXXXXXS 1803
+ S F R RG+ R ++P+G RDR PV + S
Sbjct: 521 ARPALRS--FPGRGARGL-GPRLPPAAVKRPIGFRDRRPVMAM----PPRGRPLPPPSRS 573
Query: 1802 FGRRSPGLAYGRSSSKREYVRSNEHYPRSSGYVSGARSSDYVSKTRSSDFATKAPTERRW 1623
+ RR+P AY + + KR+Y R E RS V D+ ++ ERR
Sbjct: 574 YDRRAPVPAYPKPNLKRDYGRREEVPLRSRPAV---------------DYGSRVAPERRP 618
Query: 1622 SYRDAYPSRESEYLDSPPRTATRGVARRPPPPYAEESYGRHVER--PSSYRGSHSHDYGS 1449
SYRD Y +R S Y D PR +R ARR Y +++YG+ ER P SYR DY S
Sbjct: 619 SYRDDYATRGSGYSDI-PRNTSRTAARR---TYEDDAYGQRFERPPPPSYREGRPRDYDS 674
Query: 1448 LSGSKRPHSSMEEYQARFSESTLRQPRSRFDYGVSSDDMPYSDRVYGSEPTASRQGRGSH 1269
++GSKRP+ ++++ R++++++RQ R+R DY +S+ Y D YG R GR S+
Sbjct: 675 IAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGD-AYG-----DRLGR-SN 727
Query: 1268 LGYDXXXXXXXXXXXGVYDTHTSSAPYSRDEVRRGDMGGTYSSYDREYPSRDYTSTDADV 1089
LGY + Y D+GG YSS Y S DY ADV
Sbjct: 728 LGYGGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGSDVGGMYSS---SYGS-DYMPRGADV 783
Query: 1088 GPASYSSLYPSRRV 1047
G +SYSSLY SR V
Sbjct: 784 GGSSYSSLYSSRGV 797
>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
Length = 775
Score = 539 bits (1388), Expect = e-150
Identities = 317/620 (51%), Positives = 387/620 (62%), Gaps = 8/620 (1%)
Frame = -2
Query: 2882 VMKERRKRKEFEVFVGGLDRDATDEDLRKVFSHVGEVTEVRLMRNPLTNKNKGFAFLRFA 2703
+ +ERRKRKEFEVFVGGLD+D +DLRKVFS VGEVTEVRLM NP T KNKGFAFLRFA
Sbjct: 187 MFQERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFA 246
Query: 2702 TIEQARRAVNELKHPTVNGKQCGVSPSQDSDTLFVGNVCKTWTKAVFKEKLLQYGVDNFE 2523
T+EQAR+AV ELK+P +NGKQCGV+PSQDSDTLF+GN+CKTWTK KEKL YGVDN E
Sbjct: 247 TVEQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVE 306
Query: 2522 ELTLVEDAKNEGQNRGFAFLDFSCRADALDACKRLQKMDVVFGTDRTAKVAFADTFIEPD 2343
+LTLVED+ NEG NRGFAFL+FS R+DA+DA KRLQK DV+FG DR AKV+FAD+FI+P
Sbjct: 307 DLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPG 366
Query: 2342 DEIMAQVKTVFLDGLPASWDEDRVTEHVKRFGKVEKVELARNMPAAKRTDFGFITFDTHD 2163
DEIMAQVKTVF+DGLPASWDEDRV E +K +G++ K+ELARNMP+AKR DFGF+TFDTHD
Sbjct: 367 DEIMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHD 426
Query: 2162 AAVGCVDGVNNAELGDGDKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXXXXXX 1983
AAV C +NNAELG+GD K KVRARLSRP QRGK +HA
Sbjct: 427 AAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGK-GKHASRGDFRSGRGTGRATR---- 481
Query: 1982 XXSHVDSWRFES------RNGRGIQSRRTYTGGSRQPLGPRDRYPVTDVAXXXXXXXXXX 1821
SW S R+ RGI SR ++P+ RDR P+ +
Sbjct: 482 -----GSWGLPSPRSLPGRSARGIGSRLP-PASVKRPVPVRDRRPIMSMT---ARARPMP 532
Query: 1820 XXXXXSFGRRSPGLAYGRSSSKREYVRSNE-HYPRSSGYVSGARSSDYVSKTRSSDFATK 1644
S+ RR+P +Y + KREY R +E PRS V D+ ++
Sbjct: 533 PPPPRSYDRRAPVPSYPKPGLKREYGRRDEVPPPRSRAPV---------------DYGSR 577
Query: 1643 APTERRWSYRDAYPSRESEYLDSPPRTATRGVARRPPPPYAEESYGRHVER-PSSYRGSH 1467
+RR YRD Y SR S Y D PR+ +RG ARR PY ++ Y + ER P SYR
Sbjct: 578 VVPDRR-PYRDEYTSRGSGYPDM-PRSTSRGAARR---PYVDDGYAQRFERPPPSYREGR 632
Query: 1466 SHDYGSLSGSKRPHSSMEEYQARFSESTLRQPRSRFDYGVSSDDMPYSDRVYGSEPTASR 1287
+ DY ++SGSKRP+S +++ R+++ +R R+R DY + Y D YG R
Sbjct: 633 ARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD-AYG-----DR 686
Query: 1286 QGRGSHLGYDXXXXXXXXXXXGVYDTHTSSAPYSRDEVRRGDMGGTYSSYDREYPSRDYT 1107
GR S+LGY + Y GD+GG YSS Y S DY
Sbjct: 687 MGR-SNLGYGGSRSSISSQDSHGLYSSRQGMGYG-GSYSGGDVGGMYSS---SYGS-DYM 740
Query: 1106 STDADVGPASYSSLYPSRRV 1047
+DVG +SYSS+YP R V
Sbjct: 741 PRGSDVGGSSYSSMYPGRGV 760
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 536 bits (1381), Expect = e-149
Identities = 317/615 (51%), Positives = 386/615 (62%), Gaps = 5/615 (0%)
Frame = -2
Query: 2882 VMKERRKRKEFEVFVGGLDRDATDEDLRKVFSHVGEVTEVRLMRNPLTNKNKGFAFLRFA 2703
V KERRKRKEFEVFVGGLD+DAT++DLRKVF+ VGEVTEVRLM NP T KNKGFAFLRF+
Sbjct: 203 VFKERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFS 262
Query: 2702 TIEQARRAVNELKHPTVNGKQCGVSPSQDSDTLFVGNVCKTWTKAVFKEKLLQYGVDNFE 2523
T+EQA++AV ELK+P +NGKQCGV+PSQDSDTLF+GN+CKTWTK KEKL YGV+N E
Sbjct: 263 TVEQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVE 322
Query: 2522 ELTLVEDAKNEGQNRGFAFLDFSCRADALDACKRLQKMDVVFGTDRTAKVAFADTFIEPD 2343
++TLVED+ NEG NRGFAFL+FS R+DA+DA KRLQK DV+FG DR AKV+FAD+FI+P
Sbjct: 323 DVTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPG 382
Query: 2342 DEIMAQVKTVFLDGLPASWDEDRVTEHVKRFGKVEKVELARNMPAAKRTDFGFITFDTHD 2163
DEIMAQVKTVF+DGLPASWDEDRV E +K+FG++EK+ELARNMP+AKR DFGF+TFD+HD
Sbjct: 383 DEIMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHD 442
Query: 2162 AAVGCVDGVNNAELGDGDKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXXXXXXX 1983
AAV C +NNAELG+GD K KVRARLSRP QRGK +HA
Sbjct: 443 AAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGK-GKHASRADFRSWYGGRTAR----- 496
Query: 1982 XXSHVDSWRFESRNGRGIQSRRTYTGGSRQPLGPRDRYPVTDVAXXXXXXXXXXXXXXXS 1803
W R RGI SR T R +G RDR P +
Sbjct: 497 -----GPW---VRPVRGIASRAAPTSVKRH-VGLRDRRP---PVMSMPVRGRPLPPPNRT 544
Query: 1802 FGRRSPGLAYGRSSSKREYVRSNE-HYPRSSGYVSGARSSDYVSKTRSSDFATKAPTERR 1626
+ RR+P +Y +SS KR+Y R E PRS V D+++++ ERR
Sbjct: 545 YDRRAPAPSYPKSSLKRDYGRREELPPPRSRAPV---------------DYSSRSVAERR 589
Query: 1625 WSYRDAYPSRESEYLDSPPRTATRGVARRPPPPYAEESYGRHVER-PSSYRGSHSHDYGS 1449
SYRD Y SR S Y D PR +R ARR Y ++ YG+ +ER P SYR + DY S
Sbjct: 590 QSYRDDYSSRGSGYSDI-PRGTSRSSARR---AYVDDGYGQRLERHPPSYREGRARDYDS 645
Query: 1448 LSGSKRPHSSMEEYQARFSE--STLRQPRSRFDYGVSSDDMPYSDRVYGSEPTASRQGRG 1275
+SGSKRP+S+M++ R+++ + R R+R DY + Y D YG R GR
Sbjct: 646 ISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYELGPSASQYGD-AYG-----DRIGRS 699
Query: 1274 SHLGYDXXXXXXXXXXXGVYDTHTSSAPYSRDEVRRGDMGGTY-SSYDREYPSRDYTSTD 1098
S +GY T Y D+GG Y SSY DY
Sbjct: 700 S-VGYGGSRSSLSSQDSHGLYTSRQGMGYG-GSYGANDVGGMYQSSY-----GGDYMPRG 752
Query: 1097 ADVGPASYSSLYPSR 1053
+DVG SYSS+Y SR
Sbjct: 753 SDVGSRSYSSIYSSR 767