BLASTX nr result
ID: Cimicifuga21_contig00007989
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00007989 (1268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529740.1| ribosome biogenesis protein brix, putative [... 504 e-140 ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 ... 491 e-136 ref|XP_002317510.1| predicted protein [Populus trichocarpa] gi|2... 491 e-136 emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera] 490 e-136 ref|XP_003552625.1| PREDICTED: ribosome biogenesis protein BRX1-... 487 e-135 >ref|XP_002529740.1| ribosome biogenesis protein brix, putative [Ricinus communis] gi|223530781|gb|EEF32647.1| ribosome biogenesis protein brix, putative [Ricinus communis] Length = 312 Score = 504 bits (1298), Expect = e-140 Identities = 241/312 (77%), Positives = 260/312 (83%) Frame = -1 Query: 1256 MAKKRKHSXXXXXXXXXXXXXXXPRPKRTLLGWKDKVDVKPTNSAFFRNKEKVLVTCSRR 1077 M KKRKHS RPKRTLLGWKDK +VKPT + FRNKEKVLVTCSRR Sbjct: 1 MGKKRKHSETEVAAPEKKDESAAERPKRTLLGWKDKSEVKPTETQGFRNKEKVLVTCSRR 60 Query: 1076 IIYRYRHLMLNVVSILPHCKKDNKIESKQSKGAALNEIVELRNCSSCLFFECRKQKDLYL 897 I YRYRHLMLN+VS+LPHCKKDNK+ESK SKG ALNE+VEL+ SSCLFFECRK KDLYL Sbjct: 61 INYRYRHLMLNIVSLLPHCKKDNKVESKSSKGMALNELVELKGSSSCLFFECRKHKDLYL 120 Query: 896 WMAKCPNGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSASFDKDPHWKLLKEIIMQI 717 WMAKCP GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSA+FDKD HWKLLKE++MQI Sbjct: 121 WMAKCPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSANFDKDAHWKLLKEMLMQI 180 Query: 716 FGIPKDHRKAKPYHDHVFVFSIVDDHIWFRNYQISVPHNEADKVDRGGLDKMTLVEVGPR 537 FG PK+HRK+KPYHDHVFVFSIVDDHIWFRNYQISVPHNE+DKV RGGLDKMTLVEVGPR Sbjct: 181 FGTPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVVRGGLDKMTLVEVGPR 240 Query: 536 FCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEXXXXXXXXXXXXXXXXXXKMHEETNT 357 FCLNPIKIFGGSFGGPTLYENPFY+SPNQIRALE KMHE +N Sbjct: 241 FCLNPIKIFGGSFGGPTLYENPFYISPNQIRALEKRKKAGKFEKKVKAKTRRKMHEMSNP 300 Query: 356 LEPDEFADLWKD 321 L PDEFAD+W++ Sbjct: 301 LVPDEFADMWRE 312 >ref|XP_002270029.1| PREDICTED: ribosome biogenesis protein BRX1 homolog [Vitis vinifera] gi|297744237|emb|CBI37207.3| unnamed protein product [Vitis vinifera] Length = 316 Score = 491 bits (1265), Expect = e-136 Identities = 235/316 (74%), Positives = 258/316 (81%), Gaps = 4/316 (1%) Frame = -1 Query: 1256 MAKKRKHSXXXXXXXXXXXXXXXPRPKRTLLGWKDKVDVKP----TNSAFFRNKEKVLVT 1089 M KKRKHS RPKRTLLGWKD + ++S FRNKEKVLVT Sbjct: 1 MGKKRKHSEANVAEPPKKDSDAPERPKRTLLGWKDPTPTETKEIESSSPIFRNKEKVLVT 60 Query: 1088 CSRRIIYRYRHLMLNVVSILPHCKKDNKIESKQSKGAALNEIVELRNCSSCLFFECRKQK 909 CSRRI YRYRHLML++VS+LPH KKDNK+ESK+SKGA LNE+VEL+NCSSCLFFECRKQK Sbjct: 61 CSRRISYRYRHLMLSIVSLLPHAKKDNKVESKESKGATLNELVELKNCSSCLFFECRKQK 120 Query: 908 DLYLWMAKCPNGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSASFDKDPHWKLLKEI 729 DLYLWMAKCPNGPSVKF+V+AVHTMEELKLTGNHLKGSRPLLTFS +FDKDPHWKLLKE+ Sbjct: 121 DLYLWMAKCPNGPSVKFMVDAVHTMEELKLTGNHLKGSRPLLTFSTNFDKDPHWKLLKEM 180 Query: 728 IMQIFGIPKDHRKAKPYHDHVFVFSIVDDHIWFRNYQISVPHNEADKVDRGGLDKMTLVE 549 I QIFG PK+HRKAKPYHDHVF FS+ DDHIWFRNYQISVPHNE+DKVDRGGLDK+TLVE Sbjct: 181 ITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQISVPHNESDKVDRGGLDKITLVE 240 Query: 548 VGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEXXXXXXXXXXXXXXXXXXKMHE 369 VGPRFCLNPIKIFGGSFGGPTLYENPFY+SPN+IRAL+ KMHE Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPFYISPNEIRALKKRKAAGKYAKKVKAKTRRKMHE 300 Query: 368 ETNTLEPDEFADLWKD 321 N LE DEFAD+WK+ Sbjct: 301 LENPLEADEFADMWKE 316 >ref|XP_002317510.1| predicted protein [Populus trichocarpa] gi|222860575|gb|EEE98122.1| predicted protein [Populus trichocarpa] Length = 317 Score = 491 bits (1264), Expect = e-136 Identities = 239/317 (75%), Positives = 259/317 (81%), Gaps = 5/317 (1%) Frame = -1 Query: 1256 MAKKRKHSXXXXXXXXXXXXXXXPRPKRTLLGWKDKVDVKPTNS-----AFFRNKEKVLV 1092 M KKRKHS RPKRTLLGWKDK + K T S FRNKEKVLV Sbjct: 1 MGKKRKHSETQVIEPAKKDESETERPKRTLLGWKDKPEEKETESLPPHQGGFRNKEKVLV 60 Query: 1091 TCSRRIIYRYRHLMLNVVSILPHCKKDNKIESKQSKGAALNEIVELRNCSSCLFFECRKQ 912 TCSRRI YRYRHLMLN+VS+LPHCKKD+K+ES SKGA LNE+VEL+NCSS LFFECRK Sbjct: 61 TCSRRINYRYRHLMLNLVSLLPHCKKDSKVESTSSKGATLNELVELKNCSSSLFFECRKH 120 Query: 911 KDLYLWMAKCPNGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSASFDKDPHWKLLKE 732 KDLYLWM KCP+GPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSA+FDKD HWKLLKE Sbjct: 121 KDLYLWMVKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSANFDKDAHWKLLKE 180 Query: 731 IIMQIFGIPKDHRKAKPYHDHVFVFSIVDDHIWFRNYQISVPHNEADKVDRGGLDKMTLV 552 +I+QIFGIPKDHRK+KP++DHVFVFSIVDDHIWFRNYQISVPHNE DK+ RGGLDKMTLV Sbjct: 181 MIIQIFGIPKDHRKSKPFYDHVFVFSIVDDHIWFRNYQISVPHNETDKMARGGLDKMTLV 240 Query: 551 EVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEXXXXXXXXXXXXXXXXXXKMH 372 EVGPRFCLNPIKIFGGSFGGPTLYENPF++SPNQIRALE KMH Sbjct: 241 EVGPRFCLNPIKIFGGSFGGPTLYENPFFISPNQIRALEKKQKAGKFAKKVKAKTRRKMH 300 Query: 371 EETNTLEPDEFADLWKD 321 E +N LEPDEFAD+WK+ Sbjct: 301 ELSNPLEPDEFADMWKE 317 >emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera] Length = 316 Score = 490 bits (1261), Expect = e-136 Identities = 236/316 (74%), Positives = 259/316 (81%), Gaps = 4/316 (1%) Frame = -1 Query: 1256 MAKKRKHSXXXXXXXXXXXXXXXPRPKRTLLGWKDKV--DVKPTNSA--FFRNKEKVLVT 1089 M KKRKHS RPKRTLLGWKD + K T S+ FRNKEKVLVT Sbjct: 1 MGKKRKHSEANVAEPPKKDSDAPERPKRTLLGWKDPTPTETKETESSSPIFRNKEKVLVT 60 Query: 1088 CSRRIIYRYRHLMLNVVSILPHCKKDNKIESKQSKGAALNEIVELRNCSSCLFFECRKQK 909 CSRRI YRYRHLML++VS+LPH KKDNK+ESK+SKGA LNE+VEL+NCSSCLFFECRKQK Sbjct: 61 CSRRISYRYRHLMLSIVSLLPHAKKDNKVESKESKGATLNELVELKNCSSCLFFECRKQK 120 Query: 908 DLYLWMAKCPNGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSASFDKDPHWKLLKEI 729 DLYLWMAKCP+GPSVKF+V+AVHTMEELKLTGNHLKGSRPLLTFS +FDKDPHWKLLKE+ Sbjct: 121 DLYLWMAKCPSGPSVKFMVDAVHTMEELKLTGNHLKGSRPLLTFSTNFDKDPHWKLLKEM 180 Query: 728 IMQIFGIPKDHRKAKPYHDHVFVFSIVDDHIWFRNYQISVPHNEADKVDRGGLDKMTLVE 549 I QIFG PK+HRKAKPYHDHVF FS+ DDHIWFRNYQISVPHNE+DKVDRGGLDK+TLVE Sbjct: 181 ITQIFGTPKEHRKAKPYHDHVFAFSLADDHIWFRNYQISVPHNESDKVDRGGLDKITLVE 240 Query: 548 VGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEXXXXXXXXXXXXXXXXXXKMHE 369 VGPRFCLNPIKIFGGSFGGPTLYENPFY+SPN+IRAL+ KMHE Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPFYISPNEIRALKKRKAAGKYAKKVKAKTRRKMHE 300 Query: 368 ETNTLEPDEFADLWKD 321 N LE DEFAD+WK+ Sbjct: 301 LENPLEADEFADMWKE 316 >ref|XP_003552625.1| PREDICTED: ribosome biogenesis protein BRX1-like [Glycine max] Length = 316 Score = 487 bits (1254), Expect = e-135 Identities = 237/316 (75%), Positives = 261/316 (82%), Gaps = 4/316 (1%) Frame = -1 Query: 1256 MAKKRKHSXXXXXXXXXXXXXXXP-RPKRTLLGWKDKVDVKPTNSA---FFRNKEKVLVT 1089 M KKRKHS P RP RTLLGWKDK V+ N+A FRNKEK+LVT Sbjct: 1 MGKKRKHSETTQSVAQPKKEDAAPERPARTLLGWKDKNQVEDNNNADSPIFRNKEKLLVT 60 Query: 1088 CSRRIIYRYRHLMLNVVSILPHCKKDNKIESKQSKGAALNEIVELRNCSSCLFFECRKQK 909 CSRRI YRYRHLMLN+V++LPHCKKDNK+ESK++KGA LNE+VEL+NCSSCLFFECRK K Sbjct: 61 CSRRINYRYRHLMLNLVTLLPHCKKDNKVESKETKGATLNELVELKNCSSCLFFECRKHK 120 Query: 908 DLYLWMAKCPNGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSASFDKDPHWKLLKEI 729 DLYLWMAKCPNGPSVKFLV+AVHTMEELKLTGNHL+GSRP+LTFSA+F+KD HWKLLKE+ Sbjct: 121 DLYLWMAKCPNGPSVKFLVSAVHTMEELKLTGNHLQGSRPILTFSANFEKDAHWKLLKEM 180 Query: 728 IMQIFGIPKDHRKAKPYHDHVFVFSIVDDHIWFRNYQISVPHNEADKVDRGGLDKMTLVE 549 ++QIF PKDHRKAKP+HDHVFVFSIVDDHIWFRNYQISV HNEADK+ RGGLDKMTL+E Sbjct: 181 LLQIFETPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVHHNEADKLPRGGLDKMTLIE 240 Query: 548 VGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEXXXXXXXXXXXXXXXXXXKMHE 369 VGPRFCLNPIKIFGGSFGGPTLYENP YVSPNQIRALE KMHE Sbjct: 241 VGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKKKAGKFAKKVKAKTRRKMHE 300 Query: 368 ETNTLEPDEFADLWKD 321 +N LEPDEFAD+WKD Sbjct: 301 MSNPLEPDEFADMWKD 316