BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007943
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu...    72   6e-11
ref|XP_002321124.1| glutamate-gated kainate-type ion channel rec...    69   4e-10
ref|XP_002321123.1| glutamate-gated kainate-type ion channel rec...    69   4e-10
gb|AAD47833.1|AF167355_1 ligand-gated channel-like protein precu...    67   1e-09
gb|AAB71458.1| Similar to Arabidopsis putative ion-channel PID:g...    67   1e-09

>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 938

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/49 (67%), Positives = 39/49 (79%)
 Frame = +2

Query: 338 PSIVNVGVLFTFNSTIGRVTMPAIRAAIDDVNSDPSILAGTRLNVIIQD 484
           PS+VN+G LFT NS IGR   PAI AA+ DVNSD SIL GT+LN+I+QD
Sbjct: 35  PSVVNIGALFTINSVIGRAAKPAIAAAVGDVNSDSSILPGTKLNLIVQD 83


>ref|XP_002321124.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222861897|gb|EEE99439.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 110

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +2

Query: 338 PSIVNVGVLFTFNSTIGRVTMPAIRAAIDDVNSDPSILAGTRLNVI 475
           PS+ N+G LFTF+S IGR   PAI AA+DDVNSDP++L GTRLN+I
Sbjct: 25  PSVANIGSLFTFDSVIGRAAGPAIAAAVDDVNSDPTVLPGTRLNLI 70


>ref|XP_002321123.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222861896|gb|EEE99438.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 927

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +2

Query: 338 PSIVNVGVLFTFNSTIGRVTMPAIRAAIDDVNSDPSILAGTRLNVI 475
           PS+ N+G LFTF+S IGR   PAI AA+DDVNSDP++L GTRLN+I
Sbjct: 25  PSVANIGSLFTFDSVIGRAAGPAIAAAVDDVNSDPTVLPGTRLNLI 70


>gb|AAD47833.1|AF167355_1 ligand-gated channel-like protein precursor [Arabidopsis thaliana]
          Length = 941

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +2

Query: 338 PSIVNVGVLFTFNSTIGRVTMPAIRAAIDDVNSDPSILAGTRLNVIIQD 484
           PS VNVG LFT++S IGR   PA++AA+DDVN+D S+L G +LN+I QD
Sbjct: 47  PSSVNVGALFTYDSFIGRAAKPAVKAAMDDVNADQSVLKGIKLNIIFQD 95


>gb|AAB71458.1| Similar to Arabidopsis putative ion-channel PID:g2262157
           (gb|AC002329) [Arabidopsis thaliana]
          Length = 962

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +2

Query: 338 PSIVNVGVLFTFNSTIGRVTMPAIRAAIDDVNSDPSILAGTRLNVIIQD 484
           PS VNVG LFT++S IGR   PA++AA+DDVN+D S+L G +LN+I QD
Sbjct: 47  PSSVNVGALFTYDSFIGRAAKPAVKAAMDDVNADQSVLKGIKLNIIFQD 95