BLASTX nr result

ID: Cimicifuga21_contig00007919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007919
         (1316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   380   e-103
ref|XP_004155361.1| PREDICTED: signal recognition particle recep...   377   e-102
ref|XP_004135257.1| PREDICTED: signal recognition particle recep...   376   e-102
ref|XP_003519824.1| PREDICTED: signal recognition particle recep...   372   e-100
gb|ADN33824.1| signal recognition particle receptor subunit beta...   371   e-100

>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
            [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
            protein product [Vitis vinifera]
          Length = 259

 Score =  380 bits (976), Expect = e-103
 Identities = 189/249 (75%), Positives = 210/249 (84%)
 Frame = -2

Query: 1075 QLQKWLHQADQRIREIPELQLYVAIGVXXXXXXXXXXXXXLKRTKSNTILLAGLSGSGKT 896
            QLQ+W  Q  +   ++PE QLY AI V              KRTKSNT++L GLSGSGKT
Sbjct: 10   QLQQWSRQGAEWFHQMPETQLYAAIAVVFVTTFFLLSIRLFKRTKSNTVVLTGLSGSGKT 69

Query: 895  VLFYQLRDGSSHQGTVTSMDPNEDTFVLHSESAKVGKVKPVHAIDVPGHSRLRTKLDDYL 716
             LFYQL+DGSSH GTVTSMDPNE TFVLHSE AK GK+KPVH +DVPGHSRLR KLD++L
Sbjct: 70   TLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVVDVPGHSRLRPKLDEFL 129

Query: 715  PQAAGLVFVVDALDFLPNCRAAAEYLYDILTKSSVVKKKIPVLILCNKTDKVTAHTKEFI 536
            PQAAG+VFVVDAL+FLPNCRAA+EYLYDILTKSSVVKKKIPVLILCNKTDKVTAHTKEFI
Sbjct: 130  PQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKKKIPVLILCNKTDKVTAHTKEFI 189

Query: 535  RKQLEKEIDKLRTSRTAISEADIANEFTLGVAGEPFSFSQCHNKVTVAESSGLTGEISQL 356
            RKQLEKEI+K R SR+AIS AD+ NEFTLGV GE F FSQCHNKVTVA++SGLTGEISQL
Sbjct: 190  RKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTVADASGLTGEISQL 249

Query: 355  EQFIREYVR 329
            E+FIREYV+
Sbjct: 250  EEFIREYVK 258


>ref|XP_004155361.1| PREDICTED: signal recognition particle receptor subunit beta-like
            [Cucumis sativus]
          Length = 266

 Score =  377 bits (969), Expect = e-102
 Identities = 186/254 (73%), Positives = 216/254 (85%)
 Frame = -2

Query: 1090 EELISQLQKWLHQADQRIREIPELQLYVAIGVXXXXXXXXXXXXXLKRTKSNTILLAGLS 911
            E+L  Q+++WL Q  Q + +IP +QLYV +GV              KR KSNTI+L+GLS
Sbjct: 12   EQLKVQMEQWLEQGLQFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVLSGLS 71

Query: 910  GSGKTVLFYQLRDGSSHQGTVTSMDPNEDTFVLHSESAKVGKVKPVHAIDVPGHSRLRTK 731
            GSGKT+LFYQLRDGSSHQGTVTSM+PNE TFVLHSE AK  K+KPVH +DVPGHSRLR K
Sbjct: 72   GSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK 131

Query: 730  LDDYLPQAAGLVFVVDALDFLPNCRAAAEYLYDILTKSSVVKKKIPVLILCNKTDKVTAH 551
            LDD+LPQAAG+VFVVDALDFLPNCRAA+EYLYDILT +SVVKKKIPVLILCNKTDKVTAH
Sbjct: 132  LDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAH 191

Query: 550  TKEFIRKQLEKEIDKLRTSRTAISEADIANEFTLGVAGEPFSFSQCHNKVTVAESSGLTG 371
            TKEFI +Q+EKEIDKLR SR+AIS ADIAN+FTLG+ G+ FSF+QCHNKV VAE+SGLTG
Sbjct: 192  TKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNKVAVAEASGLTG 251

Query: 370  EISQLEQFIREYVR 329
            E+S++EQFIRE V+
Sbjct: 252  EVSEVEQFIRENVK 265


>ref|XP_004135257.1| PREDICTED: signal recognition particle receptor subunit beta-like
            [Cucumis sativus]
          Length = 266

 Score =  376 bits (966), Expect = e-102
 Identities = 185/254 (72%), Positives = 216/254 (85%)
 Frame = -2

Query: 1090 EELISQLQKWLHQADQRIREIPELQLYVAIGVXXXXXXXXXXXXXLKRTKSNTILLAGLS 911
            E+L  Q+++WL Q  + + +IP +QLYV +GV              KR KSNTI+L+GLS
Sbjct: 12   EQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKSNTIVLSGLS 71

Query: 910  GSGKTVLFYQLRDGSSHQGTVTSMDPNEDTFVLHSESAKVGKVKPVHAIDVPGHSRLRTK 731
            GSGKT+LFYQLRDGSSHQGTVTSM+PNE TFVLHSE AK  K+KPVH +DVPGHSRLR K
Sbjct: 72   GSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK 131

Query: 730  LDDYLPQAAGLVFVVDALDFLPNCRAAAEYLYDILTKSSVVKKKIPVLILCNKTDKVTAH 551
            LDD+LPQAAG+VFVVDALDFLPNCRAA+EYLYDILT +SVVKKKIPVLILCNKTDKVTAH
Sbjct: 132  LDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAH 191

Query: 550  TKEFIRKQLEKEIDKLRTSRTAISEADIANEFTLGVAGEPFSFSQCHNKVTVAESSGLTG 371
            TKEFI +Q+EKEIDKLR SR+AIS ADIAN+FTLG+ G+ FSF+QCHNKV VAE+SGLTG
Sbjct: 192  TKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNKVAVAEASGLTG 251

Query: 370  EISQLEQFIREYVR 329
            E+S++EQFIRE V+
Sbjct: 252  EVSEVEQFIRENVK 265


>ref|XP_003519824.1| PREDICTED: signal recognition particle receptor subunit beta-like
            [Glycine max]
          Length = 259

 Score =  372 bits (955), Expect = e-100
 Identities = 185/258 (71%), Positives = 213/258 (82%)
 Frame = -2

Query: 1102 MAGTEELISQLQKWLHQADQRIREIPELQLYVAIGVXXXXXXXXXXXXXLKRTKSNTILL 923
            M   E+   QL  + + A  R+RE+P  QLY A  +              KR KSNTI+L
Sbjct: 1    MEELEQWKEQLSHFANLALDRLREVPPNQLYAAAAIAIFTTLLLLSIRLFKRAKSNTIVL 60

Query: 922  AGLSGSGKTVLFYQLRDGSSHQGTVTSMDPNEDTFVLHSESAKVGKVKPVHAIDVPGHSR 743
             GLSGSGKTVLFYQLRDGS+HQGTVTSM+PNE TF+LH+E  + GK+KPVH +DVPGHSR
Sbjct: 61   TGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHNEKTRKGKIKPVHVVDVPGHSR 120

Query: 742  LRTKLDDYLPQAAGLVFVVDALDFLPNCRAAAEYLYDILTKSSVVKKKIPVLILCNKTDK 563
            LR KLD+YLPQAAG+VFVVDALDFLPNCRAA+EYLYD+LTK SVV+KKIP+LILCNKTDK
Sbjct: 121  LRPKLDEYLPQAAGVVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPMLILCNKTDK 180

Query: 562  VTAHTKEFIRKQLEKEIDKLRTSRTAISEADIANEFTLGVAGEPFSFSQCHNKVTVAESS 383
            VTAHTKEFIRKQ+EKEIDKLR SR+AIS ADIANEFTLGV GEPFSF+QC NKVT A++S
Sbjct: 181  VTAHTKEFIRKQMEKEIDKLRASRSAISAADIANEFTLGVPGEPFSFTQCSNKVTTADAS 240

Query: 382  GLTGEISQLEQFIREYVR 329
            GLTGEISQLE+FIRE+V+
Sbjct: 241  GLTGEISQLEEFIREHVK 258


>gb|ADN33824.1| signal recognition particle receptor subunit beta [Cucumis melo
            subsp. melo]
          Length = 266

 Score =  371 bits (953), Expect = e-100
 Identities = 182/254 (71%), Positives = 216/254 (85%)
 Frame = -2

Query: 1090 EELISQLQKWLHQADQRIREIPELQLYVAIGVXXXXXXXXXXXXXLKRTKSNTILLAGLS 911
            E+L  Q+++WL +  + + +IP +QLYV +GV              KR KSNTI+L+GLS
Sbjct: 12   EQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRRKSNTIVLSGLS 71

Query: 910  GSGKTVLFYQLRDGSSHQGTVTSMDPNEDTFVLHSESAKVGKVKPVHAIDVPGHSRLRTK 731
            GSGKT+LFYQLRDGSSHQGTVTSM+PNE TFVLHSE AK  K+KPVH +DVPGHSRLR K
Sbjct: 72   GSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK 131

Query: 730  LDDYLPQAAGLVFVVDALDFLPNCRAAAEYLYDILTKSSVVKKKIPVLILCNKTDKVTAH 551
            LDD+LPQAAG+VFVVDALDFLPNCRAA+EYLYDILT +SVVKKKIPVLILCNKTDKVTAH
Sbjct: 132  LDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAH 191

Query: 550  TKEFIRKQLEKEIDKLRTSRTAISEADIANEFTLGVAGEPFSFSQCHNKVTVAESSGLTG 371
            TKEFI +Q+EKEIDKLR SR+AIS ADI+N+FTLG+ G+ FSF+QC+NKV VAE+SGLTG
Sbjct: 192  TKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNKVAVAEASGLTG 251

Query: 370  EISQLEQFIREYVR 329
            E+S++EQFIRE V+
Sbjct: 252  EVSEVEQFIRENVK 265


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