BLASTX nr result

ID: Cimicifuga21_contig00007911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007911
         (1630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein R...   470   e-130
emb|CBI40351.3| unnamed protein product [Vitis vinifera]              457   e-126
ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|2...   452   e-125
ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein R...   434   e-119
ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein R...   431   e-118

>ref|XP_002273879.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis vinifera]
          Length = 379

 Score =  470 bits (1210), Expect = e-130
 Identities = 236/365 (64%), Positives = 284/365 (77%), Gaps = 5/365 (1%)
 Frame = -1

Query: 1267 VGISCEGSVGK-NDAFYMRRCVEIAEKAIGCTSPNPMVGCVIVKDGVIVGEGFHPKAGQP 1091
            V + CE   GK +D FYMRRCVE+A KAIGCTSPNPMVGCVIVKDG +VGEGFHPKAGQP
Sbjct: 15   VSVRCEALQGKEDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFHPKAGQP 74

Query: 1090 HAEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVKRVVVGMVDPNPIVAS 911
            H EVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALI+AKVK+VV+GMVDPNPIVAS
Sbjct: 75   HGEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVAS 134

Query: 910  KGVERLRESGINVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYTLSVNGRLSDQLSEGA 731
            KGV+RLR++GI VTV VEEELCKKLNEAYIH+MLTGKPF+TLRY+LS+NG + DQL EG 
Sbjct: 135  KGVDRLRDAGIEVTVAVEEELCKKLNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGV 194

Query: 730  KESGGYYSQLLHEYDGVIYSSTAIIGK-SFPTSQEPQAKQPLQIIIARTPNSLVQLSHLT 554
            +E+GGYYSQL+ EYD +I S T +  K SFP SQEP A QPL I+IA++P S  Q+    
Sbjct: 195  EEAGGYYSQLVQEYDAIILSPTTVTEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPH 254

Query: 553  TEAASHAIILADRNIVMDPTLAQQGIETVILDQWHLNTILDYCAGRGLCSVLLDLQGGLG 374
            TEA S  II AD    ++P + Q+GIETV+LDQ +LN +L+YC  +GLCS+LLDL+G  G
Sbjct: 255  TEATSKVIIFADNETAVEPEMVQKGIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFG 314

Query: 373  DMKXXXXXXXXXXXLQKVVMEVLPLWDEGKQ---TIAFENLEKRVRRLEKLHSKASGDAI 203
              +           LQKVV+EVLP W   ++    +A +NL K + RL+ + S+ S D++
Sbjct: 315  YFEDLLKQSLEENLLQKVVVEVLPFWSTNEEEGLPLALKNLRKGI-RLKNITSRNSNDSV 373

Query: 202  VVHGY 188
            V+ GY
Sbjct: 374  VLEGY 378


>emb|CBI40351.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  457 bits (1175), Expect = e-126
 Identities = 228/348 (65%), Positives = 274/348 (78%), Gaps = 4/348 (1%)
 Frame = -1

Query: 1219 MRRCVEIAEKAIGCTSPNPMVGCVIVKDGVIVGEGFHPKAGQPHAEVFALRDAGDLAENA 1040
            MRRCVE+A KAIGCTSPNPMVGCVIVKDG +VGEGFHPKAGQPH EVFALRDAGDLAENA
Sbjct: 1    MRRCVELARKAIGCTSPNPMVGCVIVKDGKVVGEGFHPKAGQPHGEVFALRDAGDLAENA 60

Query: 1039 TAYVSLEPCNHYGRTPPCTEALIRAKVKRVVVGMVDPNPIVASKGVERLRESGINVTVGV 860
            TAYVSLEPCNHYGRTPPCTEALI+AKVK+VV+GMVDPNPIVASKGV+RLR++GI VTV V
Sbjct: 61   TAYVSLEPCNHYGRTPPCTEALIKAKVKKVVIGMVDPNPIVASKGVDRLRDAGIEVTVAV 120

Query: 859  EEELCKKLNEAYIHRMLTGKPFLTLRYTLSVNGRLSDQLSEGAKESGGYYSQLLHEYDGV 680
            EEELCKKLNEAYIH+MLTGKPF+TLRY+LS+NG + DQL EG +E+GGYYSQL+ EYD +
Sbjct: 121  EEELCKKLNEAYIHQMLTGKPFVTLRYSLSINGHILDQLGEGVEEAGGYYSQLVQEYDAI 180

Query: 679  IYSSTAIIGK-SFPTSQEPQAKQPLQIIIARTPNSLVQLSHLTTEAASHAIILADRNIVM 503
            I S T +  K SFP SQEP A QPL I+IA++P S  Q+    TEA S  II AD    +
Sbjct: 181  ILSPTTVTEKFSFPASQEPGANQPLHILIAKSPISPNQIPIPHTEATSKVIIFADNETAV 240

Query: 502  DPTLAQQGIETVILDQWHLNTILDYCAGRGLCSVLLDLQGGLGDMKXXXXXXXXXXXLQK 323
            +P + Q+GIETV+LDQ +LN +L+YC  +GLCS+LLDL+G  G  +           LQK
Sbjct: 241  EPEMVQKGIETVVLDQINLNAVLEYCKRQGLCSILLDLRGNFGYFEDLLKQSLEENLLQK 300

Query: 322  VVMEVLPLWDEGKQ---TIAFENLEKRVRRLEKLHSKASGDAIVVHGY 188
            VV+EVLP W   ++    +A +NL K + RL+ + S+ S D++V+ GY
Sbjct: 301  VVVEVLPFWSTNEEEGLPLALKNLRKGI-RLKNITSRNSNDSVVLEGY 347


>ref|XP_002302581.1| predicted protein [Populus trichocarpa] gi|222844307|gb|EEE81854.1|
            predicted protein [Populus trichocarpa]
          Length = 378

 Score =  452 bits (1164), Expect = e-125
 Identities = 228/367 (62%), Positives = 279/367 (76%), Gaps = 7/367 (1%)
 Frame = -1

Query: 1267 VGISCEGSVG----KNDAFYMRRCVEIAEKAIGCTSPNPMVGCVIVKDGVIVGEGFHPKA 1100
            V +SC    G    K+D FYMRRCVE+A KAIGCTSPNPMVGCVIVKDG IVGEGFHPKA
Sbjct: 11   VTVSCVAKEGGDDDKDDGFYMRRCVELARKAIGCTSPNPMVGCVIVKDGKIVGEGFHPKA 70

Query: 1099 GQPHAEVFALRDAGDLAENATAYVSLEPCNHYGRTPPCTEALIRAKVKRVVVGMVDPNPI 920
            GQPHAEVFALRDA DLAENATAYVSLEPCNHYGRTPPC+EAL++AKVK+VV+GM+DPNPI
Sbjct: 71   GQPHAEVFALRDAEDLAENATAYVSLEPCNHYGRTPPCSEALVKAKVKKVVIGMIDPNPI 130

Query: 919  VASKGVERLRESGINVTVGVEEELCKKLNEAYIHRMLTGKPFLTLRYTLSVNGRLSDQLS 740
            VAS+GV+RLR++GINV VGVEEELCK+LNEA+IH+MLTG PF+TLRY+LSVNG L +QL 
Sbjct: 131  VASRGVQRLRDAGINVVVGVEEELCKRLNEAFIHKMLTGSPFVTLRYSLSVNGHLVNQLG 190

Query: 739  EGAKESGGYYSQLLHEYDGVIYSSTAIIGKSFPTSQEPQAKQPLQIIIARTPNSLVQLSH 560
            EG  ++GGYYSQLL EYD VI S++      FP SQEP A QPL I++A  P+S +Q+  
Sbjct: 191  EGVTDTGGYYSQLLQEYDAVILSASLTGSSPFPASQEPGANQPLWILMAGGPSSPIQIPL 250

Query: 559  LTTEAASHAIILADRNIVMDPTLAQQGIETVILDQWHLNTILDYCAGRGLCSVLLDLQGG 380
            LT EAAS   I  D+    +P  +++GIETV+LD+ +LN IL+YC  RGLCSVL+DL+G 
Sbjct: 251  LTEEAASKVTIFTDKEASEEPETSKKGIETVVLDKINLNAILEYCKSRGLCSVLMDLRGS 310

Query: 379  LGDMKXXXXXXXXXXXLQKVVMEVLPLWDE--GKQTIAFENLEKRVRRLEKLHSKASGD- 209
              +++           LQK+V+EVLP WDE  G  ++      +R  ++  L  K SGD 
Sbjct: 311  FVELEELLKDGTEQNLLQKIVVEVLPFWDESSGLSSLTASKSIRRRLKVNNLQPKISGDQ 370

Query: 208  AIVVHGY 188
            +IV+ GY
Sbjct: 371  SIVLEGY 377


>ref|XP_003529946.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
          Length = 424

 Score =  434 bits (1117), Expect = e-119
 Identities = 228/405 (56%), Positives = 278/405 (68%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1378 SYAKFVSNSKSKFGF-CSFHKRVSESPIVMRNHRNSDSVGISCEGSVGKND---AFYMRR 1211
            ++A F+S SK      C  HK +  S          D + + C GS G+ND    FY+RR
Sbjct: 26   NFASFLSPSKVAIKLSCGIHKPICRS--------RCDGLRVQCAGSNGENDDDDGFYIRR 77

Query: 1210 CVEIAEKAIGCTSPNPMVGCVIVKDGVIVGEGFHPKAGQPHAEVFALRDAGDLAENATAY 1031
            CVE+A KA+G TSPNP+VGCVIVKDG +VG+GFHPKAGQPHAEVFALRDAGDLA++ATAY
Sbjct: 78   CVELARKAVGFTSPNPLVGCVIVKDGKVVGQGFHPKAGQPHAEVFALRDAGDLAQSATAY 137

Query: 1030 VSLEPCNHYGRTPPCTEALIRAKVKRVVVGMVDPNPIVASKGVERLRESGINVTVGVEEE 851
            VSLEPCNH+GRTPPCTEALI+AKVK+VVVGMVDPNPIVA KGVERLR++GI V VGVEEE
Sbjct: 138  VSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPIVAFKGVERLRDAGIEVVVGVEEE 197

Query: 850  LCKKLNEAYIHRMLTGKPFLTLRYTLSVNGRLSDQLSEGAKESGGYYSQLLHEYDGVIYS 671
            LCK LNE YIHRMLTGKPFLTLRY+LSVNG   D L +G  + GGYYS+LL EYD V+ S
Sbjct: 198  LCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFMDLLGDGVTDCGGYYSRLLQEYDAVVIS 257

Query: 670  STAII-GKSFPTSQEPQAKQPLQIIIARTPNSLVQLSHLTTEAASHAIILADRNIVMDPT 494
            S+      S P SQEP A QP++II+ + P+S  Q+           II  D   V  P 
Sbjct: 258  SSLFSENLSVPASQEPGANQPIRIILHKDPSSSNQIPLAINGVTHKVIIFTDNKTVTAPE 317

Query: 493  LAQQGIETVILDQWHLNTILDYCAGRGLCSVLLDLQGGLGDMKXXXXXXXXXXXLQKVVM 314
            +AQQGIETV LDQ +L+ ILDYC  +GLCSVLLD++G  G+ +           + K V 
Sbjct: 318  VAQQGIETVALDQINLDVILDYCNRQGLCSVLLDIRGSFGEFEDLVKEGIKKNYINKFVT 377

Query: 313  EVLPLWDEGKQTIAFENLEKRVRRLE--KLHSKASGDAIVVHGYF 185
            E+LP+W+   +      L+   +  E   L SKAS  ++V+ GYF
Sbjct: 378  EILPVWNGHTEPDPLHTLKSLEQGAEVVNLKSKASDKSVVIEGYF 422


>ref|XP_003521898.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Glycine max]
          Length = 425

 Score =  431 bits (1109), Expect = e-118
 Identities = 228/405 (56%), Positives = 277/405 (68%), Gaps = 7/405 (1%)
 Frame = -1

Query: 1378 SYAKFVSNSKSKFGF-CSFHKRVSESPIVMRNHRNSDSVGISCEGSVGKND---AFYMRR 1211
            ++A F+S SK+     C  HK V  S          D + + C  S G+ND    FY+RR
Sbjct: 27   NFASFLSPSKAGIKLSCGIHKPVWRS--------RCDGLRVQCAASNGENDDDDGFYIRR 78

Query: 1210 CVEIAEKAIGCTSPNPMVGCVIVKDGVIVGEGFHPKAGQPHAEVFALRDAGDLAENATAY 1031
            CVE+A KA+G TSPNP+VGCVIVKDG +VGEGFHPKAGQPHAEVFALRDAGDLA++ATAY
Sbjct: 79   CVELARKAVGFTSPNPLVGCVIVKDGKVVGEGFHPKAGQPHAEVFALRDAGDLAQSATAY 138

Query: 1030 VSLEPCNHYGRTPPCTEALIRAKVKRVVVGMVDPNPIVASKGVERLRESGINVTVGVEEE 851
            VSLEPCNH+GRTPPCTEALI+AKVK+VVVGMVDPNPIVA KGVERLR++GI V VGVEEE
Sbjct: 139  VSLEPCNHFGRTPPCTEALIKAKVKKVVVGMVDPNPIVAFKGVERLRDAGIEVIVGVEEE 198

Query: 850  LCKKLNEAYIHRMLTGKPFLTLRYTLSVNGRLSDQLSEGAKESGGYYSQLLHEYDGVIYS 671
            LCK LNE YIHRMLTGKPFLTLRY+LSVNG   D L  G  + GGY+S+LL EYD V+ S
Sbjct: 199  LCKSLNEPYIHRMLTGKPFLTLRYSLSVNGNFLDLLGNGVTDCGGYHSRLLQEYDAVVIS 258

Query: 670  STAII-GKSFPTSQEPQAKQPLQIIIARTPNSLVQLSHLTTEAASHAIILADRNIVMDPT 494
            S+      S P SQEP A QP++III + P S  Q+           II  D   V  P 
Sbjct: 259  SSLFSENLSVPASQEPGANQPIRIIIHKDPGSSKQIQLAINGVTGKVIIFTDNKTVTAPE 318

Query: 493  LAQQGIETVILDQWHLNTILDYCAGRGLCSVLLDLQGGLGDMKXXXXXXXXXXXLQKVVM 314
            +AQQGIE V+LDQ +L+ ILDYC  +GLCSVLLD++G  G+ +           + K V 
Sbjct: 319  VAQQGIEIVVLDQINLDVILDYCNCQGLCSVLLDIRGSFGEFEELVKEGIKKNYINKFVT 378

Query: 313  EVLPLWDEGKQTIAFENLEKRVRRLE--KLHSKASGDAIVVHGYF 185
            E+LP+WD   +    + L+   + L+   L S AS  ++V+ GYF
Sbjct: 379  EILPVWDGLAEPDPLQTLKSSEQGLKVVNLKSMASDQSVVIEGYF 423


Top