BLASTX nr result

ID: Cimicifuga21_contig00007858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007858
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC87836.1| RB-like protein, partial [Solanum avilesii]             95   3e-22
gb|AFC87872.1| RB-like protein, partial [Solanum demissum]             94   4e-22
gb|AEK82096.1| blight resistance protein [Solanum demissum]            94   4e-22
gb|AFC87869.1| RB-like protein, partial [Solanum demissum] gi|37...    87   5e-22
gb|AEK82093.1| blight resistance protein [Solanum demissum]            87   5e-22

>gb|AFC87836.1| RB-like protein, partial [Solanum avilesii]
          Length = 183

 Score = 94.7 bits (234), Expect(2) = 3e-22
 Identities = 47/85 (55%), Positives = 60/85 (70%)
 Frame = -3

Query: 541 VIFDNLRSLIDKELRLLRGVNKDLVKLSSTLSTIRDVLEDAEEKQIKDKPTRNWLQKLKD 362
           V+ DNL S I +EL LL G   +  KL ST STI+ V+EDA+EKQ+KDKP  NWL KL  
Sbjct: 8   VLLDNLTSFIQEELGLLFGFENEFKKLLSTFSTIQIVIEDAQEKQLKDKPLENWLHKLNV 67

Query: 361 AAYDAEDILEECELEALQLDSEDIG 287
           AAY+A+DIL+EC+ EA +L    +G
Sbjct: 68  AAYEADDILDECKTEAARLKQSRLG 92



 Score = 36.2 bits (82), Expect(2) = 3e-22
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -2

Query: 236 FQTKMGKKVKDIREKFDEIAAERSKFHL 153
           F+ K+GK++K++ EK D IA ER+ FHL
Sbjct: 101 FRHKIGKRMKEMMEKLDAIAKERADFHL 128


>gb|AFC87872.1| RB-like protein, partial [Solanum demissum]
          Length = 183

 Score = 93.6 bits (231), Expect(2) = 4e-22
 Identities = 46/85 (54%), Positives = 60/85 (70%)
 Frame = -3

Query: 541 VIFDNLRSLIDKELRLLRGVNKDLVKLSSTLSTIRDVLEDAEEKQIKDKPTRNWLQKLKD 362
           V+ DNL S I +E+ LL G   +  KL ST STI+ V+EDA+EKQ+KDKP  NWL KL  
Sbjct: 8   VLLDNLTSFIQEEVGLLFGFENEFKKLLSTFSTIQIVIEDAQEKQLKDKPLENWLHKLNV 67

Query: 361 AAYDAEDILEECELEALQLDSEDIG 287
           AAY+A+DIL+EC+ EA +L    +G
Sbjct: 68  AAYEADDILDECKTEAARLKQSRLG 92



 Score = 37.0 bits (84), Expect(2) = 4e-22
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 236 FQTKMGKKVKDIREKFDEIAAERSKFHLSRGV 141
           F+ K+GK++K++ EK D IA ER+ FHL   +
Sbjct: 101 FRLKIGKRMKEMMEKLDAIAKERAYFHLRENI 132


>gb|AEK82096.1| blight resistance protein [Solanum demissum]
          Length = 181

 Score = 93.6 bits (231), Expect(2) = 4e-22
 Identities = 46/85 (54%), Positives = 60/85 (70%)
 Frame = -3

Query: 541 VIFDNLRSLIDKELRLLRGVNKDLVKLSSTLSTIRDVLEDAEEKQIKDKPTRNWLQKLKD 362
           V+ DNL S I +E+ LL G   +  KL ST STI+ V+EDA+EKQ+KDKP  NWL KL  
Sbjct: 8   VLLDNLTSFIQEEVGLLFGFENEFKKLLSTFSTIQIVIEDAQEKQLKDKPLENWLHKLNV 67

Query: 361 AAYDAEDILEECELEALQLDSEDIG 287
           AAY+A+DIL+EC+ EA +L    +G
Sbjct: 68  AAYEADDILDECKTEAARLKQSRLG 92



 Score = 37.0 bits (84), Expect(2) = 4e-22
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 236 FQTKMGKKVKDIREKFDEIAAERSKFHLSRGV 141
           F+ K+GK++K++ EK D IA ER+ FHL   +
Sbjct: 101 FRLKIGKRMKEMMEKLDAIAKERAYFHLRENI 132


>gb|AFC87869.1| RB-like protein, partial [Solanum demissum]
           gi|379046128|gb|AFC87874.1| RB-like protein, partial
           [Solanum hjertingii]
          Length = 183

 Score = 87.4 bits (215), Expect(2) = 5e-22
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = -3

Query: 541 VIFDNLRSLIDKELRLLRGVNKDLVKLSSTLSTIRDVLEDAEEKQIKDKPTRNWLQKLKD 362
           V+ DNL S I  EL L  G   +   L S  +TI+DVLEDA+EKQ+KDKP  NWL KL  
Sbjct: 8   VLLDNLTSFIQGELGLFFGFKDEFENLKSAFTTIQDVLEDAQEKQLKDKPLENWLHKLNV 67

Query: 361 AAYDAEDILEECELEALQLDSEDIG 287
           AAY+ +DIL+EC+ +A +L     G
Sbjct: 68  AAYEVDDILDECKSKAAKLSQTKYG 92



 Score = 42.7 bits (99), Expect(2) = 5e-22
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -2

Query: 236 FQTKMGKKVKDIREKFDEIAAERSKFHL-SRGVAPSGAVEEVG 111
           F+ K+GK++K++ EK D IAAERSKFHL  R +    A  E G
Sbjct: 101 FRYKIGKRMKEMMEKLDAIAAERSKFHLEKRTIEREAARRETG 143


>gb|AEK82093.1| blight resistance protein [Solanum demissum]
          Length = 181

 Score = 87.4 bits (215), Expect(2) = 5e-22
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = -3

Query: 541 VIFDNLRSLIDKELRLLRGVNKDLVKLSSTLSTIRDVLEDAEEKQIKDKPTRNWLQKLKD 362
           V+ DNL S I  EL L  G   +   L S  +TI+DVLEDA+EKQ+KDKP  NWL KL  
Sbjct: 8   VLLDNLTSFIQGELGLFFGFKDEFENLKSAFTTIQDVLEDAQEKQLKDKPLENWLHKLNV 67

Query: 361 AAYDAEDILEECELEALQLDSEDIG 287
           AAY+ +DIL+EC+ +A +L     G
Sbjct: 68  AAYEVDDILDECKSKAAKLSQTKYG 92



 Score = 42.7 bits (99), Expect(2) = 5e-22
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
 Frame = -2

Query: 236 FQTKMGKKVKDIREKFDEIAAERSKFHL-SRGVAPSGAVEEVG 111
           F+ K+GK++K++ EK D IAAERSKFHL  R +    A  E G
Sbjct: 101 FRYKIGKRMKEMMEKLDAIAAERSKFHLEKRTIEREAARRETG 143


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