BLASTX nr result

ID: Cimicifuga21_contig00007853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007853
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04345.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   5e-08
ref|XP_002330307.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|2...    64   5e-08
emb|CAN82368.1| hypothetical protein VITISV_027619 [Vitis vinifera]    64   7e-08
ref|XP_002533342.1| DNA binding protein, putative [Ricinus commu...    63   1e-07

>dbj|BAK04345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 710

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 13/121 (10%)
 Frame = -3

Query: 732 LSKREKR-ALEVDPGFTSNYPWFAVPIVKSHKHQ-------LILPFKFVKEYLPKESMNA 577
           +++R+K  A+E    F S  P+     VK+ KH        +I+P KFVK +LPKESM  
Sbjct: 573 VTQRDKEYAMERALWFKSERPF----TVKTMKHNDVYASYFMIIPAKFVKTFLPKESMKM 628

Query: 576 EIVDSNETTWTVDYKYKKG----RSLLYTGWNSFWLSKELKEGDVCAFELIDKD-KIKLK 412
            + D     W V Y+Y  G    R+    GW +  +   L++ DVC FEL+D++  IKL 
Sbjct: 629 TLWDPQAKPWKVWYEYYGGGECPRAAFSAGWGALAMENNLEKWDVCVFELLDQEYNIKLH 688

Query: 411 V 409
           V
Sbjct: 689 V 689


>ref|XP_002330307.1| predicted protein [Populus trichocarpa] gi|222871342|gb|EEF08473.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
 Frame = -3

Query: 762 KCGEEG-----GTYKLSKREKRALEVDPGFTSNYPWFAVPIVKSHKHQLILPFKFVKEYL 598
           +CGE+      G  K S+  K+A+     F    P F V +   +K  + +P +F K +L
Sbjct: 271 RCGEDTDIIVCGFAKASEESKKAIHAARMFRPKNPSFMVLLRSYNKCFVAVPAEFSKRHL 330

Query: 597 PKESMNAEIVDSNETTWTVDY-KYKKGRSLLYTGWNSFWLSKELKEGDVCAFELIDKDKI 421
              S + ++  S+   W +   K ++ R ++  GWN F     LKEGDVC FELI   K 
Sbjct: 331 SGVSEHIKLQVSDGRQWPLRLNKTQRARMIISRGWNEFKRENNLKEGDVCVFELIKNKKF 390

Query: 420 KLKVTIRKKSD 388
            L+V++ +  D
Sbjct: 391 SLQVSMFRAVD 401


>ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|222864208|gb|EEF01339.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
 Frame = -3

Query: 744 GTYKLSKREKRALEVDPGFTSNYPWFAVPIVKS--HKHQLILPFKFVKEYLPKESMNAEI 571
           G  K S++ KRA+     F    P F V + +   + H L +P +F + +L       ++
Sbjct: 214 GFAKASEKSKRAIHAARMFKPKSPSFMVMLRRYNFYNHFLYVPLEFAQRHLSDAPRCIKL 273

Query: 570 VDSNETTWTVDYKYKKGRSL-LYTGWNSFWLSKELKEGDVCAFELIDKDKIKLKVTI 403
             S+   W +     + R L +  GWN F     LKEGDVC FELI+K+K  LKV I
Sbjct: 274 QVSDGREWPIQINRNQCRYLSISKGWNEFSQENNLKEGDVCVFELINKEKFVLKVAI 330


>emb|CAN82368.1| hypothetical protein VITISV_027619 [Vitis vinifera]
          Length = 641

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -3

Query: 762 KCGEEGGTYKLSKREKRALEVDPGFTSNYPWFAVPIVKSHKHQLI-LPFKFVKEYLPKES 586
           +CG      ++    +     +P FT         I+K +K++L+ +P +F ++YL ++S
Sbjct: 210 RCGRTKSRERIIHAARMLKPANPSFTI--------IMKPYKNRLLYVPTEFGRKYLKRKS 261

Query: 585 MNAEIVDSNETTWTVDYKYKKGRSL-LYTGWNSFWLSKELKEGDVCAFELIDKDKIKLK 412
           +  E  DS    W +   +  GR++ L  GWN F   K LKEGDVC FEL+ ++ + LK
Sbjct: 262 IKLE--DSTGRQWLLSCLFNGGRNIRLSKGWNEFVEEKNLKEGDVCVFELVQREDVVLK 318


>ref|XP_002533342.1| DNA binding protein, putative [Ricinus communis]
           gi|223526822|gb|EEF29041.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 212

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = -3

Query: 717 KRALEVDPGFTSNYPWFAVPIVKSHKHQ---LILPFKFVKEYLPKESMNAEIVDSNETTW 547
           K A E      S  P F   +V+SH +    L LP +F K +LPK+ ++  + D N +T+
Sbjct: 96  KAAEEFQNSLQSGNPSFVKSMVRSHVYSCFWLGLPTQFCKNHLPKKDLDMILEDDNGSTY 155

Query: 546 TVDYKYKKGRSLLYTGWNSFWLSKELKEGDVCAFELIDKDKIK 418
             D KY   R+ L  GW  F L  +L +GD   FEL++ DK K
Sbjct: 156 --DAKYLGNRTGLSGGWRGFALDHKLDDGDAVVFELVEPDKFK 196


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