BLASTX nr result
ID: Cimicifuga21_contig00007832
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007832
(1798 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin... 315 2e-83
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin... 312 2e-82
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin... 309 1e-81
gb|ADN33972.1| nucleic acid binding protein [Cucumis melo subsp.... 303 1e-79
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin... 300 6e-79
>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
protein product [Vitis vinifera]
Length = 484
Score = 315 bits (808), Expect = 2e-83
Identities = 184/471 (39%), Positives = 249/471 (52%), Gaps = 18/471 (3%)
Frame = -1
Query: 1729 VEEVEEVRDGWTVEENENQDGWRPVEENGWTTVEEVNEIRYGWTLEENGNQDGWKSVEEV 1550
+E+ E V + +E++E PV E+ +E+ + LEE + +
Sbjct: 42 LEQHEPVVESLALEQHE------PVVES--LALEQHEPVVESLALEEREEEKEEDEESDS 93
Query: 1549 SGIQEGWTVEENGYR--EGETVEGKEKDKKSQYPSRPGELDCAFYIKTGTCGFGSNCKFN 1376
+G + EE E E+ +K + QYP RP +DC+FY++TGTC FGSNCKFN
Sbjct: 94 NGEVKASDDEEEQCENLEDESAAKDDKSARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFN 153
Query: 1375 HPLRXXXXXXXXXXXXXXXXXXXXXXXXKAENPKRVGRLECKYYLSPGGCKFGKACRYHH 1196
HP+R E P+R G+ ECKYYL GGCKFGKACRY+H
Sbjct: 154 HPIRRKNQVAKEKVKEKEKE----------EFPERPGQTECKYYLRTGGCKFGKACRYNH 203
Query: 1195 PREKIVVEPPAEFNFLGLPIRPGARECPFYMRTGSCKFATNCRFHHPDPTA---XXXXXX 1025
+ K P E NFLGLPIR G +ECP+YMRTGSCK+ NCRF+HPDPTA
Sbjct: 204 TKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSG 263
Query: 1024 XXXXXSIPLHASSDSQPAVASWSIPQPSIDTVPYSDSSRSYMPVMLQP-QGVVHSGPEWN 848
S+PL +S S +ASWS P+ + P ++P+M P QGV PEWN
Sbjct: 264 YGNGGSVPLQGASQSN--MASWSSPRALNEPAP-------FVPIMFSPTQGVPPPNPEWN 314
Query: 847 GYQAPGSP-------IYQPMASSLNGSNKNLDGYSHHLQQQMP-VDEFPERPGQKECQYY 692
GYQAP P ++ P A +N + + + Y HH QQQ +++FPERPGQ EC Y+
Sbjct: 315 GYQAPLYPPPPPERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYF 374
Query: 691 MNTGNCKYKSTCRFHHPKTRY--XXXXXXXXXXXXLRPDQIVCTHYSRFGICKYGAACKY 518
+ TG+CK+++ C++HHPK R LRPDQ +CTHY+R+GICK+G ACK+
Sbjct: 375 LKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKF 434
Query: 517 DH--TXXXXXXXXXXXXXXXPHPYYQNSATYGGSNMVGYGDGSKSLVQQYV 371
DH P + S T G G G+G++ L+QQ V
Sbjct: 435 DHPVNYGNSASAPSAESGQDQPPPFGGSVTADGVR-PGSGNGNEILIQQPV 484
>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 312 bits (799), Expect = 2e-82
Identities = 186/466 (39%), Positives = 239/466 (51%), Gaps = 14/466 (3%)
Frame = -1
Query: 1726 EEVEEVRDGWTV--EENENQDGWRPVEENGWTTVEEVNEIRYGWTLEENGNQDGWKSVEE 1553
E+V + DG V EE DG + GW T E+ ++ +G+ DG ++
Sbjct: 63 EKVSDFNDGGGVCDEETGKGDG----DSKGWETNSWNEEVGVDVDVDGDGDGDG---DDD 115
Query: 1552 VSGIQEGWTVEENGYREGETVEGKEKDKKSQYPSRPGELDCAFYIKTGTCGFGSNCKFNH 1373
V G + +G E E EG+ YP RP DCAFY+KTG C FG NCKFNH
Sbjct: 116 VDG-------DVDGDDEVEKKEGRNSGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNH 168
Query: 1372 PLRXXXXXXXXXXXXXXXXXXXXXXXXKAENPKRVGRLECKYYLSPGGCKFGKACRYHHP 1193
P++ E +R G ECKYY GGCKFGK+C+Y+H
Sbjct: 169 PIKRKSQAVKEKAGERE------------ETTERSGMTECKYYQRSGGCKFGKSCKYNHT 216
Query: 1192 REKIVVEPPA--EFNFLGLPIRPGARECPFYMRTGSCKFATNCRFHHPDPTA---XXXXX 1028
R KI P E NFLGLPIRPG RECP+YMRTGSCKF NC+F+HPDPTA
Sbjct: 217 RGKISTAPAPLLELNFLGLPIRPGERECPYYMRTGSCKFGANCKFNHPDPTAVGGGGGNP 276
Query: 1027 XXXXXXSIPLHASSDSQPAVASWSIPQPSIDTVPYSDSSRSYMPVMLQP-QGVVHSGPEW 851
+ SQ +V SWS P+ + P ++P+ML P QGV +W
Sbjct: 277 PSGYGNGGSISLQGVSQTSVPSWSSPRTLNEASP-------FVPMMLSPTQGVSTQSSDW 329
Query: 850 NGYQA----PGSPIYQPMASSLNGSNKNLDGYSHHLQQQMPVDEFPERPGQKECQYYMNT 683
NGYQA P I+ P +N + + Y HH Q+QMPVDEFPERPG+ EC +++ T
Sbjct: 330 NGYQASVYLPERSIHPPSTFVMNNPAIDTNVYMHH-QKQMPVDEFPERPGEPECSFFLKT 388
Query: 682 GNCKYKSTCRFHHPKTRY--XXXXXXXXXXXXLRPDQIVCTHYSRFGICKYGAACKYDHT 509
G+CK+KS C+FHHPK R LRPDQ VC+HYSR+GICK+G ACK+DH
Sbjct: 389 GDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDH- 447
Query: 508 XXXXXXXXXXXXXXXPHPYYQNSATYGGSNMVGYGDGSKSLVQQYV 371
Y NSA+ G + + G + + +QQ V
Sbjct: 448 ---PINLQPVMIPGLEQQSYSNSASAGVAGIGGSTGVTDATIQQSV 490
>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 309 bits (792), Expect = 1e-81
Identities = 181/468 (38%), Positives = 246/468 (52%), Gaps = 15/468 (3%)
Frame = -1
Query: 1729 VEEVEEVRDGWTVEENENQDGWRPVEENGWTTVEEVNEIRYGWTLEENGNQDGWKSVEEV 1550
+E+ E V + +E++E PV E+ +E+ + LEE + +
Sbjct: 42 LEQHEPVVESLALEQHE------PVVES--LALEQHEPVVESLALEEREEEKEEDEESDS 93
Query: 1549 SGIQEGWTVEENGYR--EGETVEGKEKDKKSQYPSRPGELDCAFYIKTGTCGFGSNCKFN 1376
+G + EE E E+ +K + QYP RP +DC+FY++TGTC FGSNCKFN
Sbjct: 94 NGEVKASDDEEEQCENLEDESAAKDDKSARFQYPVRPDAVDCSFYLRTGTCKFGSNCKFN 153
Query: 1375 HPLRXXXXXXXXXXXXXXXXXXXXXXXXKAENPKRVGRLECKYYLSPGGCKFGKACRYHH 1196
HP+R E P+R G+ ECKYYL GGCKFGKACRY+H
Sbjct: 154 HPIRRKNQVAKEKVKEKEKE----------EFPERPGQTECKYYLRTGGCKFGKACRYNH 203
Query: 1195 PREKIVVEPPAEFNFLGLPIRPGARECPFYMRTGSCKFATNCRFHHPDPTA---XXXXXX 1025
+ K P E NFLGLPIR G +ECP+YMRTGSCK+ NCRF+HPDPTA
Sbjct: 204 TKAKPSAVPVLELNFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSG 263
Query: 1024 XXXXXSIPLHASSDSQPAVASWSIPQPSIDTVPYSDSSRSYMPVMLQP-QGVVHSGPEWN 848
S+PL +S S +ASWS P+ + P ++P+M P QGV PEWN
Sbjct: 264 YGNGGSVPLQGASQSN--MASWSSPRALNEPAP-------FVPIMFSPTQGVPPPNPEWN 314
Query: 847 GYQA----PGSPIYQPMASSLNGSNKNLDGYSHHLQQQMP-VDEFPERPGQKECQYYMNT 683
GYQ ++ P A +N + + + Y HH QQQ +++FPERPGQ EC Y++ T
Sbjct: 315 GYQVFMLLLKRSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKT 374
Query: 682 GNCKYKSTCRFHHPKTRY--XXXXXXXXXXXXLRPDQIVCTHYSRFGICKYGAACKYDH- 512
G+CK+++ C++HHPK R LRPDQ +CTHY+R+GICK+G ACK+DH
Sbjct: 375 GDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHP 434
Query: 511 -TXXXXXXXXXXXXXXXPHPYYQNSATYGGSNMVGYGDGSKSLVQQYV 371
P + S T G G G+G++ L+QQ V
Sbjct: 435 VNYGNSASAPSAESGQDQPPPFGGSVTADGVR-PGSGNGNEILIQQPV 481
>gb|ADN33972.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 475
Score = 303 bits (775), Expect = 1e-79
Identities = 175/459 (38%), Positives = 234/459 (50%), Gaps = 9/459 (1%)
Frame = -1
Query: 1726 EEVEEVRDG--WTVEENENQDGWRPVEENGWTTVEEVNEIRYGWTLEENGNQDGWKSVEE 1553
E V++ DG W VE+N +D E N ++E + R +++G D + V+
Sbjct: 61 EPVKDFDDGGEWEVEKNPYED-----EGNDTKKIDENDRDRSVRNDDDDGYDDVDEEVDA 115
Query: 1552 VSGIQEGWTVEENGYREGETVEGKEKDKKSQYPSRPGELDCAFYIKTGTCGFGSNCKFNH 1373
G +G VE G G K +QYP RP DCAFY+KTGTC FGS CKFNH
Sbjct: 116 GDGDGDGGEVERKGDWRG---------KSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNH 166
Query: 1372 PLRXXXXXXXXXXXXXXXXXXXXXXXXKAENPKRVGRLECKYYLSPGGCKFGKACRYHHP 1193
P+R ++ + ECK+YL GGCKFG ACRY+H
Sbjct: 167 PVRKKNQVVSEKLKYDD------------DSAGTANKTECKFYLRTGGCKFGNACRYNHT 214
Query: 1192 REKIVVEPPAEFNFLGLPIRPGARECPFYMRTGSCKFATNCRFHHPDP-TAXXXXXXXXX 1016
R + + P E NFLGLPIRP +ECP+YMRTGSCK+ NC+F+HPDP T
Sbjct: 215 RSRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGY 274
Query: 1015 XXSIPLHASSDSQPAVASWSIPQPSIDTVPYSDSSRSYMPVMLQPQGVVHSGPEWNGYQA 836
+PL +S SQ + SW+ P+ + + +++P M+ P EWNGYQA
Sbjct: 275 NNGVPLQGASQSQ--ITSWTSPR-------VLNEATTFVPAMISPS----QDSEWNGYQA 321
Query: 835 PGSP----IYQPMASSLNGSNKNLDGYSHHLQQQMPVDEFPERPGQKECQYYMNTGNCKY 668
P P + P +N D YS H Q VDE+PERPGQ EC Y++ TG+CK+
Sbjct: 322 PIYPSEISVLPPPPYVVNNIAPEADLYSSHQQ----VDEYPERPGQPECSYFLKTGDCKF 377
Query: 667 KSTCRFHHPKTR--YXXXXXXXXXXXXLRPDQIVCTHYSRFGICKYGAACKYDHTXXXXX 494
KS C++HHPK R LRPDQ VCT+YSR+GICK+G +CK+DH
Sbjct: 378 KSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDH---PFL 434
Query: 493 XXXXXXXXXXPHPYYQNSATYGGSNMVGYGDGSKSLVQQ 377
P+Y N + G+ M G G+ + V+Q
Sbjct: 435 PTSSTVGELEQQPHYGNFSAAEGAEMAGGASGNSATVEQ 473
>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 501
Score = 300 bits (769), Expect = 6e-79
Identities = 176/420 (41%), Positives = 223/420 (53%), Gaps = 15/420 (3%)
Frame = -1
Query: 1726 EEVEEVRDGWTV--EENENQDGWRPVEENGWTTVEEVNEIRYGWTLEENGNQDGWKSVE- 1556
E V ++ DG V EE DG + GW T E+ + G+ D + +
Sbjct: 63 ERVSDLNDGRGVCDEETGKPDG----DSRGWETNSWNEEVGVDAEVHVFGDGDVHDAGDG 118
Query: 1555 EVSGIQEGWTVEENGYREGETVEGKEKDKKSQYPSRPGELDCAFYIKTGTCGFGSNCKFN 1376
+V + +G V+ + E E EG YP RP DCAFYIKTG C FG NCKFN
Sbjct: 119 DVHDVGDG-DVDVDVDDEVEKKEGGNSGLAQHYPLRPEAEDCAFYIKTGNCKFGFNCKFN 177
Query: 1375 HPLRXXXXXXXXXXXXXXXXXXXXXXXXKAENPKRVGRLECKYYLSPGGCKFGKACRYHH 1196
HP+R E +R G ECKYY GGCKFGK+C+Y+H
Sbjct: 178 HPIRRKSQAVKEKAGERE------------ETTERSGMTECKYYQRSGGCKFGKSCKYNH 225
Query: 1195 PREKIVVEPPA--EFNFLGLPIRPGARECPFYMRTGSCKFATNCRFHHPDPTA---XXXX 1031
R KI P E NFLGLPIR G RECP+YMRTGSCKF NC+F+HPDPTA
Sbjct: 226 TRGKISTAPAPLLELNFLGLPIRLGERECPYYMRTGSCKFGANCKFNHPDPTAVGGVGGD 285
Query: 1030 XXXXXXXSIPLHASSDSQPAVASWSIPQPSIDTVPYSDSSRSYMPVMLQP-QGVVHSGPE 854
+ SQ +V SWS P+ ++ P ++P+ML P QGV +
Sbjct: 286 PASGYGNGGSISLQGVSQTSVPSWSSPRTLNESSP-------FVPMMLSPTQGVSTQSSD 338
Query: 853 WNGYQA----PGSPIYQPMASSLNGSNKNLDGYSHHLQQQMPVDEFPERPGQKECQYYMN 686
WNGYQA P ++ P +N + + Y HH Q+QMPVDEFPERPG+ EC Y++
Sbjct: 339 WNGYQASVYLPERNMHPPSTFVMNNPAIDTNVYMHH-QKQMPVDEFPERPGEPECSYFLK 397
Query: 685 TGNCKYKSTCRFHHPKTRY--XXXXXXXXXXXXLRPDQIVCTHYSRFGICKYGAACKYDH 512
TG+CK+KS C+F+HPK R LRPDQ VC+HYSR+GICK+G ACK+DH
Sbjct: 398 TGDCKFKSNCKFNHPKNRVARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDH 457
Score = 81.3 bits (199), Expect = 8e-13
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = -1
Query: 1285 ENPKRVGRLECKYYLSPGGCKFGKACRYHHPREKIVVEPPAEFNFLGLPIRPGARECPFY 1106
E P+R G EC Y+L G CKF C+++HP+ ++ PP + GLP+RP C Y
Sbjct: 382 EFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDKGLPLRPDQSVCSHY 441
Query: 1105 MRTGSCKFATNCRFHHP 1055
R G CKF C+F HP
Sbjct: 442 SRYGICKFGPACKFDHP 458
Score = 65.9 bits (159), Expect = 3e-08
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = -1
Query: 730 FPERPGQKECQYYMNTGNCKYKSTCRFHHP---KTRYXXXXXXXXXXXXLRPDQIVCTHY 560
+P RP ++C +Y+ TGNCK+ C+F+HP K++ R C +Y
Sbjct: 150 YPLRPEAEDCAFYIKTGNCKFGFNCKFNHPIRRKSQAVKEKAGEREETTERSGMTECKYY 209
Query: 559 SRFGICKYGAACKYDHT 509
R G CK+G +CKY+HT
Sbjct: 210 QRSGGCKFGKSCKYNHT 226