BLASTX nr result

ID: Cimicifuga21_contig00007829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007829
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subuni...   300   3e-79
ref|XP_002310244.1| predicted protein [Populus trichocarpa] gi|2...   298   1e-78
ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinu...   296   4e-78
gb|AFK44376.1| unknown [Medicago truncatula]                          294   2e-77
ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|2...   291   1e-76

>ref|XP_002266072.1| PREDICTED: anaphase-promoting complex subunit 10 [Vitis vinifera]
           gi|297735140|emb|CBI17502.3| unnamed protein product
           [Vitis vinifera]
          Length = 192

 Score =  300 bits (769), Expect = 3e-79
 Identities = 146/187 (78%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
 Frame = +1

Query: 181 SDGEDEEKLARGTK-LVVDEDLREMAKKAAWSVSSCKSGNGVQFLRDDNLDTYWQSDGAQ 357
           S+GE+E K+  G + LVVDEDLREMAKKAAWSVSSCK+GNGV  LRDDNLDTYWQSDGAQ
Sbjct: 6   SEGEEEGKMIGGNQHLVVDEDLREMAKKAAWSVSSCKAGNGVLLLRDDNLDTYWQSDGAQ 65

Query: 358 PHMVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGNGFHNLKEIKSVELTKPTGWI 537
           PH+VNI             YVDFKLDESYTPSKIS+RAG+GFHNLKEIK+VEL KPTGW+
Sbjct: 66  PHLVNIQFLKKVKLQLVVIYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELVKPTGWV 125

Query: 538 YIPLSGTDPREVFINTFMLQIAIISNHLNGRDTHVRQIKIYGPQLNPIPCQPFQFTSREF 717
           YI LSG DPRE F+NTFMLQIAI+SNHLNGRDTHVRQIK+YGP  NPIP QPFQFTSREF
Sbjct: 126 YISLSGNDPRETFVNTFMLQIAILSNHLNGRDTHVRQIKVYGPPPNPIPRQPFQFTSREF 185

Query: 718 ITYSTVR 738
           ITYS+VR
Sbjct: 186 ITYSSVR 192


>ref|XP_002310244.1| predicted protein [Populus trichocarpa] gi|222853147|gb|EEE90694.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  298 bits (763), Expect = 1e-78
 Identities = 141/187 (75%), Positives = 159/187 (85%), Gaps = 1/187 (0%)
 Frame = +1

Query: 181 SDGEDEEKLARGTKL-VVDEDLREMAKKAAWSVSSCKSGNGVQFLRDDNLDTYWQSDGAQ 357
           S+GE+E K+  G KL V+++DLREM KKAAWSVSSCK GNGV  LRDDNLDTYWQSDGAQ
Sbjct: 6   SEGEEEGKITGGNKLLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYWQSDGAQ 65

Query: 358 PHMVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGNGFHNLKEIKSVELTKPTGWI 537
           PH+VNI             YVDFKLDESYTPSKIS+RAG+GFHNLKEIK++EL KPTGW+
Sbjct: 66  PHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTMELVKPTGWV 125

Query: 538 YIPLSGTDPREVFINTFMLQIAIISNHLNGRDTHVRQIKIYGPQLNPIPCQPFQFTSREF 717
           Y+ LSG DPRE F+NTFMLQIA++SNHLNGRDTHVRQIK+YGPQLNP P QPFQFTSREF
Sbjct: 126 YLSLSGNDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPQLNPFPHQPFQFTSREF 185

Query: 718 ITYSTVR 738
           ITYS+VR
Sbjct: 186 ITYSSVR 192


>ref|XP_002521569.1| anaphase-promoting complex, putative [Ricinus communis]
           gi|223539247|gb|EEF40840.1| anaphase-promoting complex,
           putative [Ricinus communis]
          Length = 192

 Score =  296 bits (759), Expect = 4e-78
 Identities = 141/187 (75%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
 Frame = +1

Query: 181 SDGEDEEKLARGTK-LVVDEDLREMAKKAAWSVSSCKSGNGVQFLRDDNLDTYWQSDGAQ 357
           S+GE+E K+  G + LVVD+DLREM KKAAWSVSSCK GNGV  LRDDNLD++WQSDGAQ
Sbjct: 6   SEGEEEGKITGGNQHLVVDDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDSFWQSDGAQ 65

Query: 358 PHMVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGNGFHNLKEIKSVELTKPTGWI 537
           PH+VNI             YVDFKLDESYTPSKIS+RAG+GFHNLKEIK+VEL KPTGW+
Sbjct: 66  PHLVNIQFQKKVKLQLVLLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTVELVKPTGWV 125

Query: 538 YIPLSGTDPREVFINTFMLQIAIISNHLNGRDTHVRQIKIYGPQLNPIPCQPFQFTSREF 717
           Y+ LSG DPRE F+NTFMLQIA++SNHLNGRDTHVRQIK+YGP+LNPIP QPFQFTSREF
Sbjct: 126 YLSLSGNDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRLNPIPHQPFQFTSREF 185

Query: 718 ITYSTVR 738
           ITYS+VR
Sbjct: 186 ITYSSVR 192


>gb|AFK44376.1| unknown [Medicago truncatula]
          Length = 196

 Score =  294 bits (753), Expect = 2e-77
 Identities = 140/187 (74%), Positives = 159/187 (85%), Gaps = 1/187 (0%)
 Frame = +1

Query: 181 SDGEDEEKLARGTK-LVVDEDLREMAKKAAWSVSSCKSGNGVQFLRDDNLDTYWQSDGAQ 357
           S+GE+E KL+ G + L+VDEDLRE+ KKAAWSVSSCK+GNGV  LRDDNL+TYWQSDGAQ
Sbjct: 10  SEGEEEGKLSGGNQVLIVDEDLRELGKKAAWSVSSCKTGNGVSSLRDDNLETYWQSDGAQ 69

Query: 358 PHMVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGNGFHNLKEIKSVELTKPTGWI 537
           PH VNI             YVDFKLDESYTPSKIS+RAG+GFHNLKEIK+VEL KPTGW+
Sbjct: 70  PHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWL 129

Query: 538 YIPLSGTDPREVFINTFMLQIAIISNHLNGRDTHVRQIKIYGPQLNPIPCQPFQFTSREF 717
           Y+ LSG DPRE F+NTFMLQIA++SNHLNGRDTHVRQIK+YGP+ NPIP QPFQFTS EF
Sbjct: 130 YLSLSGLDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSTEF 189

Query: 718 ITYSTVR 738
           ITYST+R
Sbjct: 190 ITYSTIR 196


>ref|XP_002327795.1| predicted protein [Populus trichocarpa] gi|222836880|gb|EEE75273.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  291 bits (746), Expect = 1e-76
 Identities = 138/187 (73%), Positives = 157/187 (83%), Gaps = 1/187 (0%)
 Frame = +1

Query: 181 SDGEDEEKLARGTK-LVVDEDLREMAKKAAWSVSSCKSGNGVQFLRDDNLDTYWQSDGAQ 357
           S+GE+E K+  G K LV+++DLREM KKAAWSVSSCK GNGV  LRDDNLDTYWQSDGAQ
Sbjct: 6   SEGEEEGKITGGNKHLVIEDDLREMGKKAAWSVSSCKPGNGVSSLRDDNLDTYWQSDGAQ 65

Query: 358 PHMVNIXXXXXXXXXXXXXYVDFKLDESYTPSKISVRAGNGFHNLKEIKSVELTKPTGWI 537
           PH+VNI             YVDFKLDESYTPSKIS+RAG+GFHNLKEIK++EL KPTGW+
Sbjct: 66  PHLVNIQFQKKVKLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKTMELVKPTGWV 125

Query: 538 YIPLSGTDPREVFINTFMLQIAIISNHLNGRDTHVRQIKIYGPQLNPIPCQPFQFTSREF 717
           Y+ LSG DPRE F+NTFMLQIA++SNHLNGRDTHVRQIK+YGP+ NP P QPFQFTSREF
Sbjct: 126 YLSLSGNDPRETFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPFPHQPFQFTSREF 185

Query: 718 ITYSTVR 738
           I YS+VR
Sbjct: 186 IMYSSVR 192


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