BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007824
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...    47   1e-07

>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica]
          Length = 1390

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
 Frame = -1

Query: 139 IYDSIRGEILCTDPLPGTETVFSTV*REKQRRNTML----NQGDISQVAM 2
           ++D +R +IL T PLP  E VFS V RE QR  TM+    NQG +  +AM
Sbjct: 195 VFDKVRSDILRTQPLPSVEEVFSVVRREAQRHATMMGGSNNQGGVPSLAM 244



 Score = 33.9 bits (76), Expect(2) = 1e-07
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 255 EELNHRKPIPFT*TDVIKVRTTEFDEERVYLFLAGLDDIY 136
           +EL+ R+PI        K    E   +RVY FL GLDD++
Sbjct: 157 QELDQRRPIKMECAVDFKTLREEIQLDRVYAFLVGLDDVF 196