BLASTX nr result

ID: Cimicifuga21_contig00007809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007809
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528138.1| conserved hypothetical protein [Ricinus comm...   134   1e-29
ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protei...   133   3e-29
ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protei...   128   9e-28
ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protei...   128   9e-28
ref|XP_002865330.1| hypothetical protein ARALYDRAFT_494514 [Arab...   124   2e-26

>ref|XP_002528138.1| conserved hypothetical protein [Ricinus communis]
           gi|223532436|gb|EEF34229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 105

 Score =  134 bits (338), Expect = 1e-29
 Identities = 69/97 (71%), Positives = 75/97 (77%)
 Frame = -3

Query: 605 LKSILAAATISGLAEARARIFGHILNPTGQRSAHKILRKKLIGEKVAAWYPHDIKKDDPD 426
           LK ILAAA  +G+AEARARIFGHILNPTG +S HKILRKKLIGEKVA WYPHDIK+DDP 
Sbjct: 7   LKGILAAAVTTGVAEARARIFGHILNPTGLKSPHKILRKKLIGEKVAQWYPHDIKRDDPL 66

Query: 425 IMARQEQERLSKLEMLXXXXXXXXXXXXXXRAIKRNK 315
           +MARQEQERLSKLEML               A+KRNK
Sbjct: 67  VMARQEQERLSKLEMLKRRGKGPPKKGQGKGAMKRNK 103


>ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protein S27 [Vitis vinifera]
           gi|297738035|emb|CBI27236.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  133 bits (334), Expect = 3e-29
 Identities = 69/97 (71%), Positives = 75/97 (77%)
 Frame = -3

Query: 605 LKSILAAATISGLAEARARIFGHILNPTGQRSAHKILRKKLIGEKVAAWYPHDIKKDDPD 426
           LKS+L+AA   G+ EARARIFGH+LNPTGQRS HKILRKKLIGEKVA WYP+DIKKDDP 
Sbjct: 6   LKSLLSAAVKGGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIKKDDPL 65

Query: 425 IMARQEQERLSKLEMLXXXXXXXXXXXXXXRAIKRNK 315
           +MARQEQERLSKLEML              RA KRNK
Sbjct: 66  VMARQEQERLSKLEMLKRRGKGPPKKGQGKRAAKRNK 102


>ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 141

 Score =  128 bits (321), Expect = 9e-28
 Identities = 66/97 (68%), Positives = 74/97 (76%)
 Frame = -3

Query: 605 LKSILAAATISGLAEARARIFGHILNPTGQRSAHKILRKKLIGEKVAAWYPHDIKKDDPD 426
           LKS++AAA   G+ EARARIFGHILNPTGQRS HK+LRKKLIG+KV+ WYP+DIKKDDP 
Sbjct: 45  LKSMIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPL 104

Query: 425 IMARQEQERLSKLEMLXXXXXXXXXXXXXXRAIKRNK 315
           +MAR EQERLSKLEML              RA KRNK
Sbjct: 105 VMARLEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK 141


>ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protein S27-like isoform 1
           [Cucumis sativus] gi|449454786|ref|XP_004145135.1|
           PREDICTED: mitochondral 37S ribosomal protein S27-like
           isoform 2 [Cucumis sativus]
           gi|449454788|ref|XP_004145136.1| PREDICTED: mitochondral
           37S ribosomal protein S27-like isoform 3 [Cucumis
           sativus]
          Length = 102

 Score =  128 bits (321), Expect = 9e-28
 Identities = 66/97 (68%), Positives = 74/97 (76%)
 Frame = -3

Query: 605 LKSILAAATISGLAEARARIFGHILNPTGQRSAHKILRKKLIGEKVAAWYPHDIKKDDPD 426
           LKS++AAA   G+ EARARIFGHILNPTGQRS HK+LRKKLIG+KV+ WYP+DIKKDDP 
Sbjct: 6   LKSMIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPL 65

Query: 425 IMARQEQERLSKLEMLXXXXXXXXXXXXXXRAIKRNK 315
           +MAR EQERLSKLEML              RA KRNK
Sbjct: 66  VMARLEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK 102


>ref|XP_002865330.1| hypothetical protein ARALYDRAFT_494514 [Arabidopsis lyrata subsp.
           lyrata] gi|297311165|gb|EFH41589.1| hypothetical protein
           ARALYDRAFT_494514 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score =  124 bits (310), Expect = 2e-26
 Identities = 61/97 (62%), Positives = 75/97 (77%)
 Frame = -3

Query: 605 LKSILAAATISGLAEARARIFGHILNPTGQRSAHKILRKKLIGEKVAAWYPHDIKKDDPD 426
           LKS++++A   G+ EARARIFGH+LNPTGQRS HKILRKKLIG+KVA WYP+DIK +DP+
Sbjct: 6   LKSLISSAVGRGVTEARARIFGHMLNPTGQRSPHKILRKKLIGDKVAEWYPYDIKNEDPN 65

Query: 425 IMARQEQERLSKLEMLXXXXXXXXXXXXXXRAIKRNK 315
           ++AR+EQER+SKLEML              RA KRNK
Sbjct: 66  VLAREEQERISKLEMLKRRNKGPPKKGHGKRAAKRNK 102


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