BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007807
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ...   359   7e-97
emb|CBI31214.3| unnamed protein product [Vitis vinifera]              359   7e-97
ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa ...   308   2e-81
gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]        306   6e-81
ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea ma...   306   6e-81

>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
            vinifera]
          Length = 529

 Score =  359 bits (921), Expect = 7e-97
 Identities = 187/306 (61%), Positives = 220/306 (71%)
 Frame = -2

Query: 1066 VFLQLCKLLRLEEHPIVQKLVDPSLFIHRFTERLLGGKNASVSKTALLILASMKRDWMQT 887
            VFLQLCKLL LEEHPIVQK VDPSLFIHRF   L G  N  VSKTAL I+ASMKRDW+QT
Sbjct: 153  VFLQLCKLLSLEEHPIVQKPVDPSLFIHRFAAGLPGETNMGVSKTALRIIASMKRDWLQT 212

Query: 886  GRKPSGLCGAALYISAHSYGLKCSKSDIGRVVHICEATLTKRLIEFENTESGSLTIEELD 707
            GRKPSGLCGAALYISA SYGLKCSK+DI ++VHICEATLTKRLIEFENTESGSLTIEE +
Sbjct: 213  GRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTKRLIEFENTESGSLTIEEFN 272

Query: 706  TKAAELAKEPGSGKLANVAIKSSGEMELLCKHKGSGAPHFAHGLCNICYNDFVEISGGLQ 527
             KA EL KE  S K +N+     G+ ELLC+HKGSG P FAHGLC ICY +F+++SGGL+
Sbjct: 273  MKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLE 332

Query: 526  GGSDPPAFQRSERERMVKASSIXXXXXXXXXXXXXEPFSQPNQDVNANEKLYSQLSDGLG 347
            GGS+PPAFQR+ER+RM KA++                    + DV  NE         +G
Sbjct: 333  GGSEPPAFQRAERDRMAKAAA----EENADSNQIQLDKGSSSPDVCGNESSKLAEPKSIG 388

Query: 346  GVNGSRAAKESVCSQSNENPDMDTVAGDEAESLSDIDDVEVNGYLHDEDEKRLKTIIWET 167
              +   +  E   S  +   D +  AGDE+ESLSDIDDVEV+GYLH+E EK+ K IIWE 
Sbjct: 389  ASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEA 448

Query: 166  LNREYI 149
            +N+EY+
Sbjct: 449  MNKEYL 454


>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  359 bits (921), Expect = 7e-97
 Identities = 187/306 (61%), Positives = 220/306 (71%)
 Frame = -2

Query: 1066 VFLQLCKLLRLEEHPIVQKLVDPSLFIHRFTERLLGGKNASVSKTALLILASMKRDWMQT 887
            VFLQLCKLL LEEHPIVQK VDPSLFIHRF   L G  N  VSKTAL I+ASMKRDW+QT
Sbjct: 153  VFLQLCKLLSLEEHPIVQKPVDPSLFIHRFAAGLPGETNMGVSKTALRIIASMKRDWLQT 212

Query: 886  GRKPSGLCGAALYISAHSYGLKCSKSDIGRVVHICEATLTKRLIEFENTESGSLTIEELD 707
            GRKPSGLCGAALYISA SYGLKCSK+DI ++VHICEATLTKRLIEFENTESGSLTIEE +
Sbjct: 213  GRKPSGLCGAALYISALSYGLKCSKTDIVKIVHICEATLTKRLIEFENTESGSLTIEEFN 272

Query: 706  TKAAELAKEPGSGKLANVAIKSSGEMELLCKHKGSGAPHFAHGLCNICYNDFVEISGGLQ 527
             KA EL KE  S K +N+     G+ ELLC+HKGSG P FAHGLC ICY +F+++SGGL+
Sbjct: 273  MKAEELEKEYSSTKQSNIGSTVPGKGELLCEHKGSGKPPFAHGLCEICYGEFIKLSGGLE 332

Query: 526  GGSDPPAFQRSERERMVKASSIXXXXXXXXXXXXXEPFSQPNQDVNANEKLYSQLSDGLG 347
            GGS+PPAFQR+ER+RM KA++                    + DV  NE         +G
Sbjct: 333  GGSEPPAFQRAERDRMAKAAA----EENADSNQIQLDKGSSSPDVCGNESSKLAEPKSIG 388

Query: 346  GVNGSRAAKESVCSQSNENPDMDTVAGDEAESLSDIDDVEVNGYLHDEDEKRLKTIIWET 167
              +   +  E   S  +   D +  AGDE+ESLSDIDDVEV+GYLH+E EK+ K IIWE 
Sbjct: 389  ASDKQASIDEGAPSDLHGADDENANAGDESESLSDIDDVEVDGYLHNEKEKQFKKIIWEA 448

Query: 166  LNREYI 149
            +N+EY+
Sbjct: 449  MNKEYL 454


>ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
            [Brachypodium distachyon]
          Length = 580

 Score =  308 bits (788), Expect = 2e-81
 Identities = 167/308 (54%), Positives = 206/308 (66%), Gaps = 2/308 (0%)
 Frame = -2

Query: 1066 VFLQLCKLLRLEEHPIVQKLVDPSLFIHRFTERLLGGKNASVSKTALLILASMKRDWMQT 887
            VFLQLC++L L EHPIVQKL+DPSLFIHRFTERLLG ++ +VS TAL I+ASMKRDWMQT
Sbjct: 154  VFLQLCQVLLLAEHPIVQKLIDPSLFIHRFTERLLGKRDNAVSDTALRIVASMKRDWMQT 213

Query: 886  GRKPSGLCGAALYISAHSYGLKCSKSDIGRVVHICEATLTKRLIEFENTESGSLTIEELD 707
            GRKPSGLCGAALYI+A S+G   +KSDI  VVHICEATLTKRLIEFENT+SGSLTIE+  
Sbjct: 214  GRKPSGLCGAALYIAALSHGYNYTKSDIVGVVHICEATLTKRLIEFENTDSGSLTIEDFL 273

Query: 706  TKAAELAKEPGSGKLANVAIKSSGEMELLCKHKGSGAPHFAHGLCNICYNDFVEISGGLQ 527
             KA E  ++P       V+  S    E+LCKHK     HFAHGLC  CYN F+++SGGL+
Sbjct: 274  AKADE--EQP-------VSKPSRKSGEVLCKHKDKDTEHFAHGLCEKCYNKFIKMSGGLE 324

Query: 526  GGSDPPAFQRSERERMVKASSIXXXXXXXXXXXXXEPFSQPNQDVNAN--EKLYSQLSDG 353
            GG+DPPAFQR+ER+R+  A                      N DV  N        + D 
Sbjct: 325  GGADPPAFQRAERQRLEAAKKSEEAAALKEAALGESNCEIQNSDVEDNIISLKKGPIGDK 384

Query: 352  LGGVNGSRAAKESVCSQSNENPDMDTVAGDEAESLSDIDDVEVNGYLHDEDEKRLKTIIW 173
               +   + A +++ S+  E    ++    + ES SDIDDVEV+GYLH+E+E   K IIW
Sbjct: 385  SSTIPSEQNANDNIASKDPEVGGENSKPDADPESFSDIDDVEVDGYLHNEEETHYKKIIW 444

Query: 172  ETLNREYI 149
            E +N+EYI
Sbjct: 445  EEMNKEYI 452


>gb|AFW78953.1| hypothetical protein ZEAMMB73_136276 [Zea mays]
          Length = 515

 Score =  306 bits (784), Expect = 6e-81
 Identities = 169/313 (53%), Positives = 204/313 (65%), Gaps = 7/313 (2%)
 Frame = -2

Query: 1066 VFLQLCKLLRLEEHPIVQKLVDPSLFIHRFTERLLGGKNASVSKTALLILASMKRDWMQT 887
            VFLQLC++L+L EHP+VQKLVDPSLFIHRFT+ LLG +N  VS TAL I+ASMKRDWMQT
Sbjct: 89   VFLQLCQVLQLAEHPVVQKLVDPSLFIHRFTKLLLGRRNNDVSDTALRIVASMKRDWMQT 148

Query: 886  GRKPSGLCGAALYISAHSYGLKCSKSDIGRVVHICEATLTKRLIEFENTESGSLTIEELD 707
            GRKPSGLCGAALYI+A S+G   +K+DI  VVH+CEATLTKRLIEFENT+SGSLTIEE  
Sbjct: 149  GRKPSGLCGAALYIAALSHGCNYTKADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFL 208

Query: 706  TKAAELAKEPGSGKLANVAIKSSGEMELLCKHKGSGAPHFAHGLCNICYNDFVEISGGLQ 527
              A E  +EP       V+  S    E+LCKHK  G  HFAHGLC  CYN F ++SGGL+
Sbjct: 209  ATADESNEEP-------VSKHSPKSGEILCKHKDKGFEHFAHGLCEKCYNKFTKLSGGLE 261

Query: 526  GGSDPPAFQRSERERMVKASSIXXXXXXXXXXXXXEPFSQPNQDVNANEKLYSQLSDGLG 347
            GGSDPPAFQR+E++R+  A                      N +V +          GL 
Sbjct: 262  GGSDPPAFQRAEKKRLEAAKRAEEAAAAKEAALEESLCDTQNSEVES----AMTPRKGLS 317

Query: 346  GVNGSRAAKESVCSQSNENPDMDTVAGDE-------AESLSDIDDVEVNGYLHDEDEKRL 188
            G   S+   E + + S   P  D   G E        ESLSDIDD EV+GYLH+E+E + 
Sbjct: 318  GDKSSKMGSEGLINDS--MPPKDPEEGGENCEGNADPESLSDIDDAEVDGYLHNEEETQY 375

Query: 187  KTIIWETLNREYI 149
            K IIWE +N+EY+
Sbjct: 376  KKIIWEEMNKEYL 388


>ref|NP_001141990.1| uncharacterized protein LOC100274140 [Zea mays]
            gi|194706710|gb|ACF87439.1| unknown [Zea mays]
            gi|413946300|gb|AFW78949.1| hypothetical protein
            ZEAMMB73_136276 [Zea mays]
          Length = 580

 Score =  306 bits (784), Expect = 6e-81
 Identities = 169/313 (53%), Positives = 204/313 (65%), Gaps = 7/313 (2%)
 Frame = -2

Query: 1066 VFLQLCKLLRLEEHPIVQKLVDPSLFIHRFTERLLGGKNASVSKTALLILASMKRDWMQT 887
            VFLQLC++L+L EHP+VQKLVDPSLFIHRFT+ LLG +N  VS TAL I+ASMKRDWMQT
Sbjct: 154  VFLQLCQVLQLAEHPVVQKLVDPSLFIHRFTKLLLGRRNNDVSDTALRIVASMKRDWMQT 213

Query: 886  GRKPSGLCGAALYISAHSYGLKCSKSDIGRVVHICEATLTKRLIEFENTESGSLTIEELD 707
            GRKPSGLCGAALYI+A S+G   +K+DI  VVH+CEATLTKRLIEFENT+SGSLTIEE  
Sbjct: 214  GRKPSGLCGAALYIAALSHGCNYTKADIVSVVHVCEATLTKRLIEFENTDSGSLTIEEFL 273

Query: 706  TKAAELAKEPGSGKLANVAIKSSGEMELLCKHKGSGAPHFAHGLCNICYNDFVEISGGLQ 527
              A E  +EP       V+  S    E+LCKHK  G  HFAHGLC  CYN F ++SGGL+
Sbjct: 274  ATADESNEEP-------VSKHSPKSGEILCKHKDKGFEHFAHGLCEKCYNKFTKLSGGLE 326

Query: 526  GGSDPPAFQRSERERMVKASSIXXXXXXXXXXXXXEPFSQPNQDVNANEKLYSQLSDGLG 347
            GGSDPPAFQR+E++R+  A                      N +V +          GL 
Sbjct: 327  GGSDPPAFQRAEKKRLEAAKRAEEAAAAKEAALEESLCDTQNSEVES----AMTPRKGLS 382

Query: 346  GVNGSRAAKESVCSQSNENPDMDTVAGDE-------AESLSDIDDVEVNGYLHDEDEKRL 188
            G   S+   E + + S   P  D   G E        ESLSDIDD EV+GYLH+E+E + 
Sbjct: 383  GDKSSKMGSEGLINDS--MPPKDPEEGGENCEGNADPESLSDIDDAEVDGYLHNEEETQY 440

Query: 187  KTIIWETLNREYI 149
            K IIWE +N+EY+
Sbjct: 441  KKIIWEEMNKEYL 453