BLASTX nr result

ID: Cimicifuga21_contig00007758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007758
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264...    99   5e-19
emb|CAN60540.1| hypothetical protein VITISV_018288 [Vitis vinifera]    99   5e-19
ref|XP_003536078.1| PREDICTED: uncharacterized protein LOC100803...    93   3e-17
ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|1...    91   7e-17
gb|AFK35394.1| unknown [Lotus japonicus]                               87   1e-15

>ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264831 [Vitis vinifera]
           gi|296088326|emb|CBI36771.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 4/83 (4%)
 Frame = +1

Query: 13  TRAKFEKFETDETAAPSSPPPLGDTQQQQPLDS----LQEAEEEDDSCLPSDLEGAVRQS 180
           TRAKFEKF+ D   A         +Q   PL+S    +QE  EEDDSCLPSDLEGAVRQS
Sbjct: 54  TRAKFEKFQDDPPQADDLQFSAAPSQSSSPLESQQQAIQEEVEEDDSCLPSDLEGAVRQS 113

Query: 181 SEASATFVSSGGMRAIVELLIPQ 249
            +ASA+FVSSGGMRAIVELLIPQ
Sbjct: 114 GQASASFVSSGGMRAIVELLIPQ 136


>emb|CAN60540.1| hypothetical protein VITISV_018288 [Vitis vinifera]
          Length = 367

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 4/83 (4%)
 Frame = +1

Query: 13  TRAKFEKFETDETAAPSSPPPLGDTQQQQPLDS----LQEAEEEDDSCLPSDLEGAVRQS 180
           TRAKFEKF+ D   A         +Q   PL+S    +QE  EEDDSCLPSDLEGAVRQS
Sbjct: 54  TRAKFEKFQDDPPQADDLQFSAAPSQSSSPLESQQQAIQEEVEEDDSCLPSDLEGAVRQS 113

Query: 181 SEASATFVSSGGMRAIVELLIPQ 249
            +ASA+FVSSGGMRAIVELLIPQ
Sbjct: 114 GQASASFVSSGGMRAIVELLIPQ 136


>ref|XP_003536078.1| PREDICTED: uncharacterized protein LOC100803954 [Glycine max]
          Length = 344

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
 Frame = +1

Query: 10  RTRAKFEKFETD--ETAAPSSPPPLGDTQQQQPLDSLQEAEEEDDSCLPSDLEGAVRQSS 183
           R  AKFEKF++   ++  P   P L +T +    D     +EEDDSCLPSDLEGAVRQSS
Sbjct: 52  RVFAKFEKFQSQPSQSQEPDPSPSLEETTETSVQD-----DEEDDSCLPSDLEGAVRQSS 106

Query: 184 EASATFVSSGGMRAIVELLIPQ 249
           EA+ATFVSSGGMRAIVELLIPQ
Sbjct: 107 EAAATFVSSGGMRAIVELLIPQ 128


>ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|118487454|gb|ABK95555.1|
           unknown [Populus trichocarpa]
           gi|222857384|gb|EEE94931.1| predicted protein [Populus
           trichocarpa]
          Length = 339

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = +1

Query: 7   TRTRAKFEKFETDETAAPSSPPPLGDTQQQQPLDSLQEAEEEDDSCLPSDLEGAVRQSSE 186
           +R  AKFEKFE D+    +S   L +  + Q  +  Q  +EEDDSCLPSDLEGAVRQSS+
Sbjct: 48  SRILAKFEKFEGDD----ASQDNLEEAMELQ--EQAQTVQEEDDSCLPSDLEGAVRQSSQ 101

Query: 187 ASATFVSSGGMRAIVELLIPQ 249
           ASA FVSSGGMRAIVELLIPQ
Sbjct: 102 ASALFVSSGGMRAIVELLIPQ 122


>gb|AFK35394.1| unknown [Lotus japonicus]
          Length = 318

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/84 (61%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
 Frame = +1

Query: 16  RAKFEKF------ETDETAAPSSPPPLGDTQQQQPLDSLQEAEEEDDSCLPSDLEGAVRQ 177
           RAKFEKF      E  + ++ SS   L +TQ         E EEEDDSCLP DLEGAVRQ
Sbjct: 48  RAKFEKFQGEPLQEAQDLSSSSSSSSLENTQTSL------EDEEEDDSCLPPDLEGAVRQ 101

Query: 178 SSEASATFVSSGGMRAIVELLIPQ 249
           SSEA+A FV+SGGMRAIVELLIPQ
Sbjct: 102 SSEAAAIFVTSGGMRAIVELLIPQ 125


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