BLASTX nr result

ID: Cimicifuga21_contig00007703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007703
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265766.1| PREDICTED: nuclear migration protein nudC [V...   302   8e-80
ref|NP_001057221.1| Os06g0231300 [Oryza sativa Japonica Group] g...   301   1e-79
ref|XP_003564045.1| PREDICTED: nuclear migration protein nudC-li...   296   8e-78
ref|XP_002321414.1| predicted protein [Populus trichocarpa] gi|2...   293   4e-77
gb|ACN25640.1| unknown [Zea mays]                                     293   6e-77

>ref|XP_002265766.1| PREDICTED: nuclear migration protein nudC [Vitis vinifera]
           gi|302144032|emb|CBI23137.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  302 bits (774), Expect = 8e-80
 Identities = 135/169 (79%), Positives = 155/169 (91%)
 Frame = -2

Query: 726 PNKGNGLDFEKYSWTQTLHEATITVPVPPGTKARFVVCEIKKNHVKIGLKGEPPIVDGEL 547
           PNKGNGLD EKYSW QTL E T+TVPVPPGTK+RF+VC+IKKNH+K+GLKG PPI+DGEL
Sbjct: 121 PNKGNGLDLEKYSWMQTLQEVTVTVPVPPGTKSRFIVCDIKKNHLKVGLKGHPPIIDGEL 180

Query: 546 FQPVKVDDCFWSIEDQKFISVLLTKQKQMEWWKYLIKGEPEVDTQKTEPETSKLSDLDPE 367
            +P+K DDCFWS+EDQK +S+LLTK  QMEWWK L+KG+PE+DTQK EPE SKLSDLDPE
Sbjct: 181 SKPIKPDDCFWSLEDQKSVSILLTKHNQMEWWKSLVKGDPEIDTQKVEPENSKLSDLDPE 240

Query: 366 TRQTVEKMMFDQRQKSMGLPTSDEMQKNDLLKKFMAEHPEMDFSRAKMA 220
           TRQTVEKMMFDQRQK+MGLPTSDEMQK ++LKKFMAEHPEMDFSRAK++
Sbjct: 241 TRQTVEKMMFDQRQKTMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS 289


>ref|NP_001057221.1| Os06g0231300 [Oryza sativa Japonica Group]
           gi|51535412|dbj|BAD37282.1| putative salt tolerance
           protein 5 [Oryza sativa Japonica Group]
           gi|113595261|dbj|BAF19135.1| Os06g0231300 [Oryza sativa
           Japonica Group] gi|125554649|gb|EAZ00255.1| hypothetical
           protein OsI_22266 [Oryza sativa Indica Group]
           gi|125596588|gb|EAZ36368.1| hypothetical protein
           OsJ_20696 [Oryza sativa Japonica Group]
          Length = 308

 Score =  301 bits (772), Expect = 1e-79
 Identities = 139/173 (80%), Positives = 155/173 (89%)
 Frame = -2

Query: 738 NVHAPNKGNGLDFEKYSWTQTLHEATITVPVPPGTKARFVVCEIKKNHVKIGLKGEPPIV 559
           NV  PN GNGLD EKYSW Q L E TITVPVP GTK+RFVVC+IKKNH+K+GLKG+PPI+
Sbjct: 136 NVRKPNAGNGLDLEKYSWIQQLPEVTITVPVPQGTKSRFVVCDIKKNHLKVGLKGQPPII 195

Query: 558 DGELFQPVKVDDCFWSIEDQKFISVLLTKQKQMEWWKYLIKGEPEVDTQKTEPETSKLSD 379
           DGELF+PVKVDDCFWSIED K +S+LLTKQ QMEWWK ++KG+PEVDTQK EPE SKL+D
Sbjct: 196 DGELFKPVKVDDCFWSIEDGKSLSILLTKQNQMEWWKSVVKGDPEVDTQKVEPENSKLAD 255

Query: 378 LDPETRQTVEKMMFDQRQKSMGLPTSDEMQKNDLLKKFMAEHPEMDFSRAKMA 220
           LDPETRQTVEKMMFDQRQK MGLPTSDEMQK D+LKKFMA+HPEMDFS AK+A
Sbjct: 256 LDPETRQTVEKMMFDQRQKQMGLPTSDEMQKQDMLKKFMAQHPEMDFSNAKIA 308


>ref|XP_003564045.1| PREDICTED: nuclear migration protein nudC-like [Brachypodium
           distachyon]
          Length = 332

 Score =  296 bits (757), Expect = 8e-78
 Identities = 137/169 (81%), Positives = 152/169 (89%)
 Frame = -2

Query: 726 PNKGNGLDFEKYSWTQTLHEATITVPVPPGTKARFVVCEIKKNHVKIGLKGEPPIVDGEL 547
           PN GNGLD EKYSWTQ L E  ITVPVP GTK+RFVVCEIKKNH+K+GLKG+PPI+DGEL
Sbjct: 164 PNAGNGLDLEKYSWTQQLPEVNITVPVPEGTKSRFVVCEIKKNHLKVGLKGQPPIIDGEL 223

Query: 546 FQPVKVDDCFWSIEDQKFISVLLTKQKQMEWWKYLIKGEPEVDTQKTEPETSKLSDLDPE 367
            +PVKVDDCFWSIED K +S+LLTK  QMEWWK +IKG+PEVDTQ+ EPE SKLSDLDPE
Sbjct: 224 HKPVKVDDCFWSIEDGKSLSILLTKHNQMEWWKSVIKGDPEVDTQRVEPENSKLSDLDPE 283

Query: 366 TRQTVEKMMFDQRQKSMGLPTSDEMQKNDLLKKFMAEHPEMDFSRAKMA 220
           TRQTVEKMMFDQRQK MGLPTSDEMQK ++LKKFM+EHPEMDFSRAK+A
Sbjct: 284 TRQTVEKMMFDQRQKQMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIA 332


>ref|XP_002321414.1| predicted protein [Populus trichocarpa] gi|222868410|gb|EEF05541.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  293 bits (751), Expect = 4e-77
 Identities = 131/169 (77%), Positives = 153/169 (90%)
 Frame = -2

Query: 726 PNKGNGLDFEKYSWTQTLHEATITVPVPPGTKARFVVCEIKKNHVKIGLKGEPPIVDGEL 547
           PN GNGLD EKYSWTQTL E  + +PVP GTK+RFV+C+IKKNH+K+GLKG+PPIV+GEL
Sbjct: 14  PNNGNGLDLEKYSWTQTLQEVNVQIPVPSGTKSRFVICDIKKNHLKVGLKGQPPIVEGEL 73

Query: 546 FQPVKVDDCFWSIEDQKFISVLLTKQKQMEWWKYLIKGEPEVDTQKTEPETSKLSDLDPE 367
           ++P+KVDDC+WSIEDQ  IS+LLTK  QM+WWK L+KG+PE+DTQK EPE SKLSDLD E
Sbjct: 74  YKPIKVDDCYWSIEDQNTISILLTKHDQMDWWKSLVKGDPEIDTQKVEPENSKLSDLDSE 133

Query: 366 TRQTVEKMMFDQRQKSMGLPTSDEMQKNDLLKKFMAEHPEMDFSRAKMA 220
           TRQTVEKMMFDQRQKSMGLPTSDEMQK ++LKKFM+EHPEMDFSRAK+A
Sbjct: 134 TRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIA 182


>gb|ACN25640.1| unknown [Zea mays]
          Length = 295

 Score =  293 bits (749), Expect = 6e-77
 Identities = 134/172 (77%), Positives = 153/172 (88%)
 Frame = -2

Query: 738 NVHAPNKGNGLDFEKYSWTQTLHEATITVPVPPGTKARFVVCEIKKNHVKIGLKGEPPIV 559
           NV  PN GNGLD EKYSWTQ L E  IT+PVP GTK+RFVV ++KKNH+K+GLKG+PPI+
Sbjct: 123 NVRQPNAGNGLDLEKYSWTQQLPEVNITIPVPQGTKSRFVVFDLKKNHLKVGLKGQPPII 182

Query: 558 DGELFQPVKVDDCFWSIEDQKFISVLLTKQKQMEWWKYLIKGEPEVDTQKTEPETSKLSD 379
           DGEL++PVKVDDCFWSIED + +S+LLTK  QMEWWK +IKG+PEVDTQK EPE SKLSD
Sbjct: 183 DGELYKPVKVDDCFWSIEDGRTLSILLTKHDQMEWWKSVIKGDPEVDTQKVEPENSKLSD 242

Query: 378 LDPETRQTVEKMMFDQRQKSMGLPTSDEMQKNDLLKKFMAEHPEMDFSRAKM 223
           LDPETRQTVEKMMFDQRQK MGLPTSDEMQK ++LKKFM+EHPEMDFSRAK+
Sbjct: 243 LDPETRQTVEKMMFDQRQKQMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKL 294


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