BLASTX nr result
ID: Cimicifuga21_contig00007684
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00007684
(2047 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic sit... 370 e-154
ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic sit... 370 e-154
ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]... 343 e-146
emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera] 343 e-144
ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|2... 347 e-142
>ref|XP_002265926.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform 1
[Vitis vinifera]
Length = 625
Score = 370 bits (950), Expect(2) = e-154
Identities = 194/406 (47%), Positives = 258/406 (63%), Gaps = 23/406 (5%)
Frame = +3
Query: 435 EEPRFRKWFRSLLVGHGGPFLDVFRVKHPQRKDAFTCWSMQSGAEEFNFGSRIDHILVAG 614
E+ FR+WFRS+LV GGPF DVFR KHP R++A+TCWS +GAEEFN+GSRIDHIL +G
Sbjct: 214 EKNEFRRWFRSMLVECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSG 273
Query: 615 PCLHHTDYMDRHNFVNCHIDGCDIMTQFKRWKPENIPRWKEGGKIKLEGSDHAPVYVSLR 794
CLH + FV CH+ CDI+TQFKRWKP N PRWK G IKLEGSDHAPV++SL
Sbjct: 274 SCLHQDHCLQDRIFVTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLM 333
Query: 795 EIPDLPEHNTPSLAARYVPKVHGFQQTIVTLLSKRQVNAQGKDQRVSQLF-DQNFKKGSR 971
+IPD+ +H+TPSL+ARYVP VHGFQQTI ++L KRQ Q K VS F D+N S
Sbjct: 334 DIPDVAQHSTPSLSARYVPTVHGFQQTIASVLMKRQKAEQVKTFEVSSSFSDENITTRSC 393
Query: 972 IDYVERASQDLCASESPLLLNLPAANQESEHV----TSGSVANEAAKETILVTS---KNS 1130
+ ++R+SQD C S+ P L ++N +SE V S+ + + ++T+ + +
Sbjct: 394 SEILKRSSQDCCISDLPSGDFLSSSNLQSEGVIPRLDGPSICSISDSSNRIITASIIRQT 453
Query: 1131 IPMANQISNKKARHSNSNQRTLRSYFQKKPNLN-------VDLSLGHEDINKIEARELSS 1289
++ KKAR S +Q +L+S+FQK N+ D SL D +K +
Sbjct: 454 KSTPGTVTKKKARQSQCSQLSLKSFFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKT 513
Query: 1290 CVGNDVKDSFQKNEVNMIPSTE--------CSLEKQKQSGALLEWQRIQQLMLKHKSVPL 1445
+G+D S + E+++ S + S ++ K AL+EWQRIQQLM S+PL
Sbjct: 514 SMGDDESKSSKMVELDVSASNQEQGVVISGSSPQRDKNDIALVEWQRIQQLM--QNSIPL 571
Query: 1446 CMGHHEPCVARIVKKEGPNLGRKFYVCHRGEGPSSNPDASCDYFKW 1583
C GH EPCV+R+ KK GPN GR+FYVC R EGP+SNP+ +C YFKW
Sbjct: 572 CKGHGEPCVSRLAKKPGPNHGRRFYVCARAEGPASNPETNCGYFKW 617
Score = 204 bits (519), Expect(2) = e-154
Identities = 102/148 (68%), Positives = 119/148 (80%)
Frame = +1
Query: 1 GVATFCRVNSAFSSNEVALPVAAEEGFTSLLEHRRRVNSMKKDILLEVFTEVDGLEGFTN 180
GVATFCRV SAFSS EVALP+AAEEGFT LLE + K +I ++ +GLE F
Sbjct: 74 GVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVKA----EGLEEFAK 129
Query: 181 EDLLKVDSEGRCIITDHGHFVLFNIYGPRAESDDSERIHFKLLFFKILQKRWECYFKQGK 360
++LLKVDSEGRCIITDHGHFVLFNIYGPRA+S+D+ERI FK FF+ILQKRWE +QG+
Sbjct: 130 DELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKRWETLQQQGR 189
Query: 361 RVIVVGDLNIAPFAIDCCEAGPDFEKNQ 444
R+ VVGDLNIAP AID C+AGPDFEKN+
Sbjct: 190 RIFVVGDLNIAPAAIDRCDAGPDFEKNE 217
>ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform 2
[Vitis vinifera]
Length = 596
Score = 370 bits (950), Expect(2) = e-154
Identities = 194/406 (47%), Positives = 258/406 (63%), Gaps = 23/406 (5%)
Frame = +3
Query: 435 EEPRFRKWFRSLLVGHGGPFLDVFRVKHPQRKDAFTCWSMQSGAEEFNFGSRIDHILVAG 614
E+ FR+WFRS+LV GGPF DVFR KHP R++A+TCWS +GAEEFN+GSRIDHIL +G
Sbjct: 185 EKNEFRRWFRSMLVECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSG 244
Query: 615 PCLHHTDYMDRHNFVNCHIDGCDIMTQFKRWKPENIPRWKEGGKIKLEGSDHAPVYVSLR 794
CLH + FV CH+ CDI+TQFKRWKP N PRWK G IKLEGSDHAPV++SL
Sbjct: 245 SCLHQDHCLQDRIFVTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLM 304
Query: 795 EIPDLPEHNTPSLAARYVPKVHGFQQTIVTLLSKRQVNAQGKDQRVSQLF-DQNFKKGSR 971
+IPD+ +H+TPSL+ARYVP VHGFQQTI ++L KRQ Q K VS F D+N S
Sbjct: 305 DIPDVAQHSTPSLSARYVPTVHGFQQTIASVLMKRQKAEQVKTFEVSSSFSDENITTRSC 364
Query: 972 IDYVERASQDLCASESPLLLNLPAANQESEHV----TSGSVANEAAKETILVTS---KNS 1130
+ ++R+SQD C S+ P L ++N +SE V S+ + + ++T+ + +
Sbjct: 365 SEILKRSSQDCCISDLPSGDFLSSSNLQSEGVIPRLDGPSICSISDSSNRIITASIIRQT 424
Query: 1131 IPMANQISNKKARHSNSNQRTLRSYFQKKPNLN-------VDLSLGHEDINKIEARELSS 1289
++ KKAR S +Q +L+S+FQK N+ D SL D +K +
Sbjct: 425 KSTPGTVTKKKARQSQCSQLSLKSFFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKT 484
Query: 1290 CVGNDVKDSFQKNEVNMIPSTE--------CSLEKQKQSGALLEWQRIQQLMLKHKSVPL 1445
+G+D S + E+++ S + S ++ K AL+EWQRIQQLM S+PL
Sbjct: 485 SMGDDESKSSKMVELDVSASNQEQGVVISGSSPQRDKNDIALVEWQRIQQLM--QNSIPL 542
Query: 1446 CMGHHEPCVARIVKKEGPNLGRKFYVCHRGEGPSSNPDASCDYFKW 1583
C GH EPCV+R+ KK GPN GR+FYVC R EGP+SNP+ +C YFKW
Sbjct: 543 CKGHGEPCVSRLAKKPGPNHGRRFYVCARAEGPASNPETNCGYFKW 588
Score = 204 bits (519), Expect(2) = e-154
Identities = 102/148 (68%), Positives = 119/148 (80%)
Frame = +1
Query: 1 GVATFCRVNSAFSSNEVALPVAAEEGFTSLLEHRRRVNSMKKDILLEVFTEVDGLEGFTN 180
GVATFCRV SAFSS EVALP+AAEEGFT LLE + K +I ++ +GLE F
Sbjct: 45 GVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVKA----EGLEEFAK 100
Query: 181 EDLLKVDSEGRCIITDHGHFVLFNIYGPRAESDDSERIHFKLLFFKILQKRWECYFKQGK 360
++LLKVDSEGRCIITDHGHFVLFNIYGPRA+S+D+ERI FK FF+ILQKRWE +QG+
Sbjct: 101 DELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKRWETLQQQGR 160
Query: 361 RVIVVGDLNIAPFAIDCCEAGPDFEKNQ 444
R+ VVGDLNIAP AID C+AGPDFEKN+
Sbjct: 161 RIFVVGDLNIAPAAIDRCDAGPDFEKNE 188
>ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
gi|223539047|gb|EEF40643.1| ap endonuclease, putative
[Ricinus communis]
Length = 586
Score = 343 bits (879), Expect(2) = e-146
Identities = 189/416 (45%), Positives = 244/416 (58%), Gaps = 33/416 (7%)
Frame = +3
Query: 435 EEPRFRKWFRSLLVGHGGPFLDVFRVKHPQRKDAFTCWSMQSGAEEFNFGSRIDHILVAG 614
E+ FR WFRS+LV GGPF DVFR KHP R++A+TCW +GAE+FN+G+RIDHIL AG
Sbjct: 182 EKNEFRIWFRSMLVKSGGPFFDVFRSKHPDRREAYTCWPSNTGAEQFNYGTRIDHILCAG 241
Query: 615 PCLHHTDYMDRHNFVNCHIDGCDIMTQFKRWKPENIPRWKEGGKIKLEGSDHAPVYVSLR 794
PCLH H+FV+CH+ CDI+ +KRWKP + RWK G KLEGSDHAPVY SL
Sbjct: 242 PCLHQEHDFQVHDFVSCHMKDCDILIDYKRWKPGDTMRWKGGWGTKLEGSDHAPVYTSLV 301
Query: 795 EIPDLPEHNTPSLAARYVPKVHGFQQTIVTLLSKRQVNAQGKDQRVSQLFDQNFKKGSRI 974
EIPD+P+H TPSL+ARY+P +HGFQQT+V++L KRQ + Q S D N +
Sbjct: 302 EIPDIPQHGTPSLSARYLPMIHGFQQTLVSVLMKRQASTQVS----SSFSDGNVTIKACN 357
Query: 975 DYVE-----------RASQDLCA---SESPLLLNLPAANQESEHVTSGSVANEAAKETIL 1112
+ ++ AS CA S+ +L S+ S S TI+
Sbjct: 358 ESIKGLYNNCNISDHSASDSSCATKDSDGAILRMEKHCKDFSDQTCSDS--------TIM 409
Query: 1113 VTSKNSIPMANQISNKKARHSNSNQRTLRSYFQKKPNL-----NVDLSLGHEDINKIEAR 1277
+ S++ M + + KKAR S +Q +LRS+FQ+ PN N L + H N +
Sbjct: 410 LQSRHINSMHTEGTKKKARKSQCSQLSLRSFFQRTPNTRSGAENTALDISHSQENVSNSN 469
Query: 1278 ELSS--------------CVGNDVKDSFQKNEVNMIPSTECSLEKQKQSGALLEWQRIQQ 1415
S C N + ++E+N PS EK+K + ALLEWQRIQQ
Sbjct: 470 SPPSETASQDDHNNTPGHCGLNSSSGTQDQDEINNGPS-----EKEKNNVALLEWQRIQQ 524
Query: 1416 LMLKHKSVPLCMGHHEPCVARIVKKEGPNLGRKFYVCHRGEGPSSNPDASCDYFKW 1583
LM S+PLC GH EPCV+RIVKK GP G +FYVC R EGP+SNP+A+C YFKW
Sbjct: 525 LM--QNSIPLCKGHKEPCVSRIVKKPGPTCGHRFYVCARAEGPASNPEANCGYFKW 578
Score = 202 bits (515), Expect(2) = e-146
Identities = 100/148 (67%), Positives = 116/148 (78%)
Frame = +1
Query: 1 GVATFCRVNSAFSSNEVALPVAAEEGFTSLLEHRRRVNSMKKDILLEVFTEVDGLEGFTN 180
GVATFCRV SAFSS+EVALPV AEEGFT L++ R E+ GLE F
Sbjct: 45 GVATFCRVKSAFSSSEVALPVGAEEGFTGLVDCSRNGKH-------EMPVVAQGLEEFDK 97
Query: 181 EDLLKVDSEGRCIITDHGHFVLFNIYGPRAESDDSERIHFKLLFFKILQKRWECYFKQGK 360
++LLK+DSEGRCIITDHGHFVLFN+YGPRAESDD+ERIHFKLLF+ ILQKRWE +QG+
Sbjct: 98 DELLKIDSEGRCIITDHGHFVLFNLYGPRAESDDTERIHFKLLFYNILQKRWESLLQQGR 157
Query: 361 RVIVVGDLNIAPFAIDCCEAGPDFEKNQ 444
R+ VVGDLNIAP A+D C+A PDFEKN+
Sbjct: 158 RIFVVGDLNIAPTAMDRCDADPDFEKNE 185
>emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]
Length = 632
Score = 343 bits (879), Expect(2) = e-144
Identities = 184/391 (47%), Positives = 245/391 (62%), Gaps = 23/391 (5%)
Frame = +3
Query: 435 EEPRFRKWFRSLLVGHGGPFLDVFRVKHPQRKDAFTCWSMQSGAEEFNFGSRIDHILVAG 614
E+ FR+WFRS+LV GGPF DVFR KHP R++A+TCWS +GAEEFN+GSRIDHIL +G
Sbjct: 221 EKNEFRRWFRSMLVECGGPFFDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSG 280
Query: 615 PCLHHTDYMDRHNFVNCHIDGCDIMTQFKRWKPENIPRWKEGGKIKLEGSDHAPVYVSLR 794
CLH + FV CH+ CDI+TQFKRWKP N PRWK G IKLEGSDHAPV++SL
Sbjct: 281 SCLHQDHCLQDRIFVTCHVKECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLM 340
Query: 795 EIPDLPEHNTPSLAARYVPKVHGFQQTIVTLLSKRQVNAQGKDQRVSQLF-DQNFKKGSR 971
+IPD+ +H+TPSL+ARYVP VHGFQQTI ++L KRQ Q K VS F D+N S
Sbjct: 341 DIPDVAQHSTPSLSARYVPTVHGFQQTIASVLMKRQKAEQVKTFEVSSSFSDENITTRSC 400
Query: 972 IDYVERASQDLCASESPLLLNLPAANQESEHV----TSGSVANEAAKETILVTS---KNS 1130
+ ++R+SQD C S+ P L ++N +SE V S+ + + ++T+ + +
Sbjct: 401 SEILKRSSQDCCISDLPSGDFLSSSNLQSEGVIPRLDGPSICSISDSSNRIITASIIRQT 460
Query: 1131 IPMANQISNKKARHSNSNQRTLRSYFQKKPNLN-------VDLSLGHEDINKIEARELSS 1289
++ KKAR S +Q +L+S+FQK N+ D SL D +K +
Sbjct: 461 KSTPGTVTKKKARQSQCSQLSLKSFFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKT 520
Query: 1290 CVGNDVKDSFQKNEVNMIPSTE--------CSLEKQKQSGALLEWQRIQQLMLKHKSVPL 1445
+G+D S + E+++ S + S ++ K AL+EWQRIQQLM S+PL
Sbjct: 521 SMGDDESKSSKMVELDVSASNQEQGVVISGSSPQRDKNDIALVEWQRIQQLM--QNSIPL 578
Query: 1446 CMGHHEPCVARIVKKEGPNLGRKFYVCHRGE 1538
C GH EPCV+R+ KK GPN GR+FYVC R E
Sbjct: 579 CKGHGEPCVSRLAKKPGPNHGRRFYVCARAE 609
Score = 197 bits (501), Expect(2) = e-144
Identities = 102/155 (65%), Positives = 119/155 (76%), Gaps = 7/155 (4%)
Frame = +1
Query: 1 GVATFCRVNSAFSSNEVALPVAAEEGFTSLLEHRRRVNSMKKDILLEVFTEVDGLEGFTN 180
GVATFCRV SAFSS EVALP+AAEEGFT LLE + K +I ++ +GLE F
Sbjct: 74 GVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVKA----EGLEEFAK 129
Query: 181 EDLLKVDSEGRCIITDHGHF-------VLFNIYGPRAESDDSERIHFKLLFFKILQKRWE 339
++LLKVDSEGRCIITDHGHF VLFNIYGPRA+S+D+ERI FK FF+ILQKRWE
Sbjct: 130 DELLKVDSEGRCIITDHGHFADYGNWPVLFNIYGPRADSEDTERIQFKHTFFQILQKRWE 189
Query: 340 CYFKQGKRVIVVGDLNIAPFAIDCCEAGPDFEKNQ 444
+QG+R+ VVGDLNIAP AID C+AGPDFEKN+
Sbjct: 190 TLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNE 224
>ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|222841758|gb|EEE79305.1|
predicted protein [Populus trichocarpa]
Length = 617
Score = 347 bits (890), Expect(2) = e-142
Identities = 184/407 (45%), Positives = 250/407 (61%), Gaps = 24/407 (5%)
Frame = +3
Query: 435 EEPRFRKWFRSLLVGHGGPFLDVFRVKHPQRKDAFTCWSMQSGAEEFNFGSRIDHILVAG 614
E+ FR+WFRS+L+ GG F+DVFR KHP R++A+TCWS +GAE FNFGSRIDHIL AG
Sbjct: 207 EKNEFRRWFRSILMMSGGLFVDVFRAKHPDRREAYTCWSSSTGAELFNFGSRIDHILCAG 266
Query: 615 PCLHHTDYMDRHNFVNCHIDGCDIMTQFKRWKPENIPRWKEGGKIKLEGSDHAPVYVSLR 794
PCLH + HNF++CH+ CDI+TQ+KRWKP + RWK G IKLEGSDHAPVY+SL
Sbjct: 267 PCLHQEHDLQGHNFLSCHVKECDILTQYKRWKPGDSTRWKGGRGIKLEGSDHAPVYMSLE 326
Query: 795 EIPDLPEHNTPSLAARYVPKVHGFQQTIVTLLSKRQVNAQGKDQRVSQLFDQNFKKGSRI 974
EI D+P H+TP L+ARY+P +HG QQT+VTLL KRQ Q + R+S F
Sbjct: 327 EICDIPRHSTPPLSARYLPMIHGVQQTLVTLLMKRQAATQIQSSRISSSFSDGDATIKAC 386
Query: 975 DYVERASQDLCASESPLLLNLPAANQESEHVTSGSVANEAAKE-----------TILVTS 1121
+ S + C+ P P+ + E ++ S +E +K+ T+++ S
Sbjct: 387 SESIKRSFNECSVSRP--STSPSCSLTEEFDSAISKRDENSKDLTDENQGCPDTTMILQS 444
Query: 1122 KNSIPMANQISNKKARHSNSNQRTLRSYFQKKPNLNVDLSLGHEDINKIEARELSSCVGN 1301
+++ + + + KK R S +Q +LRS+FQK PNL+ + + +A +S N
Sbjct: 445 QHTKFVPAEGTKKKPRKSRCSQLSLRSFFQKSPNLSTGAENSSTNASPSQAEPNTSSYSN 504
Query: 1302 ------DVKDSFQKNEVNMIPSTEC-------SLEKQKQSGALLEWQRIQQLMLKHKSVP 1442
D S + ++N ++ SLE++K + ALLEWQRIQQLM S+P
Sbjct: 505 GSHAPGDKSSSPRHCQLNPSAGSQYQDKGNDGSLEREKNNVALLEWQRIQQLM--RNSIP 562
Query: 1443 LCMGHHEPCVARIVKKEGPNLGRKFYVCHRGEGPSSNPDASCDYFKW 1583
+C GH EPCVARIVKK G G +F+VC R EGP SNP+A+C YFKW
Sbjct: 563 VCKGHKEPCVARIVKKPGRTFGHRFFVCSRAEGPVSNPEANCGYFKW 609
Score = 185 bits (470), Expect(2) = e-142
Identities = 92/148 (62%), Positives = 109/148 (73%)
Frame = +1
Query: 1 GVATFCRVNSAFSSNEVALPVAAEEGFTSLLEHRRRVNSMKKDILLEVFTEVDGLEGFTN 180
GVATFCRV SAFSS EVALPVAAEEGFT ++ +R +GLE F
Sbjct: 78 GVATFCRVKSAFSSTEVALPVAAEEGFTGFIDRCKRN---------------EGLEEFEK 122
Query: 181 EDLLKVDSEGRCIITDHGHFVLFNIYGPRAESDDSERIHFKLLFFKILQKRWECYFKQGK 360
++L+KVDSEGRC++TDH HFVLFN+YGPRA DD+ERI FK+ FFKILQKRWE +G+
Sbjct: 123 DELVKVDSEGRCVVTDHNHFVLFNLYGPRAAHDDTERIEFKMKFFKILQKRWENLLHEGR 182
Query: 361 RVIVVGDLNIAPFAIDCCEAGPDFEKNQ 444
RV VVGDLNIAP A+D C+A DFEKN+
Sbjct: 183 RVFVVGDLNIAPTAMDRCDADSDFEKNE 210