BLASTX nr result

ID: Cimicifuga21_contig00007619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007619
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPas...   162   5e-38
ref|NP_001142646.1| uncharacterized protein LOC100274928 [Zea ma...   161   1e-37
gb|ABB02648.1| unknown [Solanum tuberosum]                            160   2e-37
gb|ACF06631.1| 26S proteasome regulatory particle non-ATPase sub...   160   2e-37
dbj|BAB78487.1| 26S proteasome regulatory particle non-ATPase su...   160   2e-37

>ref|XP_002278975.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 7
           [Vitis vinifera] gi|297740235|emb|CBI30417.3| unnamed
           protein product [Vitis vinifera]
          Length = 310

 Score =  162 bits (411), Expect = 5e-38
 Identities = 80/84 (95%), Positives = 83/84 (98%)
 Frame = +3

Query: 3   VIDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHN 182
           V+DGKLPLNHEILYHLQDVFNLLPNLNVAELIKAF+VKTNDMMLVIYLSSLIRSVIALHN
Sbjct: 223 VVDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFAVKTNDMMLVIYLSSLIRSVIALHN 282

Query: 183 LINNKMLNKEHEKAEDAKPTAIPA 254
           LINNKMLNKEHEKAEDAKP A+PA
Sbjct: 283 LINNKMLNKEHEKAEDAKPAAVPA 306


>ref|NP_001142646.1| uncharacterized protein LOC100274928 [Zea mays]
           gi|242074672|ref|XP_002447272.1| hypothetical protein
           SORBIDRAFT_06g031700 [Sorghum bicolor]
           gi|194701744|gb|ACF84956.1| unknown [Zea mays]
           gi|195607808|gb|ACG25734.1| hypothetical protein [Zea
           mays] gi|195624790|gb|ACG34225.1| hypothetical protein
           [Zea mays] gi|241938455|gb|EES11600.1| hypothetical
           protein SORBIDRAFT_06g031700 [Sorghum bicolor]
           gi|414584968|tpg|DAA35539.1| TPA: hypothetical protein
           ZEAMMB73_768086 [Zea mays]
          Length = 310

 Score =  161 bits (408), Expect = 1e-37
 Identities = 81/87 (93%), Positives = 84/87 (96%)
 Frame = +3

Query: 3   VIDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHN 182
           VIDGKLPLNHEILYHLQDVFNLLPNLNV ELIKAF+VKTNDMMLVIYLSSLIRSVIALHN
Sbjct: 223 VIDGKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMMLVIYLSSLIRSVIALHN 282

Query: 183 LINNKMLNKEHEKAEDAKPTAIPAS*G 263
           LINNKMLNKEHEKAED+KPTAIP + G
Sbjct: 283 LINNKMLNKEHEKAEDSKPTAIPTAAG 309


>gb|ABB02648.1| unknown [Solanum tuberosum]
          Length = 309

 Score =  160 bits (406), Expect = 2e-37
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = +3

Query: 3   VIDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHN 182
           VIDGKLPLNHEILYHLQDVFNLLPNLNVAEL+K+FSVKTNDMMLVIYLSSLIRSVIALHN
Sbjct: 222 VIDGKLPLNHEILYHLQDVFNLLPNLNVAELVKSFSVKTNDMMLVIYLSSLIRSVIALHN 281

Query: 183 LINNKMLNKEHEKAEDAKPTAIPAS*G 263
           LINNKMLNKEHEKAED+KP A+P + G
Sbjct: 282 LINNKMLNKEHEKAEDSKPRAVPTTAG 308


>gb|ACF06631.1| 26S proteasome regulatory particle non-ATPase subunit 8 [Elaeis
           guineensis]
          Length = 310

 Score =  160 bits (406), Expect = 2e-37
 Identities = 78/87 (89%), Positives = 85/87 (97%)
 Frame = +3

Query: 3   VIDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHN 182
           VIDGKLPLNHEILYHLQDVFNLLPNLNV+EL+KAF+VKTNDMMLVIYLSSLIRSVIALHN
Sbjct: 223 VIDGKLPLNHEILYHLQDVFNLLPNLNVSELVKAFAVKTNDMMLVIYLSSLIRSVIALHN 282

Query: 183 LINNKMLNKEHEKAEDAKPTAIPAS*G 263
           LINNKMLNKEHEKAED+KPT +P++ G
Sbjct: 283 LINNKMLNKEHEKAEDSKPTVVPSAAG 309


>dbj|BAB78487.1| 26S proteasome regulatory particle non-ATPase subunit8 [Oryza
           sativa Japonica Group]
          Length = 310

 Score =  160 bits (405), Expect = 2e-37
 Identities = 80/87 (91%), Positives = 85/87 (97%)
 Frame = +3

Query: 3   VIDGKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHN 182
           VI+GKLPLNHEILYHLQDVFNLLPNLNV ELIKAF+VKTNDMMLVIYLSSLIRSVIALHN
Sbjct: 223 VIEGKLPLNHEILYHLQDVFNLLPNLNVNELIKAFAVKTNDMMLVIYLSSLIRSVIALHN 282

Query: 183 LINNKMLNKEHEKAEDAKPTAIPAS*G 263
           LINNKMLNKEHEKAED+KPTAIP++ G
Sbjct: 283 LINNKMLNKEHEKAEDSKPTAIPSAAG 309


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