BLASTX nr result

ID: Cimicifuga21_contig00007611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007611
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43300.1| unknown [Lotus japonicus]                               74   5e-11
ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane...    73   1e-10
gb|AFK34327.1| unknown [Lotus japonicus]                               72   3e-10
ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|2...    72   3e-10
ref|NP_001236425.1| uncharacterized protein LOC100306024 [Glycin...    70   8e-10

>gb|AFK43300.1| unknown [Lotus japonicus]
          Length = 236

 Score = 73.9 bits (180), Expect = 5e-11
 Identities = 33/50 (66%), Positives = 39/50 (78%)
 Frame = +3

Query: 456 VLVLAKGTSIPISFLAPLFLLHTPRSFISWIKGEYDIWIAFSALLVRLFF 605
           VL+LAKGT++P SF+ PLF L  P  FI+WIKG Y +W AF ALLVRLFF
Sbjct: 107 VLILAKGTTVPKSFIVPLFALQAPAGFIAWIKGSYGMWAAFLALLVRLFF 156


>ref|XP_004147401.1| PREDICTED: cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
           gi|449500602|ref|XP_004161143.1| PREDICTED:
           cold-regulated 413 inner membrane protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 224

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 36/50 (72%), Positives = 38/50 (76%)
 Frame = +3

Query: 456 VLVLAKGTSIPISFLAPLFLLHTPRSFISWIKGEYDIWIAFSALLVRLFF 605
           VL+LAKGT I  SF+ PLF L  P S ISWIKGEY IW AF ALLVRLFF
Sbjct: 94  VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF 143


>gb|AFK34327.1| unknown [Lotus japonicus]
          Length = 166

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +3

Query: 456 VLVLAKGTSIPISFLAPLFLLHTPRSFISWIKGEYDIWIAFSALLVRLFFL 608
           VL+LAKGT++P SF+ PLF L  P  FI+WIKG Y +W AF ALLVRL F+
Sbjct: 107 VLILAKGTTVPKSFIVPLFALQAPAGFIAWIKGSYGMWAAFLALLVRLSFI 157


>ref|XP_002331870.1| predicted protein [Populus trichocarpa] gi|222875388|gb|EEF12519.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 35/50 (70%), Positives = 38/50 (76%)
 Frame = +3

Query: 456 VLVLAKGTSIPISFLAPLFLLHTPRSFISWIKGEYDIWIAFSALLVRLFF 605
           VLVLAKGT++  SFL PLF L  P + ISWIKGEY IW AF ALL RLFF
Sbjct: 99  VLVLAKGTAVQKSFLVPLFALQAPPAVISWIKGEYGIWTAFLALLFRLFF 148


>ref|NP_001236425.1| uncharacterized protein LOC100306024 [Glycine max]
           gi|255627311|gb|ACU14000.1| unknown [Glycine max]
          Length = 218

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 456 VLVLAKGTSIPISFLAPLFLLHTPRSFISWIKGEYDIWIAFSALLVRLFF 605
           VL+LA+GT++P S++ PLF L  P   +SWIKG Y +W AF ALL+RLFF
Sbjct: 89  VLILARGTAVPKSYIVPLFALQAPAGVVSWIKGRYGVWTAFLALLIRLFF 138


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