BLASTX nr result

ID: Cimicifuga21_contig00007595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007595
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525583.1| hypothetical protein RCOM_0622510 [Ricinus c...   105   2e-20
ref|XP_002304824.1| predicted protein [Populus trichocarpa] gi|2...   100   9e-19
ref|XP_003598371.1| Serine/threonine protein kinase ATM [Medicag...    99   2e-18
ref|XP_002891443.1| hypothetical protein ARALYDRAFT_473993 [Arab...    62   3e-07
ref|NP_187194.1| PWWP domain-containing protein [Arabidopsis tha...    62   3e-07

>ref|XP_002525583.1| hypothetical protein RCOM_0622510 [Ricinus communis]
            gi|223535162|gb|EEF36842.1| hypothetical protein
            RCOM_0622510 [Ricinus communis]
          Length = 701

 Score =  105 bits (261), Expect = 2e-20
 Identities = 54/117 (46%), Positives = 76/117 (64%)
 Frame = -2

Query: 1006 KFPKDFKLPSKDELVKQFHPFGSIDYLKTKVFFYTGSAQLVFLNHLDAEAACNHAKSKKM 827
            KFP+DF LPS+ +L+++F  FG +D L+TK+F   GSAQ+VFL+HLDA  A  + K KK 
Sbjct: 584  KFPRDFSLPSQKDLIRKFSRFGKVDSLRTKIFTRLGSAQVVFLHHLDAVTAYQYLKRKKN 643

Query: 826  FLGGANVRFWLDKHEHSRRGSNTISAPLSLPTAESSKTNLKSCLRVSNPQRNKVERK 656
              G A + FWLD +E  RRGS  +   +SLP       NLKSCL+ S+ +  + ++K
Sbjct: 644  LFGEAKILFWLDPYEKKRRGSKFV---VSLP-------NLKSCLKKSDRKHGQEDKK 690


>ref|XP_002304824.1| predicted protein [Populus trichocarpa] gi|222842256|gb|EEE79803.1|
            predicted protein [Populus trichocarpa]
          Length = 926

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 56/123 (45%), Positives = 73/123 (59%)
 Frame = -2

Query: 1006 KFPKDFKLPSKDELVKQFHPFGSIDYLKTKVFFYTGSAQLVFLNHLDAEAACNHAKSKKM 827
            KFPKDF LPSK +L+++F  FG +D LKTKVF   GSAQ+VF   LDA AA  +AK K  
Sbjct: 808  KFPKDFNLPSKMDLIRKFSRFGRVDPLKTKVFQVMGSAQVVFFEELDAVAAYQYAKRKNN 867

Query: 826  FLGGANVRFWLDKHEHSRRGSNTISAPLSLPTAESSKTNLKSCLRVSNPQRNKVERKQLH 647
              G A V +WLD+    RRG N +S         SS +NLKS L+ S  +  +  ++   
Sbjct: 868  LYGVATVLYWLDRSGQKRRGPNFLS--------PSSSSNLKSSLKKSGRRGKEDNKRTRK 919

Query: 646  VKF 638
            V+F
Sbjct: 920  VRF 922


>ref|XP_003598371.1| Serine/threonine protein kinase ATM [Medicago truncatula]
            gi|355487419|gb|AES68622.1| Serine/threonine protein
            kinase ATM [Medicago truncatula]
          Length = 682

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 54/118 (45%), Positives = 74/118 (62%)
 Frame = -2

Query: 1006 KFPKDFKLPSKDELVKQFHPFGSIDYLKTKVFFYTGSAQLVFLNHLDAEAACNHAKSKKM 827
            KFPK+F LPSK+ L+K+F  FG++D   T+VF YTGSA++ F    DA AA   AK K  
Sbjct: 546  KFPKNFNLPSKEHLIKKFSVFGTVDSSNTRVFCYTGSARVAFFKESDAVAAYQFAKRKVQ 605

Query: 826  FLGGANVRFWLDKHEHSRRGSNTISAPLSLPTAESSKTNLKSCLRVSNPQRNKVERKQ 653
            F G AN+RFWLD  EH RR    +      P+A+ + + LKSCL+ SN  + +  +K+
Sbjct: 606  F-GEANIRFWLDPFEHKRRKLKNLYH--VHPSAKLTGSPLKSCLKKSNSLKQENIKKR 660


>ref|XP_002891443.1| hypothetical protein ARALYDRAFT_473993 [Arabidopsis lyrata subsp.
           lyrata] gi|297337285|gb|EFH67702.1| hypothetical protein
           ARALYDRAFT_473993 [Arabidopsis lyrata subsp. lyrata]
          Length = 643

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 41/116 (35%), Positives = 59/116 (50%)
 Frame = -2

Query: 985 LPSKDELVKQFHPFGSIDYLKTKVFFYTGSAQLVFLNHLDAEAACNHAKSKKMFLGGANV 806
           LPSK EL+K+F  FG ID  +T V     SA++VF+  +DA  A   A+SKK  LG + V
Sbjct: 523 LPSKAELLKRFSVFGKIDASRTDVNPGESSAKVVFVQSIDAVTAYQFARSKKFRLGRSKV 582

Query: 805 RFWLDKHEHSRRGSNTISAPLSLPTAESSKTNLKSCLRVSNPQRNKVERKQLHVKF 638
            + LD  E      N ++        + S  + KSCL+       +  R+ + VKF
Sbjct: 583 TYHLDPFEE----DNEVNKVPLAQKPQKSVPSPKSCLKEQGSVDKEEGRRNMKVKF 634


>ref|NP_187194.1| PWWP domain-containing protein [Arabidopsis thaliana]
            gi|7596768|gb|AAF64539.1| hypothetical protein
            [Arabidopsis thaliana] gi|225898619|dbj|BAH30440.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332640719|gb|AEE74240.1| PWWP domain-containing
            protein [Arabidopsis thaliana]
          Length = 965

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 31/218 (14%)
 Frame = -2

Query: 1003 FPKDFKLPSKDELVKQFHPFGSIDYLKTKVFFYTGSAQLVFLNHLDAEAACNHAKSKKMF 824
            FP    LPS D L  +F  FG +D    +V + +   ++ FL  LDA+ A  +    K  
Sbjct: 749  FPPGESLPSIDLLKARFGRFGQLDQSAIRVSWKSSICRVGFLYKLDAQTALRYVSGSKSL 808

Query: 823  LGGANVRFWL-DKHEHSRRGSN------------TISAPLS-----LPTAESSKTNLKSC 698
             G  NV ++L D    S  G +             I+ PL+      P        LKSC
Sbjct: 809  FGNVNVTYFLRDMKASSASGDHELKKAKRPKTDKPITKPLNQLLEQAPPVHQPNIQLKSC 868

Query: 697  LRVSNPQRNKVERKQLHVKF---------PSANQDLPCATIETK----HTVFTESDSCMY 557
            L+     RN    + + VKF         P +   LP ++ +++    +      +  + 
Sbjct: 869  LKKPGNNRNG-NHRTVRVKFMLGEKETESPFSVSILPLSSQDSEPKPVNNQVDHVEPPLD 927

Query: 556  SKKVGPDVSSQMFVLLEKCNQMVTTIKANLGLQSYYSL 443
              ++  D+S QM  LL +CN  V  +   LG   Y+SL
Sbjct: 928  PSQLKVDISLQMMELLTRCNDAVANVTGLLGYVPYHSL 965


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