BLASTX nr result

ID: Cimicifuga21_contig00007571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007571
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284954.1| PREDICTED: uncharacterized protein LOC100257...   215   1e-53
ref|XP_002510176.1| conserved hypothetical protein [Ricinus comm...   212   1e-52
emb|CBI19483.3| unnamed protein product [Vitis vinifera]              209   6e-52
ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-47
ref|XP_003544470.1| PREDICTED: uncharacterized protein LOC100786...   195   1e-47

>ref|XP_002284954.1| PREDICTED: uncharacterized protein LOC100257564 [Vitis vinifera]
          Length = 190

 Score =  215 bits (548), Expect = 1e-53
 Identities = 111/171 (64%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
 Frame = +1

Query: 136 MNTNTSDMMDTEMEIP-RNENENVRGLLSLARQLINQGKPSLALQAVVMAMKSDGGDEAV 312
           M+   S+MMDTE      N+N+ V+ LLSLARQLIN+GKPS ALQ VVMAM++ GGDEA+
Sbjct: 24  MDREDSEMMDTETAASGTNQNDVVKDLLSLARQLINEGKPSQALQTVVMAMRTRGGDEAI 83

Query: 313 FQTLHRARELYRNRLQANTAADELASLFAECAIAEAHHPLEXXXXXXXXXXXXXXXLTPD 492
           FQ+LHRARELYRNRLQAN AAD+LA LFAECAIAE    +E               + PD
Sbjct: 84  FQSLHRARELYRNRLQANAAADQLACLFAECAIAE----VEPCNAEPSPHDVVSPSIAPD 139

Query: 493 ARGTSILAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRRDEHLAYWCCQL 645
           +  TSILA++GR+QI+LDAFSDGSSFICLQCGGLVSNHR+DEH AYWCC++
Sbjct: 140 SNETSILAETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCCKI 190


>ref|XP_002510176.1| conserved hypothetical protein [Ricinus communis]
           gi|223550877|gb|EEF52363.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  212 bits (539), Expect = 1e-52
 Identities = 111/166 (66%), Positives = 127/166 (76%), Gaps = 2/166 (1%)
 Frame = +1

Query: 154 DMMDTEMEIPRN--ENENVRGLLSLARQLINQGKPSLALQAVVMAMKSDGGDEAVFQTLH 327
           D  DTEM    +  +N+ VR LL+LARQLINQGKP+ ALQAVVMAM++ GGDEAVFQ+LH
Sbjct: 6   DGTDTEMTERESVPQNDAVRELLALARQLINQGKPTQALQAVVMAMRTKGGDEAVFQSLH 65

Query: 328 RARELYRNRLQANTAADELASLFAECAIAEAHHPLEXXXXXXXXXXXXXXXLTPDARGTS 507
           RARELYRNR+Q NTA D+LASLFAECAI EA    +               +TPDA G S
Sbjct: 66  RARELYRNRVQENTAVDQLASLFAECAIVEA----QPSKSEPSAHNVGGPSVTPDAHGNS 121

Query: 508 ILAKSGRQQIMLDAFSDGSSFICLQCGGLVSNHRRDEHLAYWCCQL 645
           ILA++GR QI+LDAFSDGSSFICLQCGGLVSNHRRDEH AYWCC +
Sbjct: 122 ILAETGRMQIVLDAFSDGSSFICLQCGGLVSNHRRDEHYAYWCCNI 167


>emb|CBI19483.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  209 bits (533), Expect = 6e-52
 Identities = 108/163 (66%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
 Frame = +1

Query: 160 MDTEMEIP-RNENENVRGLLSLARQLINQGKPSLALQAVVMAMKSDGGDEAVFQTLHRAR 336
           MDTE      N+N+ V+ LLSLARQLIN+GKPS ALQ VVMAM++ GGDEA+FQ+LHRAR
Sbjct: 1   MDTETAASGTNQNDVVKDLLSLARQLINEGKPSQALQTVVMAMRTRGGDEAIFQSLHRAR 60

Query: 337 ELYRNRLQANTAADELASLFAECAIAEAHHPLEXXXXXXXXXXXXXXXLTPDARGTSILA 516
           ELYRNRLQAN AAD+LA LFAECAIAE    +E               + PD+  TSILA
Sbjct: 61  ELYRNRLQANAAADQLACLFAECAIAE----VEPCNAEPSPHDVVSPSIAPDSNETSILA 116

Query: 517 KSGRQQIMLDAFSDGSSFICLQCGGLVSNHRRDEHLAYWCCQL 645
           ++GR+QI+LDAFSDGSSFICLQCGGLVSNHR+DEH AYWCC++
Sbjct: 117 ETGRRQIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWCCKI 159


>ref|XP_002327171.1| predicted protein [Populus trichocarpa] gi|222835486|gb|EEE73921.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  196 bits (497), Expect = 1e-47
 Identities = 104/155 (67%), Positives = 119/155 (76%)
 Frame = +1

Query: 172 MEIPRNENENVRGLLSLARQLINQGKPSLALQAVVMAMKSDGGDEAVFQTLHRARELYRN 351
           +++P ++N NVRGLL+LARQLI+QGKPS ALQAVVMAM++ GGD+AVFQ+LHRARELY N
Sbjct: 24  LQVP-DDNNNVRGLLTLARQLISQGKPSQALQAVVMAMRTKGGDQAVFQSLHRARELYLN 82

Query: 352 RLQANTAADELASLFAECAIAEAHHPLEXXXXXXXXXXXXXXXLTPDARGTSILAKSGRQ 531
           RLQ NTA D LASLFAECAIAEA   L                   D    SILA++GR 
Sbjct: 83  RLQENTAVDHLASLFAECAIAEAQPFL--AEQTPLNVGASSRSAESDVHVHSILAETGRT 140

Query: 532 QIMLDAFSDGSSFICLQCGGLVSNHRRDEHLAYWC 636
           QI+LDAFSDGSSFICLQCGGLVSNHR+DEH AYWC
Sbjct: 141 QIVLDAFSDGSSFICLQCGGLVSNHRKDEHYAYWC 175


>ref|XP_003544470.1| PREDICTED: uncharacterized protein LOC100786549 [Glycine max]
          Length = 175

 Score =  195 bits (496), Expect = 1e-47
 Identities = 101/150 (67%), Positives = 116/150 (77%)
 Frame = +1

Query: 190 ENENVRGLLSLARQLINQGKPSLALQAVVMAMKSDGGDEAVFQTLHRARELYRNRLQANT 369
           + + VR LL+LARQLI QGKPS ALQAVV+AMK+ GGDEAVFQ+LHRARE+YR+RLQ N 
Sbjct: 28  QTDVVRDLLTLARQLITQGKPSQALQAVVVAMKTRGGDEAVFQSLHRAREVYRSRLQENA 87

Query: 370 AADELASLFAECAIAEAHHPLEXXXXXXXXXXXXXXXLTPDARGTSILAKSGRQQIMLDA 549
           A D+LASLFAECAIAEA   +                  PDA GTSILA+SGR Q++LDA
Sbjct: 88  AVDQLASLFAECAIAEAQPVV--IEPPANNITNPSITPEPDAHGTSILAESGRMQVVLDA 145

Query: 550 FSDGSSFICLQCGGLVSNHRRDEHLAYWCC 639
            SDGSSFICL+CGGLVSNHR+DEH AYWCC
Sbjct: 146 VSDGSSFICLKCGGLVSNHRKDEHYAYWCC 175


Top