BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007542
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   191   3e-46
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   189   1e-45
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   189   1e-45
gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]     187   4e-45
ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...   187   7e-45

>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  191 bits (485), Expect = 3e-46
 Identities = 99/128 (77%), Positives = 105/128 (82%)
 Frame = -1

Query: 824 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLESASERVIVGDL 645
           MSWAGPEDI+LSTSLASY                GILRSFDQFAN VLE A ERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 644 YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAEEIKIAQKAEKDATDLKGSMRK 465
           YCDIPLGLY+IRGENVVLIGELDLE+EELP HMTRVSA EI+ AQKAE+DATDLKG+MRK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 464 RMEFLDFD 441
           RMEFLD D
Sbjct: 121 RMEFLDLD 128


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
          Length = 128

 Score =  189 bits (481), Expect = 1e-45
 Identities = 99/128 (77%), Positives = 104/128 (81%)
 Frame = -1

Query: 824 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLESASERVIVGDL 645
           MSWAGPEDI+LSTSLASY                G LRSFDQFAN VLE A ERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 644 YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAEEIKIAQKAEKDATDLKGSMRK 465
           YCDIPLGLYVIRGENVVLIGELDLEREELP HMTRVS  EIK AQKAE++A+DLKG+MRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 464 RMEFLDFD 441
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  189 bits (481), Expect = 1e-45
 Identities = 99/128 (77%), Positives = 105/128 (82%)
 Frame = -1

Query: 824 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLESASERVIVGDL 645
           MSWAGPEDI+LSTSLASY                GILRSFDQFAN VLE A ERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 644 YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAEEIKIAQKAEKDATDLKGSMRK 465
           YCDIPLGLYVIRGENVVLIGELDLE+EELP HMTRVSA EIK AQKAE++A+DLKG+MRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 464 RMEFLDFD 441
           RMEFLD D
Sbjct: 121 RMEFLDLD 128


>gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
          Length = 128

 Score =  187 bits (476), Expect = 4e-45
 Identities = 99/128 (77%), Positives = 103/128 (80%)
 Frame = -1

Query: 824 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLESASERVIVGDL 645
           MSWA PEDI LSTSLA+Y                G+LRSFDQFANVVLE A ER+IVGDL
Sbjct: 1   MSWASPEDISLSTSLATYLDKKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDL 60

Query: 644 YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAEEIKIAQKAEKDATDLKGSMRK 465
           YCDIPLGLYVIRGENVVLIGELDLE+EELP HMT VS EEIK AQKAEKDAT LKGSMRK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTHVSTEEIKRAQKAEKDATVLKGSMRK 120

Query: 464 RMEFLDFD 441
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128


>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  187 bits (474), Expect = 7e-45
 Identities = 99/128 (77%), Positives = 105/128 (82%)
 Frame = -1

Query: 824 MSWAGPEDIFLSTSLASYXXXXXXXXXXXXXXXXGILRSFDQFANVVLESASERVIVGDL 645
           MSWAGP+DIFLSTSLA+Y                GILRSFDQFANVVLE A ERVIVGDL
Sbjct: 1   MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDL 60

Query: 644 YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTRVSAEEIKIAQKAEKDATDLKGSMRK 465
           YCDI LGLYVIRGENVVLIGELDLE+EELP+HMT VS  EIK AQKAE++ATDLKGSMRK
Sbjct: 61  YCDILLGLYVIRGENVVLIGELDLEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSMRK 120

Query: 464 RMEFLDFD 441
           RMEFLDFD
Sbjct: 121 RMEFLDFD 128