BLASTX nr result

ID: Cimicifuga21_contig00007518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007518
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528315.1| PREDICTED: uncharacterized protein LOC100775...   337   2e-90
ref|XP_002266079.2| PREDICTED: uncharacterized protein LOC100242...   336   6e-90
ref|XP_003531718.1| PREDICTED: uncharacterized protein LOC100790...   334   2e-89
ref|XP_002327418.1| predicted protein [Populus trichocarpa] gi|2...   329   7e-88
ref|XP_002517643.1| conserved hypothetical protein [Ricinus comm...   327   3e-87

>ref|XP_003528315.1| PREDICTED: uncharacterized protein LOC100775686 [Glycine max]
          Length = 279

 Score =  337 bits (865), Expect = 2e-90
 Identities = 161/214 (75%), Positives = 179/214 (83%)
 Frame = +3

Query: 189 DASILSWSLRDVSGFAKHHPIPLVXXXXXXXXXXVEYTLFMIPPSSPPFDLGFVLTRPIH 368
           DAS + W++ D    A HH +P +          VEYTL M+PPSSPPFDLGF+ TR +H
Sbjct: 40  DASFMKWTVADAVHVATHHWMPCLFALGLLFFMAVEYTLLMVPPSSPPFDLGFIATRSLH 99

Query: 369 RILASEQVLNTVLAGLNTVFVGMQTTYILWTWLVEGRARATIAAIFMFTCRGILGYSTQL 548
            +L S   LNT+ AGLNTVFVGMQT+YILWTWL+EGR RATI+A+FMFTCRGILGYSTQL
Sbjct: 100 ALLESSPNLNTLFAGLNTVFVGMQTSYILWTWLIEGRPRATISALFMFTCRGILGYSTQL 159

Query: 549 PLPEGFLGSGADFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWEMAWVFDTLNVLQMVR 728
           PLP+GFLGSG DFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWE+AW FD LNVLQ VR
Sbjct: 160 PLPQGFLGSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTFDVLNVLQAVR 219

Query: 729 LLGTRGHYTIDLAVGVGAGLLFDSLAGKYEEKKR 830
           LLGTRGHYTIDLAVGVGAG+LFDSLAGKYE+ KR
Sbjct: 220 LLGTRGHYTIDLAVGVGAGILFDSLAGKYEDSKR 253


>ref|XP_002266079.2| PREDICTED: uncharacterized protein LOC100242207 [Vitis vinifera]
          Length = 281

 Score =  336 bits (861), Expect = 6e-90
 Identities = 166/232 (71%), Positives = 185/232 (79%)
 Frame = +3

Query: 135 PTTTMSKKQNTNPMSQIGDASILSWSLRDVSGFAKHHPIPLVXXXXXXXXXXVEYTLFMI 314
           P     KK+  N       AS ++WS+ D  G  + HP+P V          VEYTL M+
Sbjct: 37  PAEMKQKKKTANGFWS--KASFMNWSMDDAVGLFRFHPMPCVFAVSLLFFMGVEYTLRMV 94

Query: 315 PPSSPPFDLGFVLTRPIHRILASEQVLNTVLAGLNTVFVGMQTTYILWTWLVEGRARATI 494
           P SSPPFDLGFV T  +HRILAS   LNT+LAGLNTVFVGMQTTYI+WTW+VEGR RATI
Sbjct: 95  PSSSPPFDLGFVATEWLHRILASSPDLNTLLAGLNTVFVGMQTTYIIWTWMVEGRPRATI 154

Query: 495 AAIFMFTCRGILGYSTQLPLPEGFLGSGADFPVGNVSFFLFFSGHVAGSVIASLDMRRMQ 674
           +A+FMFTCRGILGYSTQLP+P+GFLGSG DFPVGNVSFFLFFSGHVAGSVIASLDMRRM+
Sbjct: 155 SALFMFTCRGILGYSTQLPVPQGFLGSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMK 214

Query: 675 RWEMAWVFDTLNVLQMVRLLGTRGHYTIDLAVGVGAGLLFDSLAGKYEEKKR 830
           RW MAW FD LN+LQ VRLLGTRGHYTIDLAVG+GAG+LFDSLAGKYEE KR
Sbjct: 215 RWGMAWTFDVLNILQGVRLLGTRGHYTIDLAVGIGAGVLFDSLAGKYEEGKR 266


>ref|XP_003531718.1| PREDICTED: uncharacterized protein LOC100790665 [Glycine max]
          Length = 267

 Score =  334 bits (857), Expect = 2e-89
 Identities = 168/260 (64%), Positives = 193/260 (74%), Gaps = 1/260 (0%)
 Frame = +3

Query: 54  MNGNGNSNLRNRPVN-ISTVDLIKDPPKPTTTMSKKQNTNPMSQIGDASILSWSLRDVSG 230
           MNG   ++L +R  +  +  D  K        M K  ++        AS + W++ D   
Sbjct: 1   MNGGAEASLNHRRKHQTAPADGAKGVKVANGAMGKPSSSKHSC---GASFMKWTVADAVH 57

Query: 231 FAKHHPIPLVXXXXXXXXXXVEYTLFMIPPSSPPFDLGFVLTRPIHRILASEQVLNTVLA 410
              HH +P +          VEYTL M+PPSSPPFDLGF+ TR +H +L S   LNT+ A
Sbjct: 58  VVTHHWMPCLFALGLLFFMAVEYTLLMVPPSSPPFDLGFIATRSLHALLESSPNLNTLFA 117

Query: 411 GLNTVFVGMQTTYILWTWLVEGRARATIAAIFMFTCRGILGYSTQLPLPEGFLGSGADFP 590
           GLNTVFVGMQT+YILWTWL+EGR RATI+A+FMFTCRGILGYSTQLPLP+GFLGSG DFP
Sbjct: 118 GLNTVFVGMQTSYILWTWLIEGRPRATISALFMFTCRGILGYSTQLPLPQGFLGSGVDFP 177

Query: 591 VGNVSFFLFFSGHVAGSVIASLDMRRMQRWEMAWVFDTLNVLQMVRLLGTRGHYTIDLAV 770
           VGNVSFFLFFSGHVAGSVIASLDMRRMQRWE+AW FD LNVLQ VRLLGTRGHYTIDLAV
Sbjct: 178 VGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTFDVLNVLQAVRLLGTRGHYTIDLAV 237

Query: 771 GVGAGLLFDSLAGKYEEKKR 830
           GVGAG+LFDSLAGKYE+ KR
Sbjct: 238 GVGAGILFDSLAGKYEDSKR 257


>ref|XP_002327418.1| predicted protein [Populus trichocarpa] gi|222835972|gb|EEE74393.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  329 bits (843), Expect = 7e-88
 Identities = 170/245 (69%), Positives = 191/245 (77%), Gaps = 8/245 (3%)
 Frame = +3

Query: 150 SKKQNTNPMSQIG--------DASILSWSLRDVSGFAKHHPIPLVXXXXXXXXXXVEYTL 305
           +K + TN ++  G        D S L W+LRDV   AKHH +P            VEYTL
Sbjct: 3   NKNKQTNGITTDGAANGFYGVDPSFLKWTLRDVVNVAKHHWLPCFLGFGLLFFMAVEYTL 62

Query: 306 FMIPPSSPPFDLGFVLTRPIHRILASEQVLNTVLAGLNTVFVGMQTTYILWTWLVEGRAR 485
            M+P SSPPFDLGFV+TR +H +L+S   LNT LAGLNTVFVGMQT YILWTWLVEGR R
Sbjct: 63  RMVPSSSPPFDLGFVVTRRLHGLLSSWPELNTSLAGLNTVFVGMQTAYILWTWLVEGRPR 122

Query: 486 ATIAAIFMFTCRGILGYSTQLPLPEGFLGSGADFPVGNVSFFLFFSGHVAGSVIASLDMR 665
           ATI+A+FMFTCRGILG+STQLPLPE FLGSGADFPVGNVSFFLFFSGHVAGS+IASLDMR
Sbjct: 123 ATISALFMFTCRGILGFSTQLPLPEEFLGSGADFPVGNVSFFLFFSGHVAGSLIASLDMR 182

Query: 666 RMQRWEMAWVFDTLNVLQMVRLLGTRGHYTIDLAVGVGAGLLFDSLAGKYEEKKRGEFHQ 845
           RMQRWE+A  FD LNVLQ++RLLGTRGHYTIDLAVGVGAG+LFDSLAGKY E K     Q
Sbjct: 183 RMQRWELARAFDLLNVLQVIRLLGTRGHYTIDLAVGVGAGVLFDSLAGKYVEWK-----Q 237

Query: 846 AKPVS 860
            KP++
Sbjct: 238 RKPIA 242


>ref|XP_002517643.1| conserved hypothetical protein [Ricinus communis]
           gi|223543275|gb|EEF44807.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  327 bits (837), Expect = 3e-87
 Identities = 162/224 (72%), Positives = 179/224 (79%)
 Frame = +3

Query: 189 DASILSWSLRDVSGFAKHHPIPLVXXXXXXXXXXVEYTLFMIPPSSPPFDLGFVLTRPIH 368
           D S + W+  DV    K H +P V          VEYTL M+P SSPPFDLGF++TR +H
Sbjct: 59  DPSFMKWTTHDVVNVVKFHWLPCVFGLGLLFFMAVEYTLRMVPASSPPFDLGFLVTRHLH 118

Query: 369 RILASEQVLNTVLAGLNTVFVGMQTTYILWTWLVEGRARATIAAIFMFTCRGILGYSTQL 548
            +L+S   LNT+LA LNTVFV MQT YILWTWL+EGR RATI+A+FMFTCRGILGYSTQL
Sbjct: 119 LLLSSWPALNTLLAFLNTVFVLMQTAYILWTWLIEGRPRATISALFMFTCRGILGYSTQL 178

Query: 549 PLPEGFLGSGADFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWEMAWVFDTLNVLQMVR 728
           PLPEGFLGSG DFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWE+AW +D LNVLQ VR
Sbjct: 179 PLPEGFLGSGVDFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWELAWTYDVLNVLQAVR 238

Query: 729 LLGTRGHYTIDLAVGVGAGLLFDSLAGKYEEKKRGEFHQAKPVS 860
           LLGTRGHYTIDLA GVGAG+LFDSLAGKYEE KR +   AK  S
Sbjct: 239 LLGTRGHYTIDLATGVGAGILFDSLAGKYEESKRKQAVVAKESS 282


Top