BLASTX nr result

ID: Cimicifuga21_contig00007480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007480
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46375.1| unknown [Medicago truncatula]                           57   4e-06
ref|XP_003604142.1| RNA-binding protein with multiple splicing [...    57   4e-06
emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]               57   4e-06
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...    56   8e-06
ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817...    56   1e-05

>gb|AFK46375.1| unknown [Medicago truncatula]
          Length = 314

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 393 LQDMVFDPESKSVLHTEMAKKNFFVKRGVAS 301
           LQDM+FDPE+KSVLHTEMAKKN FVKRG+ +
Sbjct: 93  LQDMLFDPEAKSVLHTEMAKKNLFVKRGIGA 123


>ref|XP_003604142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355505197|gb|AES86339.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 311

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 393 LQDMVFDPESKSVLHTEMAKKNFFVKRGVAS 301
           LQDM+FDPE+KSVLHTEMAKKN FVKRG+ +
Sbjct: 93  LQDMLFDPEAKSVLHTEMAKKNLFVKRGIGA 123


>emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
          Length = 284

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = -3

Query: 393 LQDMVFDPESKSVLHTEMAKKNFFVKRGVAS 301
           LQDM+FDP+SKSVLHTEMAKKN FVKRG+ +
Sbjct: 62  LQDMLFDPDSKSVLHTEMAKKNLFVKRGIGA 92


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
           small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -3

Query: 393 LQDMVFDPESKSVLHTEMAKKNFFVKRGVAS 301
           LQDMVFD ESKSVLHTEMAKKN FVKRG+ +
Sbjct: 114 LQDMVFDAESKSVLHTEMAKKNLFVKRGIVA 144


>ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
          Length = 318

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = -3

Query: 393 LQDMVFDPESKSVLHTEMAKKNFFVKRGVAS 301
           LQDM+FDP++KSVLHTEMAKKN FVKRG+ +
Sbjct: 97  LQDMLFDPDTKSVLHTEMAKKNLFVKRGIGA 127


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