BLASTX nr result

ID: Cimicifuga21_contig00007475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007475
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF26091.1|AC012393_17 low temperature and salt responsive pr...    84   1e-14
gb|AFC41201.1| PM-YC3.6-Lti6b [Binary expression vector PM-YC3.6...    84   1e-14
ref|XP_002884539.1| low temperature and salt responsive protein ...    84   1e-14
ref|NP_187240.1| Hydrophobic protein RCI2B [Arabidopsis thaliana...    84   1e-14
ref|XP_003626135.1| Hydrophobic protein LTI6B [Medicago truncatu...    83   2e-14

>gb|AAF26091.1|AC012393_17 low temperature and salt responsive protein LTI6B [Arabidopsis
           thaliana]
          Length = 67

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = -3

Query: 284 LPPLGVFLRFGCQVEFWICLLLTLFGYLPGILYAIYIITK 165
           LPPLGVFL+FGC+VEFWICL+LTLFGYLPGILYA+YIITK
Sbjct: 15  LPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54


>gb|AFC41201.1| PM-YC3.6-Lti6b [Binary expression vector PM-YC3.6-LTI6b]
          Length = 726

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = -3

Query: 284 LPPLGVFLRFGCQVEFWICLLLTLFGYLPGILYAIYIITK 165
           LPPLGVFL+FGC+VEFWICL+LTLFGYLPGILYA+YIITK
Sbjct: 687 LPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 726


>ref|XP_002884539.1| low temperature and salt responsive protein LTI6B [Arabidopsis
           lyrata subsp. lyrata] gi|297330379|gb|EFH60798.1| low
           temperature and salt responsive protein LTI6B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 67

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = -3

Query: 284 LPPLGVFLRFGCQVEFWICLLLTLFGYLPGILYAIYIITK 165
           LPPLGVFL+FGC+VEFWICL+LTLFGYLPGILYA+YIITK
Sbjct: 15  LPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54


>ref|NP_187240.1| Hydrophobic protein RCI2B [Arabidopsis thaliana]
           gi|15214252|sp|Q9ZNS6.1|RCI2B_ARATH RecName:
           Full=Hydrophobic protein RCI2B; AltName: Full=Low
           temperature and salt-responsive protein LTI6B
           gi|6671968|gb|AAF23227.1|AC013454_14 low temperature and
           salt responsive protein (LTI6B) [Arabidopsis thaliana]
           gi|13957673|gb|AAK50618.1|AF264749_1 hydrophobic protein
           RCI2B [Arabidopsis thaliana] gi|4039152|gb|AAC97511.1|
           low temperature and salt responsive protein LTI6B
           [Arabidopsis thaliana] gi|4325219|gb|AAD17303.1|
           hydrophobic protein [Arabidopsis thaliana]
           gi|21536934|gb|AAM61275.1| hydrophobic protein RCI2B
           (Low temperature and salt responsive protein LTI6B)
           [Arabidopsis thaliana] gi|51970648|dbj|BAD44016.1| low
           temperature and salt responsive protein LTI6B
           [Arabidopsis thaliana] gi|109134195|gb|ABG25095.1|
           At3g05890 [Arabidopsis thaliana]
           gi|110737346|dbj|BAF00618.1| low temperature and salt
           responsive protein LTI6B [Arabidopsis thaliana]
           gi|332640791|gb|AEE74312.1| Hydrophobic protein RCI2B
           [Arabidopsis thaliana]
          Length = 54

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/40 (90%), Positives = 40/40 (100%)
 Frame = -3

Query: 284 LPPLGVFLRFGCQVEFWICLLLTLFGYLPGILYAIYIITK 165
           LPPLGVFL+FGC+VEFWICL+LTLFGYLPGILYA+YIITK
Sbjct: 15  LPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54


>ref|XP_003626135.1| Hydrophobic protein LTI6B [Medicago truncatula]
           gi|355501150|gb|AES82353.1| Hydrophobic protein LTI6B
           [Medicago truncatula]
          Length = 83

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -3

Query: 284 LPPLGVFLRFGCQVEFWICLLLTLFGYLPGILYAIYIITK*TLH 153
           LPPLGVFL+FGC VEFW+CL+LTLFGYLPGILYAIY ITK  +H
Sbjct: 15  LPPLGVFLKFGCHVEFWLCLVLTLFGYLPGILYAIYAITKWIIH 58


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