BLASTX nr result

ID: Cimicifuga21_contig00007450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007450
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB62634.1| putative protein [Arabidopsis thaliana]                77   5e-12
ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [...    76   9e-12
ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    74   6e-11
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    74   6e-11
ref|XP_002531573.1| set domain protein, putative [Ricinus commun...    73   1e-10

>emb|CAB62634.1| putative protein [Arabidopsis thaliana]
          Length = 1247

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
 Frame = -3

Query: 681 WLYNDPLGKNQGPFSLDQLRKWSLGGHFPKNLKVWRAEGNLSDSELLIDVIMGRIVK--- 511
           W Y DP GK QGPFS+ QLR+W   GHFP  L++WRA  N  +S LL D + GR  K   
Sbjct: 674 WHYRDPTGKTQGPFSMVQLRRWKFSGHFPPYLRIWRAHENQDESVLLTDALAGRFDKATT 733

Query: 510 --PYSEVQREIEVSPRDLHR 457
               S + +E++ SP D  R
Sbjct: 734 LPSSSSLPQELKPSPHDSGR 753


>ref|NP_190681.6| zinc finger CCCH domain-containing protein 44 [Arabidopsis
           thaliana] gi|334302924|sp|Q9SD34.3|C3H44_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 44;
           Short=AtC3H44 gi|332645232|gb|AEE78753.1| zinc finger
           CCCH domain-containing protein 44 [Arabidopsis thaliana]
          Length = 1292

 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
 Frame = -3

Query: 681 WLYNDPLGKNQGPFSLDQLRKWSLGGHFPKNLKVWRAEGNLSDSELLIDVIMGRIVK--- 511
           W Y DP GK QGPFS+ QLR+W   GHFP  L++WRA  N  +S LL D + GR  K   
Sbjct: 719 WHYRDPTGKTQGPFSMVQLRRWKSSGHFPPYLRIWRAHENQDESVLLTDALAGRFDKATT 778

Query: 510 --PYSEVQREIEVSPRDLHR 457
               S + +E++ SP D  R
Sbjct: 779 LPSSSSLPQELKPSPHDSGR 798


>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)
 Frame = -3

Query: 681  WLYNDPLGKNQGPFSLDQLRKWSLGGHFPKNLKVWRAEGNLSDSELLIDVIMGRIVKPYS 502
            W Y DP GK QGPFS+ QLRKWS  G+FP +L++WR      DS LL DV+ G+I K   
Sbjct: 895  WHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKDTP 954

Query: 501  EVQREIEVSP 472
                 ++V P
Sbjct: 955  LTSNSLQVHP 964


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 34/70 (48%), Positives = 43/70 (61%)
 Frame = -3

Query: 681  WLYNDPLGKNQGPFSLDQLRKWSLGGHFPKNLKVWRAEGNLSDSELLIDVIMGRIVKPYS 502
            W Y DP GK QGPFS+ QLRKWS  G+FP +L++WR      DS LL DV+ G+I K   
Sbjct: 895  WHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAGKISKDTP 954

Query: 501  EVQREIEVSP 472
                 ++V P
Sbjct: 955  LTSNSLQVHP 964


>ref|XP_002531573.1| set domain protein, putative [Ricinus communis]
            gi|223528803|gb|EEF30809.1| set domain protein, putative
            [Ricinus communis]
          Length = 1058

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 33/57 (57%), Positives = 38/57 (66%)
 Frame = -3

Query: 681  WLYNDPLGKNQGPFSLDQLRKWSLGGHFPKNLKVWRAEGNLSDSELLIDVIMGRIVK 511
            WLY DP GK QGPFS+ QLRKWS  GHFP + +VWR      DS LL D + GR+ K
Sbjct: 1000 WLYQDPSGKIQGPFSIVQLRKWSSKGHFPPHFRVWRTGEKQDDSILLTDALDGRVPK 1056


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