BLASTX nr result

ID: Cimicifuga21_contig00007445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00007445
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...    74   2e-11
ref|XP_002523770.1| conserved hypothetical protein [Ricinus comm...    64   3e-08
ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-08
ref|XP_002319389.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
ref|XP_002326105.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
 Frame = -1

Query: 603 SRSNSLELKQISNNLFESSKQSKTKEITRNRASSSSTNGXXXXXXXXXXLIFWGRLCAIV 424
           SR++    K+ +  L  S +   T +  +N  +     G          ++FWGRLCAI+
Sbjct: 138 SRASPASAKRQARRLSSSMQAQTTPKKAQN--AYDPVVGMSVLVVTLVIMLFWGRLCAIL 195

Query: 423 CTSTWIYFGPIRRKC-----EDEEVMVTKAEGEELEMGSREYKKRVIMEGILERNH 271
           CTS W+Y  P  RK      +DE++  TK+  +E+++ S EYKK+VIMEG+L RNH
Sbjct: 196 CTSAWLYCTPRFRKSGGYVNDDEDLQTTKS--KEVDLDSEEYKKKVIMEGLLGRNH 249


>ref|XP_002523770.1| conserved hypothetical protein [Ricinus communis]
           gi|223536982|gb|EEF38619.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
 Frame = -1

Query: 600 RSNSLELKQISNNLFESSKQSKTKEITRNRASSSSTN---GXXXXXXXXXXLIFWGRLCA 430
           +S SL+   I +   E S+    K+  +N       +   G          ++ WGRLCA
Sbjct: 168 QSTSLQAATIQHKQPEKSRVIAKKDRRKNEMIGKGFDPVIGMSIVMVTLIIMLLWGRLCA 227

Query: 429 IVCTSTWIYFGPIRRKCEDEEVMVTKAEGEELEMGSREYKKRVIMEGILERNH 271
           I+CT  W+YF   R K +     + K  GE  +  S EYKKRV++EG LER+H
Sbjct: 228 ILCTCAWLYF-TRRLKTDMSPRQIEKIRGEP-DFSSDEYKKRVVLEGFLERDH 278


>ref|XP_002330418.1| predicted protein [Populus trichocarpa] gi|222871803|gb|EEF08934.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = -1

Query: 594 NSLELKQISNNLFESSKQSKTKE--ITRNRASSSSTNGXXXXXXXXXXLIFWGRLCAIVC 421
           NS  L   S +   +S + K K+  +  N    +ST G          L+ WG++CAI+C
Sbjct: 180 NSRSLSDTSRSFRSNSSEFKPKQDNMQGNGKGHTSTIGLCLVLVSLMVLVLWGKVCAILC 239

Query: 420 TSTWIYFGPIRRKCEDEEVMVTKAEGEELEMGSREYKKRVIMEGILERNHS 268
           TSTW++  P   K     +     + E ++  S+EYKK +IMEG+LER+ +
Sbjct: 240 TSTWLFLVPRCSKARINNLSQKILDYEGID--SKEYKKMIIMEGLLERSRN 288


>ref|XP_002319389.1| predicted protein [Populus trichocarpa] gi|222857765|gb|EEE95312.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
 Frame = -1

Query: 585 ELKQISNNLFESSKQSKTKEITRN-------RASSSSTNGXXXXXXXXXXLIFWGRLCAI 427
           E+    +++ ES K SK K  +RN       +A +   +G           + WG+LCAI
Sbjct: 155 EVTSCPSSISESRKLSKIKN-SRNPNQELEFKAKTMDKSGIYLFLISLTVTVLWGKLCAI 213

Query: 426 VCTSTWIYFGPIRRKCEDEEVMVTKA----EGEELEMGSREYKKRVIMEGILERNHSR 265
             T  W+YF P R+        VT++    E EE +     YKK+VIMEG+LERNH R
Sbjct: 214 FFTIIWLYFLPRRQHNTSRPQNVTRSLWLPEKEESK-DQYSYKKKVIMEGLLERNHQR 270


>ref|XP_002326105.1| predicted protein [Populus trichocarpa] gi|222862980|gb|EEF00487.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
 Frame = -1

Query: 582 LKQISNNLFESSKQSKTKEITRN-------RASSSSTNGXXXXXXXXXXLIFWGRLCAIV 424
           +K  S++L E+ K SK K+ + N       +A +   +            I WG+LCAI 
Sbjct: 155 VKSCSSSLSETRKMSKIKKNSTNPNQELEFKARNMDKSDIYLLLMSFTVTILWGKLCAIF 214

Query: 423 CTSTWIYFGPIRR--KCEDEEVMVTKAEGEELEMGSR-EYKKRVIMEGILERNHSR 265
           C   W+YF P RR      E V  +    E+ E   +  YKK+VIM G+LER H R
Sbjct: 215 CNLIWLYFLPRRRHNTSRPENVRTSLWLPEKKESKDQYYYKKKVIMAGLLERKHQR 270


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